Data search
Results for MligTC455_28002
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28002 | 77 | 1.59 | Mlig455_063768 | Neo: - Age: Up-Down-Up |
SIDT2 | Mlig455_063768 {REF} {Length: 4153} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=678.2]; Ceramidase [PF05875.14, score=18.8]} {Human: ENSG00000149577, SIDT2, SID1 transmembrane family member 2, [Score=530, Expect=2e-175]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=458, Expect=5e-148]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [RH, Score=294, Expect=3e-87]} {Smed: dd_Smed_v6_6063_0_1, dd_Smed_v6_6063_0_1, [RH, Score=519, Expect=2e-172]} {RNA1509_19245} {RNA1310_3733} {RNA815_12922} |
Cumulative graph for MligTC455_28002
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.103 | 1.528 | 0.60249 | 1.00000 | |
| RegionR2 | 0.939 | 1.528 | 0.36404 | 0.75871 | |
| RegionR3 | 0.281 | 1.528 | 0.72779 | 1.00000 | |
| RegionR4 | -2.953 | 1.528 | 0.00916 | 0.05719 | |
| RegionR5 | -2.103 | 1.528 | 0.01249 | 0.06803 | |
| RegionR6 | 0.307 | 1.528 | 0.69473 | 1.00000 | |
| RegionR7 | 2.034 | 1.528 | 0.02974 | 0.32792 | |
| RegionR8 | 0.392 | 1.528 | 0.78358 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.414 | 1.528 | 0.48790 | 1.00000 | |
| RegenerationR2 | -0.978 | 1.528 | 0.30609 | 0.74666 | |
| RegenerationR3 | 0.497 | 1.528 | 0.58454 | 0.90051 | |
| RegenerationR4 | 1.334 | 1.528 | 0.24695 | 0.69496 | |
| RegenerationR5 | 0.695 | 1.528 | 0.49485 | 0.85589 | |
| RegenerationR6 | -1.713 | 1.528 | 0.16607 | 0.49674 | |
| RegenerationBL | -4.632 | 1.528 | 0.07080 | 0.30973 | |
| RegenerationTP | 0.133 | 1.528 | 0.90632 | 1.00000 |
Genes with expression patterns similar to MligTC455_28002
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28002 | 77 | 1.59 | Mlig455_063768 | Neo: - Age: Up-Down-Up |
SIDT2 | 5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_063768 {REF} {Length: 4153} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=678.2]; Ceramidase [PF05875.14, score=18.8]} {Human: ENSG00000149577, SIDT2, SID1 transmembrane family member 2, [Score=530, Expect=2e-175]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=458, Expect=5e-148]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [RH, Score=294, Expect=3e-87]} {Smed: dd_Smed_v6_6063_0_1, dd_Smed_v6_6063_0_1, [RH, Score=519, Expect=2e-172]} {RNA1509_19245} {RNA1310_3733} {RNA815_12922} |
| 2. | MligTC455_34010 | 204 | 4.26 | Mlig455_024028, Mlig455_024093 | Neo: - Age: Up-Down-Down |
KCNC1 | 1.735 | - | - | 0.952 | - | - | 0.783 | Mlig455_024028 {REF} {Length: 3896} {Pfam: Ion transport protein [PF00520.33, score=148.2]; BTB/POZ domain [PF02214.24, score=101.1]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=1e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=5e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=408, Expect=1e-132]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00004793, shw-3, SHaW family of potassium channels; Voltage-gated K+ channel isoform 1, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=689, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.2} {RNA815_13734} Mlig455_024093 {REF} {Length: 3992} {Pfam: Ion transport protein [PF00520.33, score=148.2]; BTB/POZ domain [PF02214.24, score=101.1]; Ion channel [PF07885.18, score=44.0]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=426, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=424, Expect=2e-140]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=407, Expect=1e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=426, Expect=5e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=408, Expect=1e-132]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00004793, shw-3, SHaW family of potassium channels; Voltage-gated K+ channel isoform 1, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=689, Expect=0.0]} {RNA1509_54375} {RNA1310_15083.2} {RNA815_13734} |
| 3. | MligTC455_05052 | 39 | 0.82 | Mlig455_060041 | Neo: - Age: - |
1.679 | - | - | 0.960 | - | 0.719 | - | Mlig455_060041 {REF} {Length: 2112} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=44.4]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=24.5]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=18.7]} {Celegans: WBGene00015323, frpr-1, Probable G-protein coupled receptor frpr-1, [Score=53.9, Expect=8e-08]} {Smed: dd_Smed_v6_19397_0_1, dd_Smed_v6_19397_0_1, [Score=89.0, Expect=3e-19]} {RNA1310_29651} {RNA815_43873} | |
| 4. | MligTC455_54115 | 1122 | 23.38 | Mlig455_046735, Mlig455_046741, Mlig455_046761, Mlig455_046824 | Neo: - Age: Up-Down-Down Region-specific R8: 6.242 Region-enriched R8: 6.213/0.00000 Regeneration-downregulated BL: -5.695 Regeneration-depleted BL: -5.695 |
AVIL, VIL1 | 0.976 | - | - | - | - | 0.976 | - | Mlig455_046735 {REF} {Length: 3237} {TRANSSPLICED} {Pfam: Gelsolin repeat [PF00626.24, score=254.9]; Villin headpiece domain [PF02209.21, score=62.4]} {Human: ENSG00000135407, AVIL, advillin, [RH, Score=668, Expect=0.0]; ENSG00000127831, VIL1, villin 1, [RH, Score=656, Expect=0.0]} {Mouse: ENSMUSG00000025432, Avil, advillin, [RH, Score=655, Expect=0.0]} {Dmel: FBgn0010225, Gel, Gelsolin, [Score=339, Expect=4e-104]} {Celegans: WBGene00001443, fli-1, Protein flightless-1 homolog, [Score=157, Expect=3e-39]} {Smed: dd_Smed_v6_1215_0_1, dd_Smed_v6_1215_0_1, [Score=157, Expect=4e-42]} {RNA1509_17120} {RNA1310_1438.1} {RNA815_2416.1} Mlig455_046741 {REF} {Length: 3667} {Pfam: Gelsolin repeat [PF00626.24, score=257.0]; Villin headpiece domain [PF02209.21, score=62.3]} {Human: ENSG00000135407, AVIL, advillin, [RH, Score=690, Expect=0.0]; ENSG00000127831, VIL1, villin 1, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000025432, Avil, advillin, [RH, Score=681, Expect=0.0]; ENSMUSG00000026175, Vil1, villin 1, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0010225, Gel, Gelsolin, [Score=362, Expect=4e-113]} {Celegans: WBGene00010593, gsnl-1, Gelsolin-like protein 1, [Score=196, Expect=2e-54]} {Smed: dd_Smed_v6_929_0_1, dd_Smed_v6_929_0_1, [Score=179, Expect=1e-49]} {RNA1509_17120} {RNA1310_1438.1} {RNA815_5185} Mlig455_046761 {REF} {Length: 1969} {Pfam: Gelsolin repeat [PF00626.24, score=108.4]; Villin headpiece domain [PF02209.21, score=61.9]} {Human: ENSG00000127831, VIL1, villin 1, [Score=389, Expect=1e-130]; ENSG00000135407, AVIL, advillin, [Score=378, Expect=7e-123]} {Mouse: ENSMUSG00000026175, Vil1, villin 1, [Score=375, Expect=1e-121]; ENSMUSG00000025432, Avil, advillin, [Score=359, Expect=1e-115]} {Dmel: FBgn0003187, qua, quail, [Score=169, Expect=3e-45]} {Celegans: WBGene00010593, gsnl-1, Gelsolin-like protein 1, [Score=102, Expect=2e-23]} {Smed: dd_Smed_v6_1673_0_1, dd_Smed_v6_1673_0_1, [Score=104, Expect=2e-24]} {RNA1509_17120} {RNA1310_1438.1} {RNA815_2416.1} Mlig455_046824 {REF} {Length: 3159} {Pfam: Gelsolin repeat [PF00626.24, score=257.2]; Villin headpiece domain [PF02209.21, score=63.9]} {Human: ENSG00000135407, AVIL, advillin, [RH, Score=691, Expect=0.0]; ENSG00000127831, VIL1, villin 1, [RH, Score=674, Expect=0.0]} {Mouse: ENSMUSG00000025432, Avil, advillin, [RH, Score=682, Expect=0.0]; ENSMUSG00000026175, Vil1, villin 1, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0010225, Gel, Gelsolin, [Score=365, Expect=3e-114]} {Celegans: WBGene00010593, gsnl-1, Gelsolin-like protein 1, [Score=192, Expect=3e-53]} {Smed: dd_Smed_v6_929_0_1, dd_Smed_v6_929_0_1, [Score=179, Expect=1e-49]} {RNA1509_17120} {RNA1310_1438.1} {RNA815_5185} |
| 5. | MligTC455_25484 | 379 | 7.9 | Mlig455_027120 | Neo: - Age: Up-Down-Down |
GABBR1 | 0.974 | - | - | - | - | 0.974 | - | Mlig455_027120 {REF} {Length: 4409} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=189.7]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=169.1]; Periplasmic binding protein [PF13458.8, score=48.7]} {Human: ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=592, Expect=0.0]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=592, Expect=0.0]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=592, Expect=0.0]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=592, Expect=0.0]; ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=592, Expect=0.0]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=592, Expect=0.0]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=592, Expect=0.0]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [RH, Score=590, Expect=0.0]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [RH, Score=665, Expect=0.0]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [RH, Score=588, Expect=0.0]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [RH, Score=632, Expect=0.0]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973} |
| 6. | MligTC455_38543 | 146 | 3.03 | Mlig455_017595 | Neo: - Age: - Region-enriched R3: 2.925/0.03259 |
0.971 | - | - | - | - | 0.971 | - | Mlig455_017595 {REF} {Length: 1878} {RNA1310_40211} {RNA815_8698} | |
| 7. | MligTC455_37666 | 41 | 0.85 | Mlig455_036220, Mlig455_054131 | Neo: - Age: - |
0.97 | - | - | 0.970 | - | - | - | Mlig455_036220 {REF} {Length: 3163} {NoTransDecoderORF} {RNA1509_35447} {RNA1310_49586} {RNA815_15165} Mlig455_054131 {REF} {Length: 674} {NoTransDecoderORF} {RNA1310_49586} |
|
| 8. | MligTC455_27189 | 32 | 0.67 | Mlig455_047567 | Neo: Irradiation |
RIOX1 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_047567 {REF} {Length: 1998} {TRANSSPLICED} {Pfam: Cupin superfamily protein [PF08007.14, score=211.7]; Cupin-like domain [PF13621.8, score=26.8]} {Human: ENSG00000170468, RIOX1, ribosomal oxygenase 1, [RH, Score=400, Expect=3e-131]} {Mouse: ENSMUSG00000046791, Riox1, ribosomal oxygenase 1, [RH, Score=396, Expect=2e-130]} {Dmel: FBgn0266570, CG2982, [RH, Score=330, Expect=1e-104]} {Celegans: WBGene00020902, jmjc-1, Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, [RH, Score=272, Expect=9e-82]} {RNA1509_12525} {RNA1310_13539} {RNA815_7796} |
| 9. | MligTC455_28126 | 94 | 1.95 | Mlig455_036970 | Neo: - Age: - |
0.968 | - | - | 0.968 | - | - | - | Mlig455_036970 {REF} {Length: 3032} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1} | |
| 10. | MligTC455_50017 | 90 | 1.87 | Mlig455_001478 | Neo: - Age: - Region-enriched R7: 3.044/0.02490 |
PLEKHG5 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_001478 {REF} {Length: 2809} {Pfam: RhoGEF domain [PF00621.22, score=86.5]} {Human: ENSG00000171680, PLEKHG5, pleckstrin homology and RhoGEF domain containing G5, [RH, Score=192, Expect=1e-51]} {Mouse: ENSMUSG00000039713, Plekhg5, pleckstrin homology domain containing, family G (with RhoGef domain) member 5, [Score=187, Expect=3e-50]} {Dmel: FBgn0261556, CG42674, [Score=149, Expect=1e-37]} {Celegans: WBGene00006476, rhgf-2, RHGF-2; RHo Guanine nucleotide exchange Factor, [RH, Score=125, Expect=3e-30]} {Smed: dd_Smed_v6_10072_0_1, dd_Smed_v6_10072_0_1, [RH, Score=167, Expect=2e-44]} {RNA1509_28263} {RNA1310_7368.1} {RNA815_16841} |
| 11. | MligTC455_04377 | 197 | 4.1 | Mlig455_060376 | Neo: - Age: - |
0.961 | - | - | 0.961 | - | - | - | Mlig455_060376 {REF} {Length: 813} {NoTransDecoderORF} {RNA1310_51021} {RNA815_31361} | |
| 12. | MligTC455_48368 | 155 | 3.24 | Mlig455_012284 | Neo: - Age: Down-Up-Down |
TMEM17 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_012284 {REF} {Length: 2954} {TRANSSPLICED} {Pfam: Predicted membrane protein [PF09799.11, score=76.1]} {Human: ENSG00000186889, TMEM17, transmembrane protein 17, [RH, Score=68.6, Expect=1e-13]} {Mouse: ENSMUSG00000049904, Tmem17, transmembrane protein 17, [RH, Score=74.3, Expect=6e-16]} {Celegans: WBGene00022733, tmem-17, TMEM (Human TransMEMbrane protein) homolog, [RH, Score=53.1, Expect=6e-09]} {Smed: dd_Smed_v6_10264_0_1, dd_Smed_v6_10264_0_1, [RH, Score=157, Expect=4e-48]} {RNA1509_27396, RNA1509_32449, RNA1509_50865, RNA1509_54923} {RNA1310_37391.1, RNA1509_27396, RNA1509_32449, RNA1509_50865, RNA1509_54923} {RNA1509_27396, RNA1509_32449, RNA1509_50865, RNA1509_54923, RNA815_18787} |
| 13. | MligTC455_28296 | 28005 | 583.44 | Mlig455_034885 | Neo: - Age: - Region-enriched R4: 1.466/0.03430 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_034885 {REF} {Length: 23} {TRANSSPLICED} {NoTransDecoderORF} | |
| 14. | MligTC455_47590 | 22 | 0.46 | Mlig455_017675, Mlig455_053765 | Neo: - Age: - |
LRRC74A | 0.953 | - | - | 0.953 | - | - | - | Mlig455_017675 {REF} {Length: 3797} {Pfam: Leucine Rich repeat [PF13516.8, score=47.9]; EF-hand domain pair [PF13499.8, score=29.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF00036.34, score=28.6]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=143, Expect=3e-36]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=142, Expect=5e-36]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [Score=50.4, Expect=5e-07]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=169, Expect=4e-45]} {RNA1310_50089} Mlig455_053765 {REF} {Length: 3797} {Pfam: Leucine Rich repeat [PF13516.8, score=47.9]; EF-hand domain pair [PF13499.8, score=29.1]; EF-hand domain [PF13405.8, score=28.8]; EF hand [PF00036.34, score=28.6]; EF-hand domain pair [PF13833.8, score=18.6]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=143, Expect=3e-36]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=142, Expect=5e-36]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [Score=50.4, Expect=5e-07]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=169, Expect=4e-45]} {RNA1310_50089} |
| 15. | MligTC455_41060 | 20 | 0.42 | Mlig455_066706 | Neo: - Age: logFC(26M/2M)=0.922 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_066706 {REF} {Length: 6963} {TRANSSPLICED} {Pfam: DB module [PF01682.21, score=136.6]; Fibronectin type III domain [PF00041.23, score=93.7]; Immunoglobulin domain [PF13927.8, score=66.7]; Immunoglobulin domain [PF13895.8, score=54.5]; Immunoglobulin I-set domain [PF07679.18, score=41.2]; Immunoglobulin domain [PF00047.27, score=32.3]; Immunoglobulin V-set domain [PF07686.19, score=24.7]} {Dmel: FBgn0036454, CG17839, [RH, Score=94.7, Expect=5e-19]} {Celegans: WBGene00007736, igdb-2, Ig-like and fibronectin type-III domain-containing protein 2, [RH, Score=113, Expect=1e-24]} {RNA1509_1506} {RNA1310_657} {RNA815_714} |