TomoSeq data search

Data search

Results for MligTC455_28020

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28020	16092	335.25	Mlig455_005404	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.792		Mlig455_005404 {REF} {Length: 171} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_6853}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_28020

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.702	8.39	0.48181	1.00000
RegionR2	0.075	8.39	0.93203	1.00000
RegionR3	-0.854	8.39	0.35170	0.88697
RegionR4	-0.825	8.39	0.37197	0.69543
RegionR5	0.331	8.39	0.67473	1.00000
RegionR6	-0.059	8.39	0.94223	1.00000
RegionR7	0.802	8.39	0.28836	0.92215
RegionR8	-0.171	8.39	0.83496	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.203	8.39	0.34290	1.00000
RegenerationR2	-0.383	8.39	0.73459	0.96746
RegenerationR3	0.555	8.39	0.59892	0.90756
RegenerationR4	1.284	8.39	0.25728	0.70526
RegenerationR5	-0.146	8.39	0.89807	1.00000
RegenerationR6	0.621	8.39	0.57112	0.85235
RegenerationBL	0.491	8.39	0.59962	0.94697
RegenerationTP	1.371	8.39	0.17894	0.61422

Genes with expression patterns similar to MligTC455_28020

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28020	16092	335.25	Mlig455_005404	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.792		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005404 {REF} {Length: 171} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_6853}
2.	MligTC455_28015	16298	339.54	Mlig455_005389	Neo: - Age: Down-Down-Down, logFC(26M/2M)=2.185		5.994	1.000	1.000	0.996	0.998	1.000	1.000	Mlig455_005389 {REF} {Length: 144} {NoTransDecoderORF} {RNA1509_1332} {RNA1310_851.1} {RNA815_6853}
3.	MligTC455_28016	16397	341.6	Mlig455_005414	Neo: - Age: Down-Down-Down, logFC(26M/2M)=1.663		5.993	1.000	1.000	0.996	0.998	1.000	0.999	Mlig455_005414 {REF} {Length: 261} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_6853}
4.	MligTC455_28021	15434	321.53	Mlig455_042306	Neo: - Age: Down-Down-Up, logFC(26M/2M)=5.788		5.973	0.999	0.999	1.000	0.997	0.994	0.984	Mlig455_042306 {REF} {Length: 55} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1332} {RNA1310_851.1} {RNA815_6853}
5.	MligTC455_28014	17852	371.91	Mlig455_005376	Neo: - Age: -		5.941	0.997	0.999	0.996	0.997	0.989	0.963	Mlig455_005376 {REF} {Length: 360} {NoTransDecoderORF} {RNA1509_117, RNA1509_1332, RNA1509_18474, RNA1509_197, RNA1509_2785, RNA1509_3, RNA1509_6043} {RNA1310_851.1, RNA1509_117, RNA1509_1332, RNA1509_18474, RNA1509_197, RNA1509_2785, RNA1509_6043} {RNA1509_117, RNA1509_1332, RNA1509_18474, RNA1509_197, RNA1509_2785, RNA1509_6043, RNA815_6853}
6.	MligTC455_28037	11457	238.68	Mlig455_005415	Neo: Int S/G2/M Age: -		3.376	0.762	0.888	-	-	0.767	0.959	Mlig455_005415 {REF} {Length: 322} {TRANSSPLICED} {RNA1509_1780, RNA1509_6308} {RNA1310_8217, RNA1509_6308} {RNA1509_6308, RNA815_80.1}
7.	MligTC455_28036	11090	231.03	Mlig455_005406	Neo: - Age: Down-Down-Up, logFC(26M/2M)=1.726		3.302	0.756	0.887	-	-	0.703	0.956	Mlig455_005406 {REF} {Length: 318} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1780} {RNA1310_8217} {RNA815_80.1}
8.	MligTC455_27159	19037	396.6	Mlig455_005403	Neo: - Age: Down-Down-Up		2.674	-	0.897	0.826	-	-	0.951	Mlig455_005403 {REF} {Length: 429} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
9.	MligTC455_27156	4417	92.01	Mlig455_005373	Neo: - Age: -		2.62	-	0.919	-	0.741	-	0.960	Mlig455_005373 {REF} {Length: 439} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
10.	MligTC455_27158	508	10.58	Mlig455_042319	Neo: - Age: -		1.834	-	0.880	-	-	-	0.954	Mlig455_042319 {REF} {Length: 272} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
11.	MligTC455_28040	346	7.21	Mlig455_005430	Neo: - Age: Down-Down-Up		1.711	-	0.752	-	-	-	0.959	Mlig455_005430 {REF} {Length: 2079} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=57.4, Expect=7e-10]} {RNA1509_22337} {RNA1310_54194} {RNA815_6853}
12.	MligTC455_14875	61	1.26	Mlig455_050722	Neo: Irradiation Age: -		1.681	-	-	-	-	0.727	0.954	Mlig455_050722 {REF} {Length: 1509} {TRANSSPLICED} {RNA1509_16183, RNA1509_44772, RNA1509_52447} {RNA1310_47665, RNA1509_16183, RNA1509_44772, RNA1509_52447} {RNA1509_16183, RNA1509_44772, RNA1509_52447, RNA815_28757}
13.	MligTC455_07706	27	0.57	Mlig455_001501, Mlig455_001519	Neo: - Age: -	DCX	0.971	-	-	-	-	-	0.971	Mlig455_001501 {REF} {Length: 1767} {Pfam: Doublecortin [PF03607.19, score=129.0]} {Human: ENSG00000077279, DCX, doublecortin, [RH, Score=194, Expect=3e-58]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [RH, Score=196, Expect=5e-59]} {Dmel: FBgn0261387, CG17528, [Score=160, Expect=3e-43]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=159, Expect=3e-43]} {Smed: dd_Smed_v6_13093_0_1, dd_Smed_v6_13093_0_1, [Score=94.0, Expect=7e-21]} Mlig455_001519 {REF} {Length: 1525} {Pfam: Doublecortin [PF03607.19, score=127.4]} {Human: ENSG00000077279, DCX, doublecortin, [Score=168, Expect=4e-49]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=169, Expect=7e-50]} {Dmel: FBgn0261387, CG17528, [Score=127, Expect=1e-32]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=134, Expect=3e-35]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=49.3, Expect=1e-06]}
14.	MligTC455_16857	32	0.66	Mlig455_003087	Neo: - Age: - Region-enriched R6: 6.960/0.04695		0.962	-	-	-	-	-	0.962	Mlig455_003087 {REF} {Length: 2468} {RNA1509_54585} {RNA1310_42392} {RNA815_12871}
15.	MligTC455_35736	11	0.23	Mlig455_062915	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_062915 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_135035}
16.	MligTC455_21965	18	0.37	Mlig455_016183	Neo: - Age: Up-Down-Down		0.958	-	-	-	-	-	0.958	Mlig455_016183 {REF} {Length: 3827} {Pfam: THAP domain [PF05485.14, score=65.1]; Transposase protein [PF12017.10, score=22.9]} {RNA1509_42327} {RNA1310_17881} {RNA815_37320}
17.	MligTC455_01232	74	1.55	Mlig455_016220	Neo: - Age: - Region-enriched R6: 7.177/0.02790		0.957	-	-	-	-	-	0.957	Mlig455_016220 {REF} {Length: 1235} {RNA1509_51755, RNA1509_9784} {RNA1310_25050.2, RNA1509_9784} {RNA1509_9784, RNA815_12951}
18.	MligTC455_01233	64	1.33	Mlig455_054264	Neo: - Age: - Region-enriched R6: 7.099/0.03616		0.957	-	-	-	-	-	0.957	Mlig455_054264 {REF} {Length: 486} {RNA1509_51755} {RNA1310_25050.1} {RNA815_12951}
19.	MligTC455_03579	53	1.11	Mlig455_022179	Neo: - Age: - Region-enriched R6: 6.609/0.00361		0.957	-	-	-	-	-	0.957	Mlig455_022179 {REF} {Length: 568} {RNA1509_23989} {RNA1310_1198.1} {RNA815_345.1}
20.	MligTC455_05559	14	0.3	Mlig455_029787	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_029787 {REF} {Length: 663} {NoTransDecoderORF} {RNA1310_33708} {RNA815_18649}
21.	MligTC455_13748	8	0.18	Mlig455_053592	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_053592 {REF} {Length: 1051} {NoTransDecoderORF} {RNA1509_2330} {RNA1310_37520} {RNA815_22367}
22.	MligTC455_11780	35	0.73	Mlig455_023335	Neo: - Age: Down-Up-Down Regeneration-enriched R4: 10.634 Regeneration-enriched R3: 10.602 Regeneration-enriched R6: 8.985 Regeneration-enriched R5: 6.941	PDE9A	0.952	-	-	-	-	-	0.952	Mlig455_023335 {REF} {Length: 3554} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=286.3]} {Human: ENSG00000160191, PDE9A, phosphodiesterase 9A, [Score=544, Expect=0.0]} {Mouse: ENSMUSG00000041119, Pde9a, phosphodiesterase 9A, [Score=549, Expect=0.0]} {Dmel: FBgn0259171, Pde9, Phosphodiesterase 9, [Score=311, Expect=8e-92]} {Celegans: WBGene00020114, pde-4, Probable 3',5'-cyclic phosphodiesterase pde-4, [Score=163, Expect=4e-43]} {Smed: dd_Smed_v6_13304_0_1, dd_Smed_v6_13304_0_1, [Score=298, Expect=3e-93]} {RNA1310_14570} {RNA815_20478}