Data search


search
Exact
Search

Results for MligTC455_28040

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28040 346 7.21 Mlig455_005430

Neo: -

Age: Down-Down-Up

Mlig455_005430 {REF} {Length: 2079} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=57.4, Expect=7e-10]} {RNA1509_22337} {RNA1310_54194} {RNA815_6853}

Cumulative graph for MligTC455_28040

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.534 3.187 0.75163 1.00000
RegionR2 -0.317 3.187 0.69866 1.00000
RegionR3 -0.596 3.187 0.42289 0.94550
RegionR4 -0.278 3.187 0.73553 1.00000
RegionR5 0.749 3.187 0.22933 0.53542
RegionR6 -0.435 3.187 0.56133 1.00000
RegionR7 0.224 3.187 0.79549 1.00000
RegionR8 0.118 3.187 0.91346 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.568 3.187 0.39485 1.00000
RegenerationR2 0.075 3.187 0.92549 1.00000
RegenerationR3 0.807 3.187 0.34029 0.76433
RegenerationR4 1.255 3.187 0.12088 0.52966
RegenerationR5 -0.003 3.187 0.98747 1.00000
RegenerationR6 2.733 3.187 0.00127 0.03931
RegenerationBL 0.646 3.187 0.45522 0.82236
RegenerationTP 0.171 3.187 0.86611 1.00000


Genes with expression patterns similar to MligTC455_28040

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28040 346 7.21 Mlig455_005430

Neo: -

Age: Down-Down-Up

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_005430 {REF} {Length: 2079} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=57.4, Expect=7e-10]} {RNA1509_22337} {RNA1310_54194} {RNA815_6853}
2. MligTC455_28038 492 10.25 Mlig455_005405

Neo: -

Age: Down-Down-Up

3.335 - 0.899 0.753 0.731 - 0.952 Mlig455_005405 {REF} {Length: 345} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3, RNA1509_43189} {RNA1310_851.1, RNA1509_43189} {RNA1509_43189, RNA815_80.2}
3. MligTC455_27179 1219 25.39 Mlig455_005503

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.871

1.923 - 0.941 - - - 0.982 Mlig455_005503 {REF} {Length: 669} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
4. MligTC455_27177 1315 27.39 Mlig455_005375

Neo: -

Age: Down-Up-Up

1.919 - 0.932 - - - 0.987 Mlig455_005375 {REF} {Length: 484} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
5. MligTC455_27183 1888 39.34 Mlig455_005388, Mlig455_005412

Neo: -

Age: -

1.907 - 0.932 - - - 0.975

Mlig455_005388 {REF} {Length: 49} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_4800.2}

Mlig455_005412 {REF} {Length: 35} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_4800.2}
6. MligTC455_27180 1378 28.71 Mlig455_061198

Neo: -

Age: Up-Up-Up

1.846 - 0.859 - - - 0.987 Mlig455_061198 {REF} {Length: 1211} {NoTransDecoderORF} {RNA1509_3, RNA1509_60} {RNA1310_851.1, RNA1509_60} {RNA1509_60, RNA815_80.1}
7. MligTC455_28037 11457 238.68 Mlig455_005415

Neo: Int S/G2/M

Age: -

1.783 - 0.808 - - - 0.975 Mlig455_005415 {REF} {Length: 322} {TRANSSPLICED} {RNA1509_1780, RNA1509_6308} {RNA1310_8217, RNA1509_6308} {RNA1509_6308, RNA815_80.1}
8. MligTC455_28036 11090 231.03 Mlig455_005406

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=1.726

1.777 - 0.803 - - - 0.974 Mlig455_005406 {REF} {Length: 318} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1780} {RNA1310_8217} {RNA815_80.1}
9. MligTC455_27159 19037 396.6 Mlig455_005403

Neo: -

Age: Down-Down-Up

1.74 - 0.756 - - - 0.984 Mlig455_005403 {REF} {Length: 429} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
10. MligTC455_27158 508 10.58 Mlig455_042319

Neo: -

Age: -

1.736 0.758 - - - - 0.978 Mlig455_042319 {REF} {Length: 272} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
11. MligTC455_27138 2818 58.71 Mlig455_005410

Neo: -

Age: Down-Down-Down

1.734 - 0.783 - - - 0.951 Mlig455_005410 {REF} {Length: 160} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_12443, RNA1509_14192, RNA1509_63} {RNA1310_15760, RNA1509_14192, RNA1509_63} {RNA1509_14192, RNA1509_63, RNA815_80.1}
12. MligTC455_28016 16397 341.6 Mlig455_005414

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=1.663

1.713 - 0.752 - - - 0.961 Mlig455_005414 {REF} {Length: 261} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_6853}
13. MligTC455_28015 16298 339.54 Mlig455_005389

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=2.185

1.712 - 0.750 - - - 0.962 Mlig455_005389 {REF} {Length: 144} {NoTransDecoderORF} {RNA1509_1332} {RNA1310_851.1} {RNA815_6853}
14. MligTC455_28020 16092 335.25 Mlig455_005404

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.792

1.711 - 0.752 - - - 0.959 Mlig455_005404 {REF} {Length: 171} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_6853}
15. MligTC455_27156 4417 92.01 Mlig455_005373

Neo: -

Age: -

1.704 - 0.725 - - - 0.979 Mlig455_005373 {REF} {Length: 439} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
16. MligTC455_27160 17867 372.23 Mlig455_005501

Neo: -

Age: Down-Down-Up

1.69 - 0.706 - - - 0.984 Mlig455_005501 {REF} {Length: 83} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
17. MligTC455_05559 14 0.3 Mlig455_029787

Neo: -

Age: -

0.978 - - - - - 0.978 Mlig455_029787 {REF} {Length: 663} {NoTransDecoderORF} {RNA1310_33708} {RNA815_18649}
18. MligTC455_49262 252 5.25 Mlig455_012820

Neo: -

Age: Down-Down-Up

0.971 - - - - - 0.971 Mlig455_012820 {REF} {Length: 1554} {RNA1509_1387, RNA1509_23679, RNA1509_7656} {RNA1310_19151, RNA1509_1387, RNA1509_23679} {RNA1509_1387, RNA1509_23679, RNA815_4929.1}
19. MligTC455_35736 11 0.23 Mlig455_062915

Neo: -

Age: -

0.967 - - - - - 0.967 Mlig455_062915 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_135035}
20. MligTC455_52150 1796 37.43 Mlig455_017153, Mlig455_019691

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.317/0.00005

Regeneration-enriched R6: 1.860
Regeneration-enriched BL: 1.487

NFYB 0.967 - - - - 0.967 -

Mlig455_017153 {REF} {Length: 1341} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=92.1]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=24.4]} {Human: ENSG00000120837, NFYB, nuclear transcription factor Y subunit beta, [RH, Score=157, Expect=2e-48]} {Mouse: ENSMUSG00000020248, Nfyb, nuclear transcription factor-Y beta, [RH, Score=159, Expect=2e-49]} {Dmel: FBgn0032816, Nf-YB, Nuclear factor Y-box B, [RH, Score=137, Expect=2e-41]} {Celegans: WBGene00021132, nfyb-1, Nuclear transcription Factor Y, B (Beta) subunit, [RH, Score=126, Expect=8e-35]} {Smed: dd_Smed_v6_2532_0_1, dd_Smed_v6_2532_0_1, [RH, Score=159, Expect=2e-49]} {RNA1509_23597} {RNA1310_12347} {RNA815_3697}

Mlig455_019691 {REF} {Length: 1271} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=92.1]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=24.5]} {Human: ENSG00000120837, NFYB, nuclear transcription factor Y subunit beta, [RH, Score=158, Expect=1e-48]} {Mouse: ENSMUSG00000020248, Nfyb, nuclear transcription factor-Y beta, [RH, Score=159, Expect=2e-49]} {Dmel: FBgn0032816, Nf-YB, Nuclear factor Y-box B, [RH, Score=137, Expect=2e-41]} {Celegans: WBGene00021132, nfyb-1, Nuclear transcription Factor Y, B (Beta) subunit, [RH, Score=126, Expect=6e-35]} {Smed: dd_Smed_v6_2532_0_1, dd_Smed_v6_2532_0_1, [RH, Score=160, Expect=6e-50]} {RNA1509_21762, RNA1509_23597, RNA1509_4385} {RNA1310_12347, RNA1509_21762, RNA1509_23597, RNA1509_4385} {RNA1509_21762, RNA1509_23597, RNA1509_4385, RNA815_3697}
21. MligTC455_03579 53 1.11 Mlig455_022179

Neo: -

Age: -

Region-enriched R6: 6.609/0.00361

0.964 - - - - - 0.964 Mlig455_022179 {REF} {Length: 568} {RNA1509_23989} {RNA1310_1198.1} {RNA815_345.1}
22. MligTC455_16857 32 0.66 Mlig455_003087

Neo: -

Age: -

Region-enriched R6: 6.960/0.04695

0.963 - - - - - 0.963 Mlig455_003087 {REF} {Length: 2468} {RNA1509_54585} {RNA1310_42392} {RNA815_12871}
23. MligTC455_01232 74 1.55 Mlig455_016220

Neo: -

Age: -

Region-enriched R6: 7.177/0.02790

0.962 - - - - - 0.962 Mlig455_016220 {REF} {Length: 1235} {RNA1509_51755, RNA1509_9784} {RNA1310_25050.2, RNA1509_9784} {RNA1509_9784, RNA815_12951}
24. MligTC455_07617 64 1.34 Mlig455_005418

Neo: -

Age: -

0.962 - - - - - 0.962 Mlig455_005418 {REF} {Length: 276} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23004} {RNA1310_2481} {RNA815_1756}
25. MligTC455_01233 64 1.33 Mlig455_054264

Neo: -

Age: -

Region-enriched R6: 7.099/0.03616

0.961 - - - - - 0.961 Mlig455_054264 {REF} {Length: 486} {RNA1509_51755} {RNA1310_25050.1} {RNA815_12951}
26. MligTC455_07706 27 0.57 Mlig455_001501, Mlig455_001519

Neo: -

Age: -

DCX 0.959 - - - - - 0.959

Mlig455_001501 {REF} {Length: 1767} {Pfam: Doublecortin [PF03607.19, score=129.0]} {Human: ENSG00000077279, DCX, doublecortin, [RH, Score=194, Expect=3e-58]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [RH, Score=196, Expect=5e-59]} {Dmel: FBgn0261387, CG17528, [Score=160, Expect=3e-43]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=159, Expect=3e-43]} {Smed: dd_Smed_v6_13093_0_1, dd_Smed_v6_13093_0_1, [Score=94.0, Expect=7e-21]}

Mlig455_001519 {REF} {Length: 1525} {Pfam: Doublecortin [PF03607.19, score=127.4]} {Human: ENSG00000077279, DCX, doublecortin, [Score=168, Expect=4e-49]} {Mouse: ENSMUSG00000031285, Dcx, doublecortin, [Score=169, Expect=7e-50]} {Dmel: FBgn0261387, CG17528, [Score=127, Expect=1e-32]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=134, Expect=3e-35]} {Smed: dd_Smed_v6_10315_0_2, dd_Smed_v6_10315_0_2, [Score=49.3, Expect=1e-06]}
27. MligTC455_35884 745 15.52 Mlig455_004290, Mlig455_004365

Neo: -

Age: logFC(26M/2M)=2.444

Regeneration-upregulated R6: 5.801

Regeneration-enriched R6: 5.801

0.957 - - - - - 0.957

Mlig455_004290 {REF} {Length: 1080} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=32.6]} {RNA1310_34690.1} {RNA815_14830.2}

Mlig455_004365 {REF} {Length: 1177} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=32.8]} {RNA1310_34690.1} {RNA815_14830.2}
28. MligTC455_06478 123 2.57 Mlig455_018821

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.603

0.956 - - - - - 0.956 Mlig455_018821 {REF} {Length: 1222} {RNA1509_40738, RNA1509_53046} {RNA1310_28380, RNA1509_53046} {RNA1509_53046, RNA815_37540}
29. MligTC455_12837 27 0.56 Mlig455_036353

Neo: -

Age: -

0.956 - - - - - 0.956 Mlig455_036353 {REF} {Length: 543} {NoTransDecoderORF} {RNA1509_16318} {RNA1310_63826} {RNA815_10228}
30. MligTC455_49826 25 0.52 Mlig455_019655, Mlig455_048057

Neo: -

Age: -

0.953 - - - - - 0.953

Mlig455_019655 {REF} {Length: 723} {NoTransDecoderORF} {RNA1310_134460}

Mlig455_048057 {REF} {Length: 437} {NoTransDecoderORF} {RNA1310_134460}
31. MligTC455_54136 7005 145.94 Mlig455_013301

Neo: -

Age: Down-Up-Down

Region-enriched R6: 3.789/0.00000
Region-enriched R2: 3.035/0.00017

0.953 - - - - - 0.953 Mlig455_013301 {REF} {Length: 710} {TRANSSPLICED} {RNA1509_9505} {RNA1310_97465} {RNA815_42935}
32. MligTC455_54137 7016 146.17 Mlig455_050513

Neo: -

Age: -

Region-enriched R6: 3.796/0.00000
Region-enriched R2: 3.038/0.00013

0.953 - - - - - 0.953 Mlig455_050513 {REF} {Length: 989} {TRANSSPLICED} {RNA1509_5526} {RNA1310_45021, RNA1509_5526} {RNA1509_5526, RNA815_19278}
33. MligTC455_11780 35 0.73 Mlig455_023335

Neo: -

Age: Down-Up-Down

Regeneration-enriched R4: 10.634
Regeneration-enriched R3: 10.602
Regeneration-enriched R6: 8.985
Regeneration-enriched R5: 6.941

PDE9A 0.952 - - - - - 0.952 Mlig455_023335 {REF} {Length: 3554} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=286.3]} {Human: ENSG00000160191, PDE9A, phosphodiesterase 9A, [Score=544, Expect=0.0]} {Mouse: ENSMUSG00000041119, Pde9a, phosphodiesterase 9A, [Score=549, Expect=0.0]} {Dmel: FBgn0259171, Pde9, Phosphodiesterase 9, [Score=311, Expect=8e-92]} {Celegans: WBGene00020114, pde-4, Probable 3',5'-cyclic phosphodiesterase pde-4, [Score=163, Expect=4e-43]} {Smed: dd_Smed_v6_13304_0_1, dd_Smed_v6_13304_0_1, [Score=298, Expect=3e-93]} {RNA1310_14570} {RNA815_20478}
34. MligTC455_28475 20 0.42 Mlig455_037653, Mlig455_037663, Mlig455_037768

Neo: -

Age: Up-Down-Down

GHSR 0.951 - - - - - 0.951

Mlig455_037653 {REF} {Length: 1270} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=67.2]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=29.1]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.7]} {Human: ENSG00000121853, GHSR, growth hormone secretagogue receptor, [Score=77.8, Expect=3e-15]} {Mouse: ENSMUSG00000051136, Ghsr, growth hormone secretagogue receptor, [Score=77.4, Expect=4e-15]} {Dmel: FBgn0038140, PK2-R1, Pyrokinin 2 receptor 1, [Score=58.5, Expect=6e-09]} {Celegans: WBGene00008065, npr-18, Neuropeptide receptor 18, [Score=50.4, Expect=1e-06]} {Smed: dd_Smed_v6_14651_0_1, dd_Smed_v6_14651_0_1, [Score=150, Expect=3e-41]} {RNA1310_76317}

Mlig455_037663 {REF} {Length: 2479} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=67.3]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=29.1]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.7]} {Human: ENSG00000121853, GHSR, growth hormone secretagogue receptor, [Score=77.8, Expect=4e-15]} {Mouse: ENSMUSG00000051136, Ghsr, growth hormone secretagogue receptor, [Score=77.4, Expect=4e-15]} {Dmel: FBgn0038140, PK2-R1, Pyrokinin 2 receptor 1, [Score=58.2, Expect=7e-09]} {Celegans: WBGene00008065, npr-18, Neuropeptide receptor 18, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_14651_0_1, dd_Smed_v6_14651_0_1, [Score=150, Expect=3e-41]} {RNA1310_76317}

Mlig455_037768 {REF} {Length: 2883} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=66.4]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=29.1]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.6]} {Human: ENSG00000121853, GHSR, growth hormone secretagogue receptor, [Score=75.1, Expect=3e-14]} {Mouse: ENSMUSG00000051136, Ghsr, growth hormone secretagogue receptor, [Score=74.3, Expect=3e-14]} {Dmel: FBgn0038140, PK2-R1, Pyrokinin 2 receptor 1, [Score=57.8, Expect=1e-08]} {Celegans: WBGene00008065, npr-18, Neuropeptide receptor 18, [Score=51.2, Expect=7e-07]} {Smed: dd_Smed_v6_14651_0_1, dd_Smed_v6_14651_0_1, [Score=151, Expect=1e-41]} {RNA1310_76317}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA