TomoSeq data search

Data search

Results for MligTC455_28030

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28030

4618

96.20

Mlig455_005390

Neo: -

Age: -

Mlig455_005390 {REF} {Length: 1079} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}

Cumulative graph for MligTC455_28030

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.428	6.739	0.55805	1.00000
RegionR2	-0.904	6.739	0.06842	0.31790
RegionR3	0.255	6.739	0.54981	1.00000
RegionR4	1.033	6.739	0.02687	0.12562
RegionR5	0.988	6.739	0.01108	0.06218
RegionR6	0.135	6.739	0.74656	1.00000
RegionR7	-0.277	6.739	0.53395	1.00000
RegionR8	-0.802	6.739	0.13132	0.66343

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.62	6.739	0.14453	0.88425
RegenerationR2	-0.42	6.739	0.41813	0.82613
RegenerationR3	-0.299	6.739	0.56254	0.88995
RegenerationR4	0.144	6.739	0.78945	0.98351
RegenerationR5	-0.769	6.739	0.14508	0.56062
RegenerationR6	0.718	6.739	0.17410	0.50659
RegenerationBL	0.822	6.739	0.07131	0.31126
RegenerationTP	0.568	6.739	0.26725	0.71468

Genes with expression patterns similar to MligTC455_28030

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28030	4618	96.2	Mlig455_005390	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005390 {REF} {Length: 1079} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
2.	MligTC455_29548	1135	23.65	Mlig455_034410, Mlig455_048629, Mlig455_050075	Neo: - Age: - Region-enriched R4: 1.307/0.02685 Region-enriched R5: 1.041/0.01774	GTF2IRD2	1.678	0.723	-	-	-	0.955	-	Mlig455_034410 {REF} {Length: 1013} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=211, Expect=3e-61]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=210, Expect=8e-61]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=189, Expect=1e-53]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=226, Expect=8e-73]} {RNA1509_47691} {RNA1310_5733} {RNA815_33839} Mlig455_048629 {REF} {Length: 4021} {Pfam: Ndr family [PF03096.16, score=181.4]; Domain of unknown function (DUF4371) [PF14291.8, score=35.0]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=288, Expect=7e-84]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=287, Expect=1e-83]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=259, Expect=8e-74]} {Dmel: FBgn0043070, MESK2, Misexpression suppressor of KSR 2, [Score=130, Expect=3e-32]} {Celegans: WBGene00013020, Y48G10A.3, [Score=113, Expect=3e-27]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=227, Expect=1e-68]} {RNA1509_47691} {RNA1310_5733} {RNA815_9919} Mlig455_050075 {REF} {Length: 1013} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=211, Expect=3e-61]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=210, Expect=8e-61]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=189, Expect=1e-53]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=226, Expect=8e-73]} {RNA1509_47691} {RNA1310_5733} {RNA815_33839}
3.	MligTC455_46059	4645	96.77	Mlig455_001372	Neo: - Age: -	UBE2L3	0.967	-	-	-	-	0.967	-	Mlig455_001372 {REF} {Length: 1277} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=142.6]; UEV domain [PF05743.15, score=22.4]} {Human: ENSG00000185651, UBE2L3, ubiquitin conjugating enzyme E2 L3, [RH, Score=228, Expect=1e-77]; ENSG00000236444, UBE2L5, ubiquitin conjugating enzyme E2 L5, [RH, Score=228, Expect=2e-77]} {Mouse: ENSMUSG00000038965, Ube2l3, ubiquitin-conjugating enzyme E2L 3, [RH, Score=228, Expect=1e-77]} {Dmel: FBgn0026316, Ubc10, Ubiquitin conjugating enzyme 10, [RH, Score=219, Expect=2e-74]} {Celegans: WBGene00006713, ubc-18, UBiquitin Conjugating enzyme, [RH, Score=198, Expect=3e-66]} {Smed: dd_Smed_v6_667_0_1, dd_Smed_v6_667_0_1, [RH, Score=226, Expect=2e-77]} {RNA1509_12258} {RNA1310_24858} {RNA815_10525}
4.	MligTC455_46058	4718	98.3	Mlig455_001357	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.305 Region-enriched R5: 1.093/0.00000	UBE2L3	0.962	-	-	-	-	0.962	-	Mlig455_001357 {REF} {Length: 1267} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=142.6]; UEV domain [PF05743.15, score=22.4]} {Human: ENSG00000185651, UBE2L3, ubiquitin conjugating enzyme E2 L3, [RH, Score=228, Expect=1e-77]; ENSG00000236444, UBE2L5, ubiquitin conjugating enzyme E2 L5, [RH, Score=228, Expect=2e-77]} {Mouse: ENSMUSG00000038965, Ube2l3, ubiquitin-conjugating enzyme E2L 3, [RH, Score=228, Expect=1e-77]} {Dmel: FBgn0026316, Ubc10, Ubiquitin conjugating enzyme 10, [RH, Score=219, Expect=2e-74]} {Celegans: WBGene00006713, ubc-18, UBiquitin Conjugating enzyme, [RH, Score=198, Expect=3e-66]} {Smed: dd_Smed_v6_667_0_1, dd_Smed_v6_667_0_1, [RH, Score=226, Expect=2e-77]} {RNA1509_1697} {RNA1310_24858} {RNA815_10525}
5.	MligTC455_35361	1420	29.59	Mlig455_008509	Neo: - Age: -	HDHD5	0.958	-	-	-	-	0.958	-	Mlig455_008509 {REF} {Length: 2717} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=51.4]; HAD-hyrolase-like [PF13242.8, score=33.8]} {Human: ENSG00000069998, HDHD5, haloacid dehalogenase like hydrolase domain containing 5, [Score=287, Expect=1e-92]} {Mouse: ENSMUSG00000058979, Hdhd5, haloacid dehalogenase like hydrolase domain containing 5, [RH, Score=274, Expect=8e-88]} {Celegans: WBGene00019255, H32C10.1, [RH, Score=210, Expect=1e-63]} {Smed: dd_Smed_v6_1170_0_1, dd_Smed_v6_1170_0_1, [RH, Score=425, Expect=3e-147]} {RNA1509_48618, RNA1509_9914} {RNA1310_18496, RNA1509_48618, RNA1509_9914} {RNA1509_48618, RNA1509_9914, RNA815_7610}
6.	MligTC455_45571	861	17.95	Mlig455_014290	Neo: - Age: Down-Down-Up Region-enriched R4: 3.155/0.00000 Region-enriched R3: 2.172/0.00010 Region-enriched R5: 2.084/0.00005 Region-enriched R6: 1.840/0.00926 Regeneration-upregulated BL: 3.314 Regeneration-enriched BL: 3.314	CRYL1	0.957	-	-	-	-	0.957	-	Mlig455_014290 {REF} {Length: 1393} {Pfam: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=151.9]; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain [PF00725.24, score=33.8]} {Human: ENSG00000165475, CRYL1, crystallin lambda 1, [RH, Score=263, Expect=2e-86]} {Mouse: ENSMUSG00000021947, Cryl1, crystallin, lambda 1, [RH, Score=250, Expect=2e-81]} {Dmel: FBgn0030737, CG9914, [RH, Score=276, Expect=1e-91]} {Celegans: WBGene00022130, Y71F9B.9, [RH, Score=238, Expect=8e-77]} {Smed: dd_Smed_v6_1696_0_1, dd_Smed_v6_1696_0_1, [RH, Score=170, Expect=9e-51]} {RNA1509_34725} {RNA1310_23652, RNA1509_34725} {RNA1509_34725, RNA815_8421.1}
7.	MligTC455_50153	477	9.93	Mlig455_061605	Neo: - Age: -	BDH1	0.95	-	-	-	-	0.950	-	Mlig455_061605 {REF} {Length: 1818} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=138.9]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=92.3]; KR domain [PF08659.12, score=19.8]} {Human: ENSG00000161267, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000275544, BDH1, 3-hydroxybutyrate dehydrogenase 1, [Score=170, Expect=5e-49]; ENSG00000025423, HSD17B6, hydroxysteroid 17-beta dehydrogenase 6, [Score=163, Expect=9e-47]} {Mouse: ENSMUSG00000046598, Bdh1, 3-hydroxybutyrate dehydrogenase, type 1, [Score=173, Expect=2e-50]} {Dmel: FBgn0033679, CG8888, [RH, Score=108, Expect=4e-26]} {Celegans: WBGene00000979, dhs-16, 3 beta-hydroxysteroid dehydrogenase dhs-16, [Score=135, Expect=7e-36]} {Smed: dd_Smed_v6_8012_0_1, dd_Smed_v6_8012_0_1, [RH, Score=147, Expect=5e-41]} {RNA1509_18804, RNA1509_53392} {RNA1310_15769, RNA1509_18804, RNA1509_53392} {RNA1509_18804, RNA1509_53392, RNA815_8900.1}

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