TomoSeq data search

Data search

Results for MligTC455_29548

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29548	1135	23.65	Mlig455_034410, Mlig455_048629, Mlig455_050075	Neo: - Age: - Region-enriched R4: 1.307/0.02685 Region-enriched R5: 1.041/0.01774	GTF2IRD2	Mlig455_034410 {REF} {Length: 1013} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=211, Expect=3e-61]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=210, Expect=8e-61]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=189, Expect=1e-53]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=226, Expect=8e-73]} {RNA1509_47691} {RNA1310_5733} {RNA815_33839} Mlig455_048629 {REF} {Length: 4021} {Pfam: Ndr family [PF03096.16, score=181.4]; Domain of unknown function (DUF4371) [PF14291.8, score=35.0]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=288, Expect=7e-84]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=287, Expect=1e-83]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=259, Expect=8e-74]} {Dmel: FBgn0043070, MESK2, Misexpression suppressor of KSR 2, [Score=130, Expect=3e-32]} {Celegans: WBGene00013020, Y48G10A.3, [Score=113, Expect=3e-27]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=227, Expect=1e-68]} {RNA1509_47691} {RNA1310_5733} {RNA815_9919} Mlig455_050075 {REF} {Length: 1013} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=211, Expect=3e-61]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=210, Expect=8e-61]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=189, Expect=1e-53]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=226, Expect=8e-73]} {RNA1509_47691} {RNA1310_5733} {RNA815_33839}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29548

1135

23.65

Mlig455_034410, Mlig455_048629, Mlig455_050075

Neo: -

Age: -

Region-enriched R4: 1.307/0.02685
Region-enriched R5: 1.041/0.01774

GTF2IRD2

Mlig455_034410 {REF} {Length: 1013} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=211, Expect=3e-61]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=210, Expect=8e-61]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=189, Expect=1e-53]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=226, Expect=8e-73]} {RNA1509_47691} {RNA1310_5733} {RNA815_33839}

Mlig455_048629 {REF} {Length: 4021} {Pfam: Ndr family [PF03096.16, score=181.4]; Domain of unknown function (DUF4371) [PF14291.8, score=35.0]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=288, Expect=7e-84]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=287, Expect=1e-83]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=259, Expect=8e-74]} {Dmel: FBgn0043070, MESK2, Misexpression suppressor of KSR 2, [Score=130, Expect=3e-32]} {Celegans: WBGene00013020, Y48G10A.3, [Score=113, Expect=3e-27]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=227, Expect=1e-68]} {RNA1509_47691} {RNA1310_5733} {RNA815_9919}

Mlig455_050075 {REF} {Length: 1013} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=211, Expect=3e-61]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=210, Expect=8e-61]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=189, Expect=1e-53]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=226, Expect=8e-73]} {RNA1509_47691} {RNA1310_5733} {RNA815_33839}

Cumulative graph for MligTC455_29548

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.298	4.841	0.20845	0.84741
RegionR2	-1.014	4.841	0.02997	0.19568
RegionR3	0.35	4.841	0.32761	0.86603
RegionR4	1.307	4.841	0.00339	0.02685
RegionR5	1.041	4.841	0.00204	0.01774
RegionR6	0.626	4.841	0.08512	0.53745
RegionR7	-0.301	4.841	0.50406	1.00000
RegionR8	-0.71	4.841	0.19019	0.78102

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.858	4.841	0.10972	0.83433
RegenerationR2	0.196	4.841	0.63025	0.92734
RegenerationR3	-0.271	4.841	0.52650	0.86995
RegenerationR4	-0.213	4.841	0.63403	0.92484
RegenerationR5	-0.25	4.841	0.53052	0.87517
RegenerationR6	-0.309	4.841	0.46351	0.78033
RegenerationBL	0.207	4.841	0.64243	0.98098
RegenerationTP	0.132	4.841	0.80129	1.00000

Genes with expression patterns similar to MligTC455_29548

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29548	1135	23.65	Mlig455_034410, Mlig455_048629, Mlig455_050075	Neo: - Age: - Region-enriched R4: 1.307/0.02685 Region-enriched R5: 1.041/0.01774	GTF2IRD2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034410 {REF} {Length: 1013} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=211, Expect=3e-61]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=210, Expect=8e-61]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=189, Expect=1e-53]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=226, Expect=8e-73]} {RNA1509_47691} {RNA1310_5733} {RNA815_33839} Mlig455_048629 {REF} {Length: 4021} {Pfam: Ndr family [PF03096.16, score=181.4]; Domain of unknown function (DUF4371) [PF14291.8, score=35.0]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=288, Expect=7e-84]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=287, Expect=1e-83]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=259, Expect=8e-74]} {Dmel: FBgn0043070, MESK2, Misexpression suppressor of KSR 2, [Score=130, Expect=3e-32]} {Celegans: WBGene00013020, Y48G10A.3, [Score=113, Expect=3e-27]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=227, Expect=1e-68]} {RNA1509_47691} {RNA1310_5733} {RNA815_9919} Mlig455_050075 {REF} {Length: 1013} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=211, Expect=3e-61]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=210, Expect=8e-61]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=189, Expect=1e-53]} {Smed: dd_Smed_v6_34552_0_1, dd_Smed_v6_34552_0_1, [RH, Score=226, Expect=8e-73]} {RNA1509_47691} {RNA1310_5733} {RNA815_33839}
2.	MligTC455_31410	10095	210.3	Mlig455_002152	Neo: Int S/G2/M Age: -		2.469	0.749	-	-	0.763	0.957	-	Mlig455_002152 {REF} {Length: 90} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_2901} {RNA815_21935}
3.	MligTC455_39732	10649	221.86	Mlig455_041612, Mlig455_041634	Neo: - Age: - Region-enriched R4: 1.069/0.00009		1.812	-	-	-	0.958	0.854	-	Mlig455_041612 {REF} {Length: 822} {Pfam: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) [PF10183.11, score=31.6]} {Mouse: ENSMUSG00000061633, 1700029P11Rik, RIKEN cDNA 1700029P11 gene, [RH, Score=43.5, Expect=6e-06]} {Dmel: FBgn0027785, NP15.6, [RH, Score=65.1, Expect=3e-14]} {Celegans: WBGene00018361, F42G8.10, [RH, Score=57.4, Expect=4e-11]} {Smed: dd_Smed_v6_3593_0_1, dd_Smed_v6_3593_0_1, [Score=82.8, Expect=3e-21]} {RNA1509_30022} {RNA1310_23528} {RNA815_10893.1} Mlig455_041634 {REF} {Length: 817} {Pfam: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) [PF10183.11, score=31.6]} {Mouse: ENSMUSG00000061633, 1700029P11Rik, RIKEN cDNA 1700029P11 gene, [RH, Score=43.5, Expect=6e-06]} {Dmel: FBgn0027785, NP15.6, [RH, Score=65.1, Expect=3e-14]} {Celegans: WBGene00018361, F42G8.10, [RH, Score=57.4, Expect=4e-11]} {Smed: dd_Smed_v6_3593_0_1, dd_Smed_v6_3593_0_1, [Score=82.8, Expect=3e-21]} {RNA1509_13109} {RNA1310_23528} {RNA815_10893.1}
4.	MligTC455_28030	4618	96.2	Mlig455_005390	Neo: - Age: -		1.678	0.723	-	-	-	0.955	-	Mlig455_005390 {REF} {Length: 1079} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}