Data search
Results for MligTC455_28064
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28064 | 123 | 2.56 | Mlig455_062126 | Neo: - Age: - |
SHD | Mlig455_062126 {REF} {Length: 6274} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=50.2]} {Human: ENSG00000105251, SHD, Src homology 2 domain containing transforming protein D, [RH, Score=99.4, Expect=3e-22]; ENSG00000138606, SHF, Src homology 2 domain containing F, [RH, Score=99.4, Expect=8e-22]} {Mouse: ENSMUSG00000033256, Shf, Src homology 2 domain containing F, [RH, Score=97.4, Expect=2e-22]} {Dmel: FBgn0264542, hwt, heavyweight, [RH, Score=124, Expect=2e-29]} {Celegans: WBGene00013603, soem-1, Suppressor Of Ectopic Mig-13 (mig-13) expression, [RH, Score=50.1, Expect=6e-07]} {Smed: dd_Smed_v6_6594_0_1, dd_Smed_v6_6594_0_1, [RH, Score=117, Expect=2e-27]} {RNA1509_38917} {RNA1310_8313, RNA1509_38917} {RNA1509_38917, RNA815_7976} |
Cumulative graph for MligTC455_28064
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.709 | 2.214 | 0.50078 | 1.00000 | |
| RegionR2 | -0.466 | 2.214 | 0.61047 | 0.95833 | |
| RegionR3 | -1.038 | 2.214 | 0.17217 | 0.69816 | |
| RegionR4 | 0.52 | 2.214 | 0.55093 | 0.87141 | |
| RegionR5 | 0.347 | 2.214 | 0.55038 | 0.91199 | |
| RegionR6 | -0.871 | 2.214 | 0.27309 | 0.86180 | |
| RegionR7 | -1.335 | 2.214 | 0.31080 | 0.94489 | |
| RegionR8 | 1.134 | 2.214 | 0.32939 | 0.96242 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.795 | 2.214 | 0.32609 | 1.00000 | |
| RegenerationR2 | 0.41 | 2.214 | 0.53176 | 0.88532 | |
| RegenerationR3 | 0.61 | 2.214 | 0.46024 | 0.83763 | |
| RegenerationR4 | -0.04 | 2.214 | 0.95263 | 1.00000 | |
| RegenerationR5 | 0.366 | 2.214 | 0.56311 | 0.89305 | |
| RegenerationR6 | 0.488 | 2.214 | 0.56175 | 0.84661 | |
| RegenerationBL | 0.253 | 2.214 | 0.81733 | 1.00000 | |
| RegenerationTP | 0.89 | 2.214 | 0.40836 | 0.83535 |
Genes with expression patterns similar to MligTC455_28064
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28064 | 123 | 2.56 | Mlig455_062126 | Neo: - Age: - |
SHD | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062126 {REF} {Length: 6274} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=50.2]} {Human: ENSG00000105251, SHD, Src homology 2 domain containing transforming protein D, [RH, Score=99.4, Expect=3e-22]; ENSG00000138606, SHF, Src homology 2 domain containing F, [RH, Score=99.4, Expect=8e-22]} {Mouse: ENSMUSG00000033256, Shf, Src homology 2 domain containing F, [RH, Score=97.4, Expect=2e-22]} {Dmel: FBgn0264542, hwt, heavyweight, [RH, Score=124, Expect=2e-29]} {Celegans: WBGene00013603, soem-1, Suppressor Of Ectopic Mig-13 (mig-13) expression, [RH, Score=50.1, Expect=6e-07]} {Smed: dd_Smed_v6_6594_0_1, dd_Smed_v6_6594_0_1, [RH, Score=117, Expect=2e-27]} {RNA1509_38917} {RNA1310_8313, RNA1509_38917} {RNA1509_38917, RNA815_7976} |
| 2. | MligTC455_41753 | 224 | 4.67 | Mlig455_062497 | Neo: - Age: - |
CCZ1 | 2.456 | 0.951 | - | - | 0.804 | - | 0.701 | Mlig455_062497 {REF} {Length: 2115} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=89.7]; Intu longin-like domain 2 [PF19032.2, score=77.1]; Intu longin-like domain 3 [PF19033.2, score=38.3]} {Human: ENSG00000122674, CCZ1, CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, [RH, Score=313, Expect=4e-101]; ENSG00000146574, CCZ1B, CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, [RH, Score=313, Expect=4e-101]} {Mouse: ENSMUSG00000029617, Ccz1, CCZ1 vacuolar protein trafficking and biogenesis associated, [RH, Score=320, Expect=5e-104]} {Dmel: FBgn0035470, Ccz1, Caffeine, calcium, zinc sensitivity 1, [RH, Score=151, Expect=3e-40]} {Celegans: WBGene00010283, ccz-1, [RH, Score=112, Expect=3e-26]} {Smed: dd_Smed_v6_9997_0_1, dd_Smed_v6_9997_0_1, [RH, Score=139, Expect=8e-36]} {RNA1509_13134} {RNA1310_14840} {RNA815_5189.1} |
| 3. | MligTC455_16477 | 427 | 8.9 | Mlig455_042989 | Neo: - Age: Down-Up-Down |
ARF6 | 1.818 | 0.950 | - | - | - | - | 0.868 | Mlig455_042989 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=111.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.3]; 6-phosphofructo-2-kinase [PF01591.20, score=18.8]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [Score=148, Expect=7e-46]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [Score=148, Expect=5e-46]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [Score=149, Expect=1e-46]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=142, Expect=7e-44]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [Score=135, Expect=2e-41]} {RNA1509_12815} {RNA1310_25955} {RNA815_11670.2} |
| 4. | MligTC455_44749 | 480 | 10 | Mlig455_017988 | Neo: Int S/G2/M Age: - |
LIPT2 | 1.748 | 0.974 | - | - | 0.774 | - | - | Mlig455_017988 {REF} {Length: 2697} {TRANSSPLICED} {Human: ENSG00000175536, LIPT2, lipoyl(octanoyl) transferase 2, [RH, Score=164, Expect=3e-46]} {Mouse: ENSMUSG00000030725, Lipt2, lipoyl(octanoyl) transferase 2 (putative), [RH, Score=168, Expect=1e-47]} {Dmel: FBgn0037251, CG9804, [RH, Score=205, Expect=1e-61]} {Celegans: WBGene00003066, lpl-1, LiPoate Ligase; Ny, [RH, Score=181, Expect=1e-52]} {Smed: dd_Smed_v6_8145_0_1, dd_Smed_v6_8145_0_1, [RH, Score=190, Expect=2e-56]} {RNA1509_28130} {RNA1310_21849} {RNA815_986} |
| 5. | MligTC455_26263 | 70 | 1.45 | Mlig455_040654 | Neo: - Age: Up-Down-Down |
NR1I3 | 1.729 | - | - | - | 0.778 | - | 0.951 | Mlig455_040654 {REF} {Length: 4785} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.2]} {Human: ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=99.8, Expect=3e-22]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=99.4, Expect=1e-21]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=95.5, Expect=2e-20]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=98.2, Expect=7e-21]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=112, Expect=2e-25]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=183, Expect=2e-50]} {RNA1509_15212} {RNA1310_18440} {RNA815_11206} |
| 6. | MligTC455_16399 | 79 | 1.65 | Mlig455_020491 | Neo: - Age: - |
0.965 | - | - | 0.965 | - | - | - | Mlig455_020491 {REF} {Length: 1238} {TRANSSPLICED} {RNA1509_33940} {RNA1310_6782.1} {RNA815_4292} | |
| 7. | MligTC455_40825 | 836 | 17.42 | Mlig455_051488 | Neo: Irradiation Age: Down-Down-Up |
ZNHIT1 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_051488 {REF} {Length: 722} {TRANSSPLICED} {Pfam: HIT zinc finger [PF04438.18, score=29.0]} {Human: ENSG00000106400, ZNHIT1, zinc finger HIT-type containing 1, [RH, Score=115, Expect=2e-32]} {Mouse: ENSMUSG00000059518, Znhit1, zinc finger, HIT domain containing 1, [RH, Score=114, Expect=2e-32]} {Dmel: FBgn0031668, CG31917, [RH, Score=119, Expect=2e-34]} {Celegans: WBGene00016992, zhit-1, Zinc finger, HIT-type, [RH, Score=100, Expect=8e-27]} {Smed: dd_Smed_v6_10876_0_1, dd_Smed_v6_10876_0_1, [RH, Score=118, Expect=3e-34]} {RNA1509_24528} {RNA1310_2303, RNA1509_24528} {RNA1509_24528, RNA815_51296} |
| 8. | MligTC455_19138 | 92 | 1.91 | Mlig455_028338 | Neo: - Age: - |
CCDC103 | 0.959 | 0.959 | - | - | - | - | - | Mlig455_028338 {REF} {Length: 1607} {TRANSSPLICED} {Pfam: Dynein attachment factor N-terminus [PF15867.7, score=94.3]; Potential Monad-binding region of RPAP3 [PF13877.8, score=59.1]} {Human: ENSG00000167131, CCDC103, coiled-coil domain containing 103, [RH, Score=105, Expect=5e-27]; ENSG00000214447, FAM187A, family with sequence similarity 187 member A, [RH, Score=105, Expect=6e-27]} {Mouse: ENSMUSG00000020930, Ccdc103, coiled-coil domain containing 103, [RH, Score=111, Expect=1e-29]} {Dmel: FBgn0033623, CG13202, [RH, Score=46.6, Expect=6e-07]} {Smed: dd_Smed_v6_14131_0_1, dd_Smed_v6_14131_0_1, [RH, Score=87.8, Expect=5e-21]} {RNA1509_44514} {RNA1310_34867.1} {RNA815_14846} |
| 9. | MligTC455_29218 | 744 | 15.49 | Mlig455_032479 | Neo: - Age: - |
ARRB1 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_032479 {REF} {Length: 3554} {TRANSSPLICED} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=110.5]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=82.8]} {Human: ENSG00000137486, ARRB1, arrestin beta 1, [RH, Score=498, Expect=8e-175]; ENSG00000141480, ARRB2, arrestin beta 2, [RH, Score=491, Expect=4e-172]} {Mouse: ENSMUSG00000018909, Arrb1, arrestin, beta 1, [RH, Score=497, Expect=2e-174]; ENSMUSG00000060216, Arrb2, arrestin, beta 2, [RH, Score=490, Expect=9e-172]} {Dmel: FBgn0040206, krz, kurtz, [RH, Score=503, Expect=4e-176]} {Celegans: WBGene00000195, arr-1, Probable beta-arrestin, [RH, Score=489, Expect=1e-171]} {Smed: dd_Smed_v6_5512_0_2, dd_Smed_v6_5512_0_2, [RH, Score=609, Expect=0.0]} {RNA1509_53235, RNA1509_5422} {RNA1310_12451, RNA1509_53235, RNA1509_5422} {RNA1509_53235, RNA1509_5422, RNA815_5506} |
| 10. | MligTC455_29225 | 65 | 1.35 | Mlig455_026933, Mlig455_027026 | Neo: - Age: logFC(26M/2M)=-0.787 |
0.956 | - | - | - | 0.956 | - | - | Mlig455_026933 {REF} {Length: 539} {Smed: dd_Smed_v6_14768_0_4, dd_Smed_v6_14768_0_4, [Score=43.1, Expect=1e-05]} {RNA1310_40265} {RNA815_19809} Mlig455_027026 {REF} {Length: 4218} {RNA1509_19711} {RNA1310_4563} {RNA815_20739} |
|
| 11. | MligTC455_54111 | 330 | 6.87 | Mlig455_031536 | Neo: Int S/G2/M Age: Down-Up-Down Region-specific R4: 4.175 Region-enriched R4: 4.555/0.00000 |
CHMP1B | 0.954 | - | - | - | 0.954 | - | - | Mlig455_031536 {REF} {Length: 841} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=58.4]} {Human: ENSG00000255112, CHMP1B, charged multivesicular body protein 1B, [Score=211, Expect=3e-69]} {Mouse: ENSMUSG00000031242, 2610002M06Rik, RIKEN cDNA 2610002M06 gene, [Score=211, Expect=1e-69]; ENSMUSG00000109901, Chmp1b, charged multivesicular body protein 1B, [Score=209, Expect=8e-69]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=232, Expect=7e-78]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=225, Expect=3e-75]} {Smed: dd_Smed_v6_630_0_1, dd_Smed_v6_630_0_1, [Score=236, Expect=1e-79]} {RNA1509_28724} {RNA1310_41507, RNA1509_28724} {RNA1509_28724, RNA815_20010.2} |
| 12. | MligTC455_20628 | 439 | 9.14 | Mlig455_058160, Mlig455_058225, Mlig455_058231 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_058160 {REF} {Length: 3431} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=4e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=201, Expect=2e-58]} {RNA1509_19499} {RNA1310_13236.1} {RNA815_4665} Mlig455_058225 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.1, RNA1509_19499} {RNA1509_19499, RNA815_4665} Mlig455_058231 {REF} {Length: 2506} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.2} {RNA815_4665} |
|
| 13. | MligTC455_49656 | 470 | 9.8 | Mlig455_002471 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_002471 {REF} {Length: 1608} {NoTransDecoderORF} {RNA1509_38083} {RNA1310_11759} {RNA815_10366} |
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