TomoSeq data search

Data search

Results for MligTC455_29225

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29225	65	1.35	Mlig455_026933, Mlig455_027026	Neo: - Age: logFC(26M/2M)=-0.787		Mlig455_026933 {REF} {Length: 539} {Smed: dd_Smed_v6_14768_0_4, dd_Smed_v6_14768_0_4, [Score=43.1, Expect=1e-05]} {RNA1310_40265} {RNA815_19809} Mlig455_027026 {REF} {Length: 4218} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_29225

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.866	1.418	0.99963	1.00000
RegionR2	1.09	1.418	0.48706	0.86965
RegionR3	-0.849	1.418	0.99217	1.00000
RegionR4	0.924	1.418	0.43422	0.76313
RegionR5	1.14	1.418	0.39078	0.74621
RegionR6	0.464	1.418	0.63539	1.00000
RegionR7	1.958	1.418	0.25585	0.88300
RegionR8	-1.862	1.418	0.99998	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.028	1.418	0.59959	1.00000
RegenerationR2	0.465	1.418	0.60760	0.91884
RegenerationR3	2.014	1.418	0.17557	0.61138
RegenerationR4	1.121	1.418	0.30978	0.74988
RegenerationR5	1.37	1.418	0.20488	0.63787
RegenerationR6	1.773	1.418	0.17034	0.50158
RegenerationBL	2.686	1.418	0.11672	0.40442
RegenerationTP	2.248	1.418	0.34223	0.78499

Genes with expression patterns similar to MligTC455_29225

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29225	65	1.35	Mlig455_026933, Mlig455_027026	Neo: - Age: logFC(26M/2M)=-0.787		3	-	-	1.000	1.000	1.000	-	Mlig455_026933 {REF} {Length: 539} {Smed: dd_Smed_v6_14768_0_4, dd_Smed_v6_14768_0_4, [Score=43.1, Expect=1e-05]} {RNA1310_40265} {RNA815_19809} Mlig455_027026 {REF} {Length: 4218} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}
2.	MligTC455_31995	208	4.32	Mlig455_006132, Mlig455_022248, Mlig455_040883, Mlig455_062978	Neo: - Age: -		1.834	-	-	-	0.962	0.872	-	Mlig455_006132 {REF} {Length: 1379} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=20.7]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=64.3, Expect=2e-13]} {RNA1509_19711} {RNA1310_4563} {RNA815_51218} Mlig455_022248 {REF} {Length: 2566} {Pfam: Integrase core domain [PF00665.28, score=45.1]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=135, Expect=9e-39]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739} Mlig455_040883 {REF} {Length: 746} {Pfam: Integrase core domain [PF00665.28, score=47.1]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=77.8, Expect=3e-17]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739} Mlig455_062978 {REF} {Length: 2584} {Pfam: Integrase core domain [PF00665.28, score=50.9]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=137, Expect=1e-39]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}
3.	MligTC455_28064	123	2.56	Mlig455_062126	Neo: - Age: -	SHD	0.956	-	-	-	0.956	-	-	Mlig455_062126 {REF} {Length: 6274} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=50.2]} {Human: ENSG00000105251, SHD, Src homology 2 domain containing transforming protein D, [RH, Score=99.4, Expect=3e-22]; ENSG00000138606, SHF, Src homology 2 domain containing F, [RH, Score=99.4, Expect=8e-22]} {Mouse: ENSMUSG00000033256, Shf, Src homology 2 domain containing F, [RH, Score=97.4, Expect=2e-22]} {Dmel: FBgn0264542, hwt, heavyweight, [RH, Score=124, Expect=2e-29]} {Celegans: WBGene00013603, soem-1, Suppressor Of Ectopic Mig-13 (mig-13) expression, [RH, Score=50.1, Expect=6e-07]} {Smed: dd_Smed_v6_6594_0_1, dd_Smed_v6_6594_0_1, [RH, Score=117, Expect=2e-27]} {RNA1509_38917} {RNA1310_8313, RNA1509_38917} {RNA1509_38917, RNA815_7976}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_29225

1.35

Mlig455_026933, Mlig455_027026

Neo: -

Age: logFC(26M/2M)=-0.787

1.000

Mlig455_026933 {REF} {Length: 539} {Smed: dd_Smed_v6_14768_0_4, dd_Smed_v6_14768_0_4, [Score=43.1, Expect=1e-05]} {RNA1310_40265} {RNA815_19809}

Mlig455_027026 {REF} {Length: 4218} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}

MligTC455_31995

208

4.32

Mlig455_006132, Mlig455_022248, Mlig455_040883, Mlig455_062978

Neo: -

Age: -

1.834

0.962

0.872

Mlig455_006132 {REF} {Length: 1379} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=20.7]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=64.3, Expect=2e-13]} {RNA1509_19711} {RNA1310_4563} {RNA815_51218}

Mlig455_022248 {REF} {Length: 2566} {Pfam: Integrase core domain [PF00665.28, score=45.1]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=135, Expect=9e-39]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}

Mlig455_040883 {REF} {Length: 746} {Pfam: Integrase core domain [PF00665.28, score=47.1]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=77.8, Expect=3e-17]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}

Mlig455_062978 {REF} {Length: 2584} {Pfam: Integrase core domain [PF00665.28, score=50.9]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=137, Expect=1e-39]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}

MligTC455_28064

123

2.56

Mlig455_062126

Neo: -

Age: -

SHD

0.956

Mlig455_062126 {REF} {Length: 6274} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=50.2]} {Human: ENSG00000105251, SHD, Src homology 2 domain containing transforming protein D, [RH, Score=99.4, Expect=3e-22]; ENSG00000138606, SHF, Src homology 2 domain containing F, [RH, Score=99.4, Expect=8e-22]} {Mouse: ENSMUSG00000033256, Shf, Src homology 2 domain containing F, [RH, Score=97.4, Expect=2e-22]} {Dmel: FBgn0264542, hwt, heavyweight, [RH, Score=124, Expect=2e-29]} {Celegans: WBGene00013603, soem-1, Suppressor Of Ectopic Mig-13 (mig-13) expression, [RH, Score=50.1, Expect=6e-07]} {Smed: dd_Smed_v6_6594_0_1, dd_Smed_v6_6594_0_1, [RH, Score=117, Expect=2e-27]} {RNA1509_38917} {RNA1310_8313, RNA1509_38917} {RNA1509_38917, RNA815_7976}