Data search
Results for MligTC455_28131
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28131 | 113 | 2.34 | Mlig455_033779 | Neo: - Age: - |
Mlig455_033779 {REF} {Length: 4189} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} |
Cumulative graph for MligTC455_28131
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.781 | 1.981 | 0.86024 | 1.00000 | |
| RegionR2 | 1.347 | 1.981 | 0.27088 | 0.65508 | |
| RegionR3 | -0.265 | 1.981 | 0.85390 | 1.00000 | |
| RegionR4 | -0.451 | 1.981 | 0.78891 | 1.00000 | |
| RegionR5 | 0.492 | 1.981 | 0.60002 | 0.95733 | |
| RegionR6 | -1.127 | 1.981 | 0.50801 | 1.00000 | |
| RegionR7 | 1.045 | 1.981 | 0.51103 | 1.00000 | |
| RegionR8 | -0.26 | 1.981 | 0.92223 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.406 | 1.981 | 0.69839 | 1.00000 | |
| RegenerationR2 | 0.691 | 1.981 | 0.27634 | 0.72066 | |
| RegenerationR3 | 1.371 | 1.981 | 0.20447 | 0.63921 | |
| RegenerationR4 | 1.353 | 1.981 | 0.13451 | 0.55334 | |
| RegenerationR5 | 0.992 | 1.981 | 0.21925 | 0.65377 | |
| RegenerationR6 | 2.98 | 1.981 | 0.00562 | 0.09093 | |
| RegenerationBL | 2.569 | 1.981 | 0.02500 | 0.17404 | |
| RegenerationTP | 1.482 | 1.981 | 0.34853 | 0.79011 |
Genes with expression patterns similar to MligTC455_28131
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28131 | 113 | 2.34 | Mlig455_033779 | Neo: - Age: - |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033779 {REF} {Length: 4189} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} | |
| 2. | MligTC455_28127 | 79 | 1.65 | Mlig455_055897 | Neo: - Age: - |
2.857 | - | - | 0.959 | 0.960 | 0.938 | - | Mlig455_055897 {REF} {Length: 2601} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} | |
| 3. | MligTC455_20790 | 215 | 4.47 | Mlig455_000517 | Neo: - Age: - |
2.641 | - | - | - | 0.841 | 0.975 | 0.825 | Mlig455_000517 {REF} {Length: 7567} {Pfam: Schizosaccharomyces pombe repeat of unknown function (DUF963) [PF06131.13, score=29.2]} {RNA1509_26916, RNA1509_49774} {RNA1310_4216.1, RNA1509_49774} {RNA1509_49774, RNA815_5505.1} | |
| 4. | MligTC455_22712 | 451 | 9.39 | Mlig455_036500, Mlig455_056387 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.479 Regeneration-upregulated BL: 3.623 Regeneration-enriched BL: 3.623 |
CASZ1 | 1.854 | - | - | - | 0.954 | - | 0.900 | Mlig455_036500 {REF} {Length: 3533} {Human: ENSG00000130940, CASZ1, castor zinc finger 1, [RH, Score=266, Expect=1e-73]} {Mouse: ENSMUSG00000028977, Casz1, castor zinc finger 1, [RH, Score=271, Expect=2e-75]} {Dmel: FBgn0004878, cas, castor, [RH, Score=267, Expect=3e-76]} {Smed: dd_Smed_v6_6778_0_1, dd_Smed_v6_6778_0_1, [RH, Score=478, Expect=1e-152]} {RNA1509_38584} {RNA1310_14915, RNA1509_38584} {RNA1509_38584, RNA815_45739} Mlig455_056387 {REF} {Length: 3535} {Human: ENSG00000130940, CASZ1, castor zinc finger 1, [Score=222, Expect=5e-60]} {Mouse: ENSMUSG00000028977, Casz1, castor zinc finger 1, [Score=223, Expect=2e-60]} {Dmel: FBgn0004878, cas, castor, [Score=219, Expect=4e-61]} {Smed: dd_Smed_v6_6778_0_1, dd_Smed_v6_6778_0_1, [Score=275, Expect=4e-79]} {RNA1509_38584} {RNA1310_14915} {RNA815_45739} |
| 5. | MligTC455_53819 | 234 | 4.88 | Mlig455_029142, Mlig455_032108 | Neo: - Age: - |
1.754 | - | - | - | - | 0.799 | 0.955 | Mlig455_029142 {REF} {Length: 262} {NoTransDecoderORF} {RNA1310_91707} {RNA815_47119} Mlig455_032108 {REF} {Length: 1704} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_88113} {RNA815_47119} |
|
| 6. | MligTC455_44710 | 1043 | 21.73 | Mlig455_059157, Mlig455_065533 | Neo: - Age: Down-Up-Down |
CAPN9 | 1.726 | - | - | - | 0.950 | - | 0.776 | Mlig455_059157 {REF} {Length: 4269} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=343.7]; Calpain large subunit, domain III [PF01067.24, score=126.9]; EF hand [PF00036.34, score=25.4]; EF-hand domain [PF13405.8, score=25.2]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=452, Expect=1e-146]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=446, Expect=5e-144]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=457, Expect=7e-146]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=365, Expect=5e-113]} {Smed: dd_Smed_v6_4499_0_1, dd_Smed_v6_4499_0_1, [RH, Score=491, Expect=8e-160]} {RNA1509_11645} {RNA1310_4797.1} {RNA815_16849} Mlig455_065533 {REF} {Length: 3264} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=340.7]; Calpain large subunit, domain III [PF01067.24, score=129.6]; EF-hand domain [PF13405.8, score=27.7]; EF hand [PF00036.34, score=27.3]; EF-hand domain pair [PF13499.8, score=20.5]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=460, Expect=1e-152]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=455, Expect=7e-151]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=449, Expect=1e-145]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=363, Expect=2e-115]} {Smed: dd_Smed_v6_4499_0_1, dd_Smed_v6_4499_0_1, [RH, Score=492, Expect=2e-163]} {RNA1509_11645} {RNA1310_4797.1, RNA1509_11645} {RNA1509_11645, RNA815_16849} |
| 7. | MligTC455_19148 | 151 | 3.15 | Mlig455_041025 | Neo: - |
DUT | 1.699 | - | - | - | 0.956 | - | 0.743 | Mlig455_041025 {REF} {Length: 736} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=108.5]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=101, Expect=2e-27]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=99.4, Expect=2e-26]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=107, Expect=9e-30]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=105, Expect=5e-27]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=105, Expect=1e-29]} {RNA1509_31148} {RNA1310_12927} {RNA815_27386} |
| 8. | MligTC455_30282 | 79 | 1.64 | Mlig455_028986 | Neo: - Age: - |
1.684 | - | - | - | 0.954 | 0.730 | - | Mlig455_028986 {REF} {Length: 2481} {Celegans: WBGene00022511, ZC53.4, [Score=80.1, Expect=3e-18]} {Smed: dd_Smed_v6_23154_0_1, dd_Smed_v6_23154_0_1, [Score=126, Expect=2e-36]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} | |
| 9. | MligTC455_37394 | 43 | 0.89 | Mlig455_013716 | Neo: - |
STK26 | 1.663 | - | - | - | 0.954 | 0.709 | - | Mlig455_013716 {REF} {Length: 3206} {Pfam: Protein kinase domain [PF00069.27, score=84.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=58.2]; Ankyrin repeats (many copies) [PF13637.8, score=54.2]; Ankyrin repeats (3 copies) [PF12796.9, score=51.9]; Ankyrin repeats (many copies) [PF13857.8, score=34.6]; Ankyrin repeat [PF13606.8, score=34.0]; Ankyrin repeat [PF00023.32, score=23.7]} {Human: ENSG00000134602, STK26, serine/threonine kinase 26, [Score=65.9, Expect=7e-11]; ENSG00000065613, SLK, STE20 like kinase, [Score=65.1, Expect=4e-10]; ENSG00000166963, MAP1A, microtubule associated protein 1A, [Score=65.1, Expect=4e-10]; ENSG00000137601, NEK1, NIMA related kinase 1, [Score=64.3, Expect=7e-10]; ENSG00000132155, RAF1, Raf-1 proto-oncogene, serine/threonine kinase, [Score=64.3, Expect=5e-10]; ENSG00000126562, WNK4, WNK lysine deficient protein kinase 4, [Score=63.5, Expect=1e-09]} {Mouse: ENSMUSG00000031644, Nek1, NIMA (never in mitosis gene a)-related expressed kinase 1, [Score=65.1, Expect=3e-10]; ENSMUSG00000031112, Stk26, serine/threonine kinase 26, [Score=64.7, Expect=2e-10]; ENSMUSG00000025060, Slk, STE20-like kinase, [Score=64.3, Expect=5e-10]; ENSMUSG00000000441, Raf1, v-raf-leukemia viral oncogene 1, [Score=63.9, Expect=5e-10]; ENSMUSG00000035112, Wnk4, WNK lysine deficient protein kinase 4, [Score=63.2, Expect=1e-09]} {Dmel: FBgn0031299, CG4629, [Score=56.2, Expect=7e-08]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=54.3, Expect=3e-07]} {Smed: dd_Smed_v6_1196_0_1, dd_Smed_v6_1196_0_1, [Score=51.2, Expect=7e-07]} {RNA1509_11136} {RNA1310_29101} {RNA815_16478} |
| 10. | MligTC455_21703 | 208 | 4.34 | Mlig455_024187 | Neo: - Age: - |
0.973 | - | - | - | 0.973 | - | - | Mlig455_024187 {REF} {Length: 1020} {NoTransDecoderORF} {RNA1509_42051} {RNA1310_26452} {RNA815_50612} | |
| 11. | MligTC455_44214 | 826 | 17.2 | Mlig455_051977 | Neo: - Age: logFC(26M/2M)=-0.586 |
TRPM3 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_051977 {REF} {Length: 7693} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=181.9]; Ankyrin repeats (many copies) [PF13637.8, score=159.2]; Ankyrin repeat [PF13606.8, score=83.5]; Ankyrin repeats (many copies) [PF13857.8, score=69.7]; Ankyrin repeat [PF00023.32, score=40.0]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=19.8]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=88.6, Expect=1e-16]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=88.6, Expect=7e-17]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=84.3, Expect=1e-15]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=77.8, Expect=1e-13]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=89.7, Expect=2e-17]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=115, Expect=1e-25]} {RNA1509_3976, RNA1509_45452, RNA1509_49658} {RNA1310_537, RNA1509_3976, RNA1509_45452, RNA1509_49658} {RNA1509_3976, RNA1509_45452, RNA1509_49658, RNA815_57.1} |
| 12. | MligTC455_20484 | 34 | 0.71 | Mlig455_065789 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_065789 {REF} {Length: 1952} {NoTransDecoderORF} {RNA1509_59036} {RNA1310_140391} {RNA815_21157} | |
| 13. | MligTC455_50100 | 86 | 1.8 | Mlig455_031032 | Neo: - Age: - Region-enriched R8: 4.201/0.00579 |
SLC4A11 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_031032 {REF} {Length: 3497} {Pfam: HCO3- transporter family [PF00955.23, score=526.7]; Band 3 cytoplasmic domain [PF07565.15, score=23.8]; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 [PF00359.24, score=22.0]} {Human: ENSG00000088836, SLC4A11, solute carrier family 4 member 11, [RH, Score=547, Expect=3e-180]} {Mouse: ENSMUSG00000074796, Slc4a11, solute carrier family 4, sodium bicarbonate transporter-like, member 11, [RH, Score=533, Expect=2e-175]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=242, Expect=3e-66]} {Celegans: WBGene00019018, abts-3, Anion transporter ABTS-3; Anion/Bicarbonate TranSporter family, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_16577_0_1, dd_Smed_v6_16577_0_1, [RH, Score=904, Expect=0.0]} {RNA1509_55902} {RNA1310_18543} {RNA815_14015} |
| 14. | MligTC455_13466 | 77 | 1.6 | Mlig455_024443 | Neo: - Age: - Region-enriched R2: 4.749/0.03840 Regeneration-upregulated R5: 4.247 Regeneration-enriched R5: 4.247 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_024443 {REF} {Length: 381} {RNA1310_302.2} | |
| 15. | MligTC455_19689 | 125 | 2.6 | Mlig455_012057 | Neo: Int S/G2/M Age: Down-Down-Down |
SMARCAL1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_012057 {REF} {Length: 3692} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=106.8]; HepA-related protein (HARP) [PF07443.15, score=66.4]; Helicase conserved C-terminal domain [PF00271.33, score=45.2]; Type III restriction enzyme, res subunit [PF04851.17, score=21.1]} {Human: ENSG00000138375, SMARCAL1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, [RH, Score=468, Expect=4e-152]} {Mouse: ENSMUSG00000039354, Smarcal1, SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, [RH, Score=485, Expect=1e-159]} {Dmel: FBgn0031655, Marcal1, [RH, Score=374, Expect=1e-118]} {Celegans: WBGene00015806, smrc-1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 homolog, [RH, Score=409, Expect=5e-133]} {Smed: dd_Smed_v6_10238_0_1, dd_Smed_v6_10238_0_1, [RH, Score=510, Expect=4e-172]} {RNA1509_13058} {RNA1310_6023, RNA1509_13058} {RNA1509_13058, RNA815_1885.1} |
| 16. | MligTC455_29937 | 75 | 1.55 | Mlig455_053384 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_053384 {REF} {Length: 3610} {NoTransDecoderORF} {RNA1509_57191} {RNA1310_45092} {RNA815_10095.1} | |
| 17. | MligTC455_40859 | 58 | 1.2 | Mlig455_009533 | Neo: - Age: - |
TRIOBP | 0.954 | - | - | - | - | - | 0.954 | Mlig455_009533 {REF} {Length: 2328} {Human: ENSG00000100106, TRIOBP, TRIO and F-actin binding protein, [Score=58.2, Expect=8e-09]} |
| 18. | MligTC455_43057 | 148 | 3.08 | Mlig455_037020 | Neo: - Age: Down-Up-Up |
0.952 | - | - | - | - | 0.952 | - | Mlig455_037020 {REF} {Length: 3493} {RNA1509_24680} {RNA1310_17561} {RNA815_8295.1} |
Berezikov Lab - 2020-2021 © ERIBA