Data search
Results for MligTC455_28218
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28218 | 313 | 6.52 | Mlig455_028294, Mlig455_042261, Mlig455_047780, Mlig455_061505 | Neo: - Age: - |
Mlig455_028294 {REF} {Length: 1468} {NoTransDecoderORF} {RNA1509_26270} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_042261 {REF} {Length: 582} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_047780 {REF} {Length: 499} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_061505 {REF} {Length: 6981} {NoTransDecoderORF} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} |
Cumulative graph for MligTC455_28218
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.122 | 3.031 | 0.44958 | 1.00000 | |
| RegionR2 | 1.559 | 3.031 | 0.13373 | 0.45402 | |
| RegionR3 | 0.636 | 3.031 | 0.51229 | 1.00000 | |
| RegionR4 | -0.336 | 3.031 | 0.87396 | 1.00000 | |
| RegionR5 | -0.791 | 3.031 | 0.68717 | 1.00000 | |
| RegionR6 | -0.797 | 3.031 | 0.68896 | 1.00000 | |
| RegionR7 | 0.836 | 3.031 | 0.53308 | 1.00000 | |
| RegionR8 | 2.015 | 3.031 | 0.16840 | 0.74063 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.762 | 3.031 | 0.08198 | 0.77957 | |
| RegenerationR2 | 1.116 | 3.031 | 0.09977 | 0.50000 | |
| RegenerationR3 | 1.508 | 3.031 | 0.06598 | 0.43172 | |
| RegenerationR4 | 1.489 | 3.031 | 0.05724 | 0.38389 | |
| RegenerationR5 | 1.417 | 3.031 | 0.09106 | 0.46402 | |
| RegenerationR6 | 2.93 | 3.031 | 0.00152 | 0.04349 | |
| RegenerationBL | 0.614 | 3.031 | 0.51411 | 0.87745 | |
| RegenerationTP | 0.292 | 3.031 | 0.77804 | 1.00000 |
Genes with expression patterns similar to MligTC455_28218
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28218 | 313 | 6.52 | Mlig455_028294, Mlig455_042261, Mlig455_047780, Mlig455_061505 | Neo: - Age: - |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028294 {REF} {Length: 1468} {NoTransDecoderORF} {RNA1509_26270} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_042261 {REF} {Length: 582} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_047780 {REF} {Length: 499} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_061505 {REF} {Length: 6981} {NoTransDecoderORF} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} |
|
| 2. | MligTC455_28204 | 1060 | 22.08 | Mlig455_000806, Mlig455_016770, Mlig455_021269, Mlig455_026403, Mlig455_027111, Mlig455_051724, Mlig455_059141, Mlig455_066023, Mlig455_066954 | Neo: - Age: Up-Down-Up |
PRR9 | 3.761 | - | - | 0.944 | 0.977 | 0.987 | 0.853 | Mlig455_000806 {REF} {Length: 1324} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_016770 {REF} {Length: 3416} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} Mlig455_021269 {REF} {Length: 13616} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=2e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=84.7, Expect=4e-18]} {RNA1509_30620} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_026403 {REF} {Length: 1937} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=7e-07]} {RNA1509_30620, RNA1509_51595} {RNA1310_13656, RNA1509_51595} {RNA1509_51595, RNA815_1450.1} Mlig455_027111 {REF} {Length: 3364} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.0, Expect=2e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=50.4, Expect=3e-07]} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} Mlig455_051724 {REF} {Length: 8347} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} Mlig455_059141 {REF} {Length: 7369} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=48.1, Expect=2e-07]} {RNA1509_30620} {RNA1310_4439.1} {RNA815_1450.1} Mlig455_066023 {REF} {Length: 2127} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} Mlig455_066954 {REF} {Length: 8210} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=1e-06]} {RNA1509_30620} {RNA1310_4439.1} {RNA815_1450.1} |
| 3. | MligTC455_28210 | 76 | 1.58 | Mlig455_055621 | Neo: - Age: Up-Down-Down |
GABBR2 | 3.7 | - | - | 0.834 | 0.945 | 0.967 | 0.954 | Mlig455_055621 {REF} {Length: 3422} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=181.3]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=278, Expect=7e-83]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=278, Expect=8e-83]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=320, Expect=5e-97]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=241, Expect=5e-70]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=177, Expect=7e-53]} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} |
| 4. | MligTC455_34131 | 74 | 1.54 | Mlig455_039225, Mlig455_041519 | Neo: - Age: - |
1.828 | - | - | 0.950 | - | - | 0.878 | Mlig455_039225 {REF} {Length: 3344} {NoTransDecoderORF} {RNA1509_27914} {RNA1310_4467.1} {RNA815_14537.1} Mlig455_041519 {REF} {Length: 188} {NoTransDecoderORF} {RNA1509_21258} {RNA1310_4467.1} {RNA815_64666} |
|
| 5. | MligTC455_29679 | 78 | 1.63 | Mlig455_069640 | Neo: - Age: logFC(26M/2M)=-0.480 |
1.683 | - | - | - | - | 0.733 | 0.950 | Mlig455_069640 {REF} {Length: 2739} {Pfam: Mab-21 protein [PF03281.16, score=23.9]} {RNA1509_26281} {RNA1310_4721} {RNA815_5358.1} | |
| 6. | MligTC455_02500 | 53 | 1.11 | Mlig455_021873 | Neo: - Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_021873 {REF} {Length: 136} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_13656} {RNA815_1450.1} | |
| 7. | MligTC455_46649 | 100 | 2.09 | Mlig455_023901 | Neo: - Age: Up-Down-Up Region-enriched R2: 5.216/0.00086 |
SLC46A2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_023901 {REF} {Length: 2695} {Pfam: Major Facilitator Superfamily [PF07690.18, score=79.0]} {Human: ENSG00000119457, SLC46A2, solute carrier family 46 member 2, [Score=71.6, Expect=1e-12]} {Mouse: ENSMUSG00000029650, Slc46a3, solute carrier family 46, member 3, [Score=77.4, Expect=1e-14]} {Dmel: FBgn0030576, CG15890, [RH, Score=100, Expect=5e-22]} {Celegans: WBGene00016705, C46C11.2, [RH, Score=95.9, Expect=6e-21]} {Smed: dd_Smed_v6_10822_0_1, dd_Smed_v6_10822_0_1, [Score=344, Expect=1e-113]} {RNA1509_40290} {RNA1310_13436} {RNA815_19265} |
| 8. | MligTC455_32234 | 17 | 0.36 | Mlig455_005702 | Neo: - Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_005702 {REF} {Length: 810} {NoTransDecoderORF} {RNA1509_34199} {RNA1310_27268} {RNA815_5538} | |
| 9. | MligTC455_29001 | 278 | 5.79 | Mlig455_016755 | Neo: - Age: - |
0.962 | - | - | 0.962 | - | - | - | Mlig455_016755 {REF} {Length: 5393} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.1]} {Smed: dd_Smed_v6_13734_0_20, dd_Smed_v6_13734_0_20, [Score=50.1, Expect=1e-07]} {RNA1509_13072} {RNA1310_4523} {RNA815_17419} | |
| 10. | MligTC455_49302 | 35 | 0.73 | Mlig455_058893 | Neo: - Age: - Region-enriched R2: 7.010/0.02859 |
SALL3 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_058893 {REF} {Length: 4285} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.7]; C2H2-type zinc finger [PF13894.8, score=63.9]; Zinc-finger double domain [PF13465.8, score=55.3]; Zinc-finger of C2H2 type [PF12874.9, score=45.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=39.0]} {Human: ENSG00000263310, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000256463, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000277015, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000101115, SALL4, spalt like transcription factor 4, [Score=91.7, Expect=5e-18]; ENSG00000103449, SALL1, spalt like transcription factor 1, [Score=90.1, Expect=1e-17]} {Mouse: ENSMUSG00000024565, Sall3, spalt like transcription factor 3, [Score=92.4, Expect=2e-18]; ENSMUSG00000027547, Sall4, spalt like transcription factor 4, [Score=92.0, Expect=2e-18]; ENSMUSG00000031665, Sall1, spalt like transcription factor 1, [Score=90.1, Expect=1e-17]} {Dmel: FBgn0261648, salm, spalt major, [RH, Score=97.4, Expect=4e-20]} {Celegans: WBGene00004773, sem-4, SEM-4 long form, [RH, Score=97.1, Expect=3e-20]} {Smed: dd_Smed_v6_14176_0_1, dd_Smed_v6_14176_0_1, [RH, Score=121, Expect=2e-28]} {RNA1310_43057} {RNA815_29425} |
| 11. | MligTC455_52280 | 259 | 5.39 | Mlig455_040265, Mlig455_040274 | Neo: - Age: logFC(26M/2M)=-1.013 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_040265 {REF} {Length: 617} {RNA1509_1537} {RNA1310_19960} {RNA815_6565} Mlig455_040274 {REF} {Length: 706} {RNA1509_1537} {RNA1310_85398} {RNA815_32362} |
|
| 12. | MligTC455_48375 | 346 | 7.2 | Mlig455_048021 | Neo: - Age: Down-Up-Up |
FUT6 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_048021 {REF} {Length: 2397} {Pfam: Glycosyltransferase family 10 (fucosyltransferase) C-term [PF00852.21, score=163.4]; Fucosyltransferase, N-terminal [PF17039.7, score=45.5]} {Human: ENSG00000156413, FUT6, fucosyltransferase 6, [Score=127, Expect=9e-33]; ENSG00000130383, FUT5, fucosyltransferase 5, [Score=122, Expect=6e-31]} {Mouse: ENSMUSG00000036587, Fut7, fucosyltransferase 7, [Score=130, Expect=3e-34]} {Dmel: FBgn0036485, FucTA, [Score=121, Expect=3e-30]} {Celegans: WBGene00043986, fut-5, Alpha-(1,3)-fucosyltransferase fut-5, [RH, Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_14363_0_1, dd_Smed_v6_14363_0_1, [Score=140, Expect=1e-37]} {RNA1509_48341} {RNA1310_11254.2} {RNA815_6836} |
| 13. | MligTC455_18593 | 342 | 7.12 | Mlig455_031208 | Neo: - Age: Down-Up-Up |
ETFBKMT | 0.95 | - | - | - | - | 0.950 | - | Mlig455_031208 {REF} {Length: 992} {TRANSSPLICED} {Pfam: Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=41.4]; Methyltransferase small domain [PF05175.16, score=33.6]; Lysine methyltransferase [PF10294.11, score=30.5]; Methyltransferase domain [PF13649.8, score=19.9]; Conserved hypothetical protein 95 [PF03602.17, score=19.5]} {Human: ENSG00000139160, ETFBKMT, electron transfer flavoprotein subunit beta lysine methyltransferase, [RH, Score=138, Expect=5e-39]} {Mouse: ENSMUSG00000039958, Etfbkmt, electron transfer flavoprotein beta subunit lysine methyltransferase, [RH, Score=139, Expect=1e-39]} {Celegans: WBGene00016492, C37A2.6, Electron transfer flavoprotein beta subunit lysine methyltransferase homolog, [RH, Score=129, Expect=7e-36]} {RNA1509_21581} {RNA1310_32903, RNA1509_21581} {RNA1509_21581, RNA815_16606} |
| 14. | MligTC455_32424 | 611 | 12.73 | Mlig455_031894, Mlig455_061292, Mlig455_064662 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_031894 {REF} {Length: 1087} {RNA1509_52975} {RNA1310_17621} Mlig455_061292 {REF} {Length: 179} {NoTransDecoderORF} {RNA1509_52975} {RNA1310_115556} Mlig455_064662 {REF} {Length: 1953} {RNA1509_52975} {RNA1310_17621} {RNA815_50584} |