Data search
Results for MligTC455_28335
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28335 | 535 | 11.15 | Mlig455_036210, Mlig455_043836 | Neo: - Age: Down-Up-Down |
Mlig455_036210 {REF} {Length: 2133} {TRANSSPLICED} {RNA1509_17829} {RNA1310_2040.1} {RNA815_23112} Mlig455_043836 {REF} {Length: 2125} {TRANSSPLICED} {RNA1509_17829} {RNA1310_2040.1} {RNA815_23112} |
Cumulative graph for MligTC455_28335
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.354 | 3.801 | 0.38344 | 1.00000 | |
| RegionR2 | 0.51 | 3.801 | 0.48292 | 0.86669 | |
| RegionR3 | 0.044 | 3.801 | 0.94127 | 1.00000 | |
| RegionR4 | -0.207 | 3.801 | 0.76831 | 1.00000 | |
| RegionR5 | -0.143 | 3.801 | 0.80932 | 1.00000 | |
| RegionR6 | -0.373 | 3.801 | 0.56809 | 1.00000 | |
| RegionR7 | 1.839 | 3.801 | 0.00205 | 0.05760 | |
| RegionR8 | -0.315 | 3.801 | 0.74747 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.494 | 3.801 | 0.31627 | 1.00000 | |
| RegenerationR2 | 0.323 | 3.801 | 0.63947 | 0.93099 | |
| RegenerationR3 | 0.386 | 3.801 | 0.59640 | 0.90649 | |
| RegenerationR4 | 0.249 | 3.801 | 0.73051 | 0.96473 | |
| RegenerationR5 | 1.244 | 3.801 | 0.08149 | 0.44298 | |
| RegenerationR6 | 1.491 | 3.801 | 0.03763 | 0.24216 | |
| RegenerationBL | 1.108 | 3.801 | 0.09902 | 0.36991 | |
| RegenerationTP | -0.231 | 3.801 | 0.78378 | 1.00000 |
Genes with expression patterns similar to MligTC455_28335
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28335 | 535 | 11.15 | Mlig455_036210, Mlig455_043836 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_036210 {REF} {Length: 2133} {TRANSSPLICED} {RNA1509_17829} {RNA1310_2040.1} {RNA815_23112} Mlig455_043836 {REF} {Length: 2125} {TRANSSPLICED} {RNA1509_17829} {RNA1310_2040.1} {RNA815_23112} |
|
| 2. | MligTC455_43230 | 1406 | 29.28 | Mlig455_053409 | Neo: - Age: - Region-enriched R8: 2.330/0.00584 Regeneration-upregulated BL: 1.849 Regeneration-enriched BL: 1.849 |
1.702 | - | - | 0.751 | - | - | 0.951 | Mlig455_053409 {REF} {Length: 4778} {RNA1509_11530} {RNA1310_21003, RNA1509_11530} {RNA1509_11530, RNA815_13912} | |
| 3. | MligTC455_46382 | 432 | 8.99 | Mlig455_054911, Mlig455_065626 | Neo: - Age: - |
RBFOX2 | 1.687 | - | - | - | - | 0.729 | 0.958 | Mlig455_054911 {REF} {Length: 2087} {RNA1509_52851} {RNA1310_5883.1} {RNA815_53617} Mlig455_065626 {REF} {Length: 2546} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=63.6]} {Human: ENSG00000277564, RBFOX2, RNA binding fox-1 homolog 2, [Score=139, Expect=8e-39]; ENSG00000100320, RBFOX2, RNA binding fox-1 homolog 2, [Score=139, Expect=8e-39]; ENSG00000078328, RBFOX1, RNA binding fox-1 homolog 1, [Score=135, Expect=2e-38]} {Mouse: ENSMUSG00000033565, Rbfox2, RNA binding protein, fox-1 homolog (C. elegans) 2, [Score=139, Expect=4e-39]; ENSMUSG00000008658, Rbfox1, RNA binding protein, fox-1 homolog (C. elegans) 1, [Score=136, Expect=1e-37]} {Dmel: FBgn0052062, Rbfox1, RNA-binding Fox protein 1, [Score=127, Expect=6e-34]} {Celegans: WBGene00011279, asd-1, RNA-binding protein ASD-1, [Score=112, Expect=2e-29]} {Smed: dd_Smed_v6_9461_0_1, dd_Smed_v6_9461_0_1, [Score=139, Expect=3e-39]} {RNA1509_52851} {RNA1310_5883.1} {RNA815_34912} |
| 4. | MligTC455_52181 | 7 | 0.15 | Mlig455_014956 | Neo: - Age: - |
0.959 | - | - | - | 0.959 | - | - | Mlig455_014956 {REF} {Length: 717} {NoTransDecoderORF} {RNA1509_59012} {RNA1310_70807} {RNA815_13116} | |
| 5. | MligTC455_27662 | 170 | 3.55 | Mlig455_014564, Mlig455_014962, Mlig455_014963, Mlig455_070248 | Neo: - Age: Up-Down-Down |
0.954 | - | - | - | - | - | 0.954 | Mlig455_014564 {REF} {Length: 1355} {RNA1509_33929} {RNA1310_54610} {RNA815_10554.1} Mlig455_014962 {REF} {Length: 1351} {RNA1509_33929} {RNA1310_54610} {RNA815_10554.1} Mlig455_014963 {REF} {Length: 1031} {RNA1509_24537} {RNA1310_130561} Mlig455_070248 {REF} {Length: 2735} {RNA1509_24537, RNA1509_33929} {RNA1310_54610, RNA1509_24537} {RNA1509_24537, RNA815_10554.1} |
|
| 6. | MligTC455_52724 | 529 | 11.02 | Mlig455_032117 | Neo: - Age: logFC(26M/2M)=-0.559 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_032117 {REF} {Length: 5133} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=57.3]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.1]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=135, Expect=3e-36]} {RNA1509_41314} {RNA1310_23090.1} {RNA815_9794.1} |
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