Data search


search
Exact
Search

Results for MligTC455_28393

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28393 77 1.61 Mlig455_041474, Mlig455_041506

Neo: -

Age: -

Mlig455_041474 {REF} {Length: 589} {RNA1310_96657} {RNA815_52352}

Mlig455_041506 {REF} {Length: 589} {RNA1310_96657} {RNA815_52352}

Cumulative graph for MligTC455_28393

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.818 1.791 0.99989 1.00000
RegionR2 0.914 1.791 0.55524 0.91923
RegionR3 2.628 1.791 0.02393 0.26363
RegionR4 -0.36 1.791 0.86504 1.00000
RegionR5 0.91 1.791 0.44475 0.80622
RegionR6 1.738 1.791 0.18952 0.75558
RegionR7 2.498 1.791 0.07767 0.53753
RegionR8 -3.509 1.791 0.99978 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.795 1.791 0.99990 1.00000
RegenerationR2 3.276 1.791 0.00560 0.11867
RegenerationR3 2.581 1.791 0.01905 0.25277
RegenerationR4 3.357 1.791 0.01015 0.15257
RegenerationR5 3.09 1.791 0.00484 0.12618
RegenerationR6 0.553 1.791 0.65421 0.90032
RegenerationBL -1.395 1.791 0.99955 1.00000
RegenerationTP 2.861 1.791 0.21370 0.65648


Genes with expression patterns similar to MligTC455_28393

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28393 77 1.61 Mlig455_041474, Mlig455_041506

Neo: -

Age: -

5 1.000 1.000 - 1.000 1.000 1.000

Mlig455_041474 {REF} {Length: 589} {RNA1310_96657} {RNA815_52352}

Mlig455_041506 {REF} {Length: 589} {RNA1310_96657} {RNA815_52352}
2. MligTC455_23023 631 13.15 Mlig455_030601

Neo: -

Age: -

CYTH2 1.694 - - - 0.955 0.739 - Mlig455_030601 {REF} {Length: 4787} {TRANSSPLICED} {Pfam: Sec7 domain [PF01369.22, score=173.6]; PH domain [PF00169.31, score=69.9]; Pleckstrin homology domain [PF15413.8, score=31.6]} {Human: ENSG00000105443, CYTH2, cytohesin 2, [RH, Score=246, Expect=1e-77]; ENSG00000108669, CYTH1, cytohesin 1, [RH, Score=245, Expect=4e-77]; ENSG00000008256, CYTH3, cytohesin 3, [RH, Score=242, Expect=7e-76]} {Mouse: ENSMUSG00000003269, Cyth2, cytohesin 2, [RH, Score=247, Expect=6e-78]; ENSMUSG00000017132, Cyth1, cytohesin 1, [RH, Score=246, Expect=1e-77]; ENSMUSG00000018001, Cyth3, cytohesin 3, [RH, Score=241, Expect=1e-75]} {Dmel: FBgn0086779, step, steppke, [RH, Score=261, Expect=2e-83]} {Celegans: WBGene00001743, grp-1, GTP exchange factor for ARFs 1, [RH, Score=184, Expect=5e-54]} {Smed: dd_Smed_v6_9423_0_1, dd_Smed_v6_9423_0_1, [Score=94.0, Expect=1e-20]} {RNA1509_13101, RNA1509_20814, RNA1509_48555} {RNA1310_11521.2, RNA1509_13101, RNA1509_20814} {RNA1509_13101, RNA1509_20814, RNA815_6905.1}
3. MligTC455_15155 24 0.5 Mlig455_036661

Neo: -

Age: -

0.991 - - - - 0.991 - Mlig455_036661 {REF} {Length: 2246} {TRANSSPLICED} {RNA1310_29694.1} {RNA815_29887}
4. MligTC455_32880 79 1.65 Mlig455_070625

Neo: -

Age: -

Region-enriched R5: 6.052/0.00000

0.984 - - - 0.984 - - Mlig455_070625 {REF} {Length: 2275} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}
5. MligTC455_23832 810 16.87 Mlig455_063141

Neo: -

Age: -

Region-enriched R5: 4.323/0.00000

GLIPR1L1 0.982 - - - 0.982 - - Mlig455_063141 {REF} {Length: 525} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=82.5]} {Human: ENSG00000173401, GLIPR1L1, GLIPR1 like 1, [RH, Score=115, Expect=3e-31]} {Mouse: ENSMUSG00000020213, Glipr1l1, GLI pathogenesis-related 1 like 1, [RH, Score=125, Expect=3e-35]; ENSMUSG00000112611, Glipr1l3, GLI pathogenesis-related 1 like 3, [RH, Score=122, Expect=3e-34]} {Dmel: FBgn0038126, CG8483, [RH, Score=124, Expect=9e-34]} {Celegans: WBGene00009892, scl-11, SCP-Like extracellular protein, [RH, Score=87.4, Expect=2e-21]} {Smed: dd_Smed_v6_6756_0_1, dd_Smed_v6_6756_0_1, [RH, Score=156, Expect=2e-48]} {RNA1509_46434} {RNA1310_33197} {RNA815_16738}
6. MligTC455_06252 20 0.42 Mlig455_050158

Neo: -

Age: -

0.978 - - - - 0.978 - Mlig455_050158 {REF} {Length: 761} {NoTransDecoderORF} {RNA1310_135845}
7. MligTC455_39912 126 2.62 Mlig455_005780

Neo: -

Age: logFC(26M/2M)=0.297

IST1 0.975 - - - - 0.975 - Mlig455_005780 {REF} {Length: 2185} {Pfam: Regulator of Vps4 activity in the MVB pathway [PF03398.16, score=202.0]} {Human: ENSG00000182149, IST1, IST1, ESCRT-III associated factor, [RH, Score=287, Expect=1e-95]} {Mouse: ENSMUSG00000031729, Ist1, increased sodium tolerance 1 homolog (yeast), [RH, Score=266, Expect=3e-87]} {Dmel: FBgn0035715, CG10103, [RH, Score=248, Expect=2e-79]} {Celegans: WBGene00010736, istr-1, Increased Sodium Tolerance Related, [RH, Score=244, Expect=6e-78]} {Smed: dd_Smed_v6_2006_0_1, dd_Smed_v6_2006_0_1, [RH, Score=287, Expect=2e-96]} {RNA1509_4021} {RNA1310_50949.1} {RNA815_14394.1}
8. MligTC455_32027 16 0.34 Mlig455_035199

Neo: -

Age: -

Region-enriched R7: 5.354/0.00914

SETMAR 0.973 - - - - 0.973 - Mlig455_035199 {REF} {Length: 1470} {Pfam: DDE superfamily endonuclease [PF13358.8, score=37.1]; Homeodomain-like domain [PF13565.8, score=27.8]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=24.9]; HTH domain in Mos1 transposase [PF17906.3, score=21.1]; Transposase [PF01498.20, score=18.9]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=95.9, Expect=4e-21]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [RH, Score=64.7, Expect=6e-13]} {RNA1509_9634} {RNA1310_4459.1} {RNA815_18810}
9. MligTC455_39577 25 0.53 Mlig455_051907

Neo: Int S/G2/M

Age: -

0.97 - - - - 0.970 - Mlig455_051907 {REF} {Length: 2274} {NoTransDecoderORF} {RNA1509_3168} {RNA1310_34505} {RNA815_39867}
10. MligTC455_31813 5 0.11 Mlig455_006758, Mlig455_019241

Neo: -

Age: -

0.966 - - - - 0.966 -

Mlig455_006758 {REF} {Length: 3990} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=122.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=68.2, Expect=2e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_6291.1}

Mlig455_019241 {REF} {Length: 2474} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=112.3]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=62.8, Expect=1e-11]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}
11. MligTC455_35307 38 0.79 Mlig455_012667

Neo: -

Age: Up-Down-Down

SLC12A9 0.966 - - - - 0.966 - Mlig455_012667 {REF} {Length: 2914} {Pfam: Amino acid permease [PF00324.23, score=25.1]} {Human: ENSG00000146828, SLC12A9, solute carrier family 12 member 9, [Score=63.5, Expect=2e-12]} {Mouse: ENSMUSG00000037344, Slc12a9, solute carrier family 12 (potassium/chloride transporters), member 9, [Score=65.1, Expect=4e-13]} {Dmel: FBgn0032689, CG10413, [Score=87.0, Expect=7e-21]} {Celegans: WBGene00020207, T04B8.5, [Score=88.6, Expect=1e-21]} {Smed: dd_Smed_v6_1738_0_6, dd_Smed_v6_1738_0_6, [Score=101, Expect=3e-26]} {RNA1509_47734} {RNA1310_20621} {RNA815_24306}
12. MligTC455_35470 85 1.76 Mlig455_053182

Neo: -

Age: -

FPGS 0.965 - - - 0.965 - - Mlig455_053182 {REF} {Length: 3458} {TRANSSPLICED} {Human: ENSG00000136877, FPGS, folylpolyglutamate synthase, [Score=202, Expect=2e-60]} {Mouse: ENSMUSG00000009566, Fpgs, folylpolyglutamyl synthetase, [Score=201, Expect=9e-60]} {Dmel: FBgn0030407, CG2543, [Score=154, Expect=1e-42]} {Celegans: WBGene00017777, F25B5.6, Putative folylpolyglutamate synthase, [Score=154, Expect=3e-43]} {Smed: dd_Smed_v6_6956_0_1, dd_Smed_v6_6956_0_1, [Score=174, Expect=2e-50]} {RNA1509_52653} {RNA1310_12883} {RNA815_5992.1}
13. MligTC455_41435 246 5.12 Mlig455_030272, Mlig455_057575

Neo: -

Age: -

Region-enriched R3: 3.359/0.01214
Region-enriched R4: 3.160/0.04631
Region-enriched R5: 2.910/0.01374

0.963 - - - 0.963 - -

Mlig455_030272 {REF} {Length: 3360} {TRANSSPLICED} {Pfam: Mitochondria-eating protein [PF16026.7, score=25.3]} {RNA1509_23848} {RNA1310_18693} {RNA815_6904}

Mlig455_057575 {REF} {Length: 3377} {TRANSSPLICED} {RNA1509_23848} {RNA1310_18693, RNA1509_23848} {RNA1509_23848, RNA815_6904}
14. MligTC455_42886 494 10.29 Mlig455_004248

Neo: -

Age: -

AL136295.1 0.963 - - - 0.963 - - Mlig455_004248 {REF} {Length: 3161} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=493.4]} {Human: ENSG00000254692, AL136295.1, novel protein, [RH, Score=692, Expect=0.0]; ENSG00000285502, AL136295.15, novel protein, [RH, Score=692, Expect=0.0]; ENSG00000100926, TM9SF1, transmembrane 9 superfamily member 1, [RH, Score=685, Expect=0.0]; ENSG00000285465, TM9SF1, transmembrane 9 superfamily member 1, [RH, Score=685, Expect=0.0]} {Mouse: ENSMUSG00000002320, Tm9sf1, transmembrane 9 superfamily member 1, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [Score=332, Expect=3e-106]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [Score=346, Expect=9e-112]} {Smed: dd_Smed_v6_4115_0_1, dd_Smed_v6_4115_0_1, [RH, Score=618, Expect=0.0]} {RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407} {RNA1310_10868, RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407} {RNA1509_11922, RNA1509_20805, RNA1509_23244, RNA1509_47900, RNA1509_57407, RNA815_2853}
15. MligTC455_36132 41 0.86 Mlig455_069660

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.522

0.961 - - - - 0.961 - Mlig455_069660 {REF} {Length: 4786} {RNA1509_50856} {RNA1310_3723} {RNA815_27362}
16. MligTC455_47767 1039 21.64 Mlig455_020295

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.285

Region-enriched R5: 4.227/0.00003
Region-enriched R6: 3.135/0.02546

ZC3H4 0.961 - - - 0.961 - - Mlig455_020295 {REF} {Length: 1254} {Pfam: Zinc finger domain [PF18345.3, score=26.7]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=19.4]} {Human: ENSG00000130749, ZC3H4, zinc finger CCCH-type containing 4, [Score=50.8, Expect=1e-06]} {Mouse: ENSMUSG00000059273, Zc3h4, zinc finger CCCH-type containing 4, [Score=50.8, Expect=9e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [Score=52.4, Expect=1e-07]} {RNA1509_11678, RNA1509_29450, RNA1509_32956} {RNA1310_29721, RNA1509_11678, RNA1509_29450, RNA1509_32956} {RNA1509_11678, RNA1509_29450, RNA1509_32956, RNA815_27827}
17. MligTC455_35469 92 1.91 Mlig455_051842

Neo: -

Age: -

FPGS 0.96 - - - 0.960 - - Mlig455_051842 {REF} {Length: 3813} {TRANSSPLICED} {Pfam: Mur ligase family, glutamate ligase domain [PF02875.23, score=19.6]} {Human: ENSG00000136877, FPGS, folylpolyglutamate synthase, [RH, Score=321, Expect=1e-102]} {Mouse: ENSMUSG00000009566, Fpgs, folylpolyglutamyl synthetase, [RH, Score=310, Expect=6e-99]} {Dmel: FBgn0030407, CG2543, [RH, Score=247, Expect=5e-75]} {Celegans: WBGene00017777, F25B5.6, Putative folylpolyglutamate synthase, [RH, Score=273, Expect=2e-85]} {Smed: dd_Smed_v6_6956_0_1, dd_Smed_v6_6956_0_1, [RH, Score=279, Expect=4e-88]} {RNA1509_52653} {RNA1310_12883} {RNA815_5992.1}
18. MligTC455_23831 11788 245.59 Mlig455_004244

Neo: Irradiation

Age: logFC(26M/2M)=0.677

Region-enriched R5: 3.391/0.00001

GLIPR1L1 0.958 - - - 0.958 - - Mlig455_004244 {REF} {Length: 1252} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=82.5]} {Human: ENSG00000173401, GLIPR1L1, GLIPR1 like 1, [RH, Score=115, Expect=3e-31]} {Mouse: ENSMUSG00000020213, Glipr1l1, GLI pathogenesis-related 1 like 1, [RH, Score=125, Expect=3e-35]; ENSMUSG00000112611, Glipr1l3, GLI pathogenesis-related 1 like 3, [RH, Score=122, Expect=3e-34]} {Dmel: FBgn0038126, CG8483, [RH, Score=124, Expect=9e-34]} {Celegans: WBGene00009892, scl-11, SCP-Like extracellular protein, [RH, Score=87.4, Expect=2e-21]} {Smed: dd_Smed_v6_6756_0_1, dd_Smed_v6_6756_0_1, [RH, Score=156, Expect=2e-48]} {RNA1509_2231, RNA1509_234, RNA1509_46275, RNA1509_46434} {RNA1310_33197, RNA1509_2231, RNA1509_234, RNA1509_46275, RNA1509_46434} {RNA1509_2231, RNA1509_234, RNA1509_46275, RNA1509_46434, RNA815_16738}
19. MligTC455_36131 40 0.83 Mlig455_062116

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_062116 {REF} {Length: 4796} {RNA1509_50856} {RNA1310_3723} {RNA815_27362}
20. MligTC455_19243 94 1.96 Mlig455_048214

Neo: -

Age: -

Region-enriched R3: 3.438/0.03435
Region-enriched R5: 2.987/0.00981

0.957 - - - - - 0.957 Mlig455_048214 {REF} {Length: 2496} {RNA1509_28510} {RNA1310_39619, RNA1509_28510} {RNA1509_28510, RNA815_161}
21. MligTC455_35143 2399 49.98 Mlig455_041953

Neo: Germline

Age: -

Region-specific R5: 4.896

Region-enriched R5: 3.879/0.00000

CAPN8 0.955 - - - 0.955 - - Mlig455_041953 {REF} {Length: 5069} {Pfam: Calpain family cysteine protease [PF00648.23, score=386.5]; Calpain large subunit, domain III [PF01067.24, score=105.3]} {Human: ENSG00000203697, CAPN8, calpain 8, [Score=373, Expect=1e-116]; ENSG00000135773, CAPN9, calpain 9, [Score=367, Expect=2e-114]} {Mouse: ENSMUSG00000038599, Capn8, calpain 8, [Score=379, Expect=3e-119]; ENSMUSG00000031981, Capn9, calpain 9, [Score=363, Expect=4e-113]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=390, Expect=2e-125]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=345, Expect=3e-106]} {Smed: dd_Smed_v6_1971_0_3, dd_Smed_v6_1971_0_3, [Score=434, Expect=2e-140]} {RNA1509_4449} {RNA1310_5632} {RNA815_1618.1}
22. MligTC455_35144 828 17.25 Mlig455_042024

Neo: Germline

Age: -

Region-specific R5: 4.022

Region-enriched R5: 3.233/0.00000

0.955 - - - 0.955 - - Mlig455_042024 {REF} {Length: 3147} {RNA1509_17316, RNA1509_4449, RNA1509_51282} {RNA1310_5632, RNA1509_4449, RNA1509_51282} {RNA1509_4449, RNA1509_51282, RNA815_1618.1}
23. MligTC455_10493 81 1.69 Mlig455_004006, Mlig455_004088

Neo: -

Age: Up-Down-Down

0.954 - - - 0.954 - -

Mlig455_004006 {REF} {Length: 3636} {RNA1509_5254} {RNA1310_52867.1} {RNA815_44736}

Mlig455_004088 {REF} {Length: 1590} {RNA1509_10236} {RNA1310_52867.1} {RNA815_44736}
24. MligTC455_37952 38 0.79 Mlig455_024539

Neo: -

Age: -

GNB1L 0.954 - - - - 0.954 - Mlig455_024539 {REF} {Length: 2044} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=39.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.4]} {Human: ENSG00000185838, GNB1L, G protein subunit beta 1 like, [RH, Score=110, Expect=3e-27]} {Mouse: ENSMUSG00000000884, Gnb1l, guanine nucleotide binding protein (G protein), beta polypeptide 1-like, [RH, Score=115, Expect=2e-29]} {Dmel: FBgn0033653, CG13192, [RH, Score=74.7, Expect=6e-15]} {Smed: dd_Smed_v6_9087_0_1, dd_Smed_v6_9087_0_1, [RH, Score=68.2, Expect=6e-13]} {RNA1509_25342} {RNA1310_63202} {RNA815_29154}
25. MligTC455_37462 1583 32.97 Mlig455_042112

Neo: Germline

Age: -

Region-enriched R5: 4.197/0.00000

COL12A1 0.952 - - - 0.952 - - Mlig455_042112 {REF} {Length: 3600} {Pfam: von Willebrand factor type A domain [PF00092.30, score=78.8]; von Willebrand factor type A domain [PF13519.8, score=40.1]} {Human: ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [Score=72.0, Expect=5e-12]} {Mouse: ENSMUSG00000032332, Col12a1, collagen, type XII, alpha 1, [Score=74.7, Expect=4e-13]} {Celegans: WBGene00003482, mua-3, Transmembrane cell adhesion receptor mua-3, [Score=50.8, Expect=5e-06]} {RNA1509_1392} {RNA1310_1560.1, RNA1509_1392} {RNA1509_1392, RNA815_476}
26. MligTC455_44272 5757 119.94 Mlig455_030617

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R2: 3.907/0.00436
Region-enriched R5: 3.803/0.00000
Region-enriched R6: 2.387/0.04850

0.952 - - - 0.952 - - Mlig455_030617 {REF} {Length: 1626} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.1}
27. MligTC455_44273 11418 237.87 Mlig455_030693, Mlig455_031024

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R2: 4.028/0.00635
Region-enriched R5: 3.738/0.00003

POLR2A 0.952 - - - 0.952 - -

Mlig455_030693 {REF} {Length: 1801} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [Score=61.2, Expect=1e-09]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=67.0, Expect=1e-11]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [Score=66.6, Expect=1e-11]} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.4}

Mlig455_031024 {REF} {Length: 1675} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.4}
28. MligTC455_55844 6 0.12 Mlig455_070252

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_070252 {REF} {Length: 1766} {Pfam: C2 domain [PF00168.32, score=30.3]} {RNA1310_115466}
29. MligTC455_01511 15 0.3 Mlig455_058703

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_058703 {REF} {Length: 181} {NoTransDecoderORF}
30. MligTC455_08171 40 0.83 Mlig455_026527, Mlig455_032833

Neo: -

Age: -

0.951 - - - 0.951 - -

Mlig455_026527 {REF} {Length: 198} {NoTransDecoderORF} {RNA1310_39508}

Mlig455_032833 {REF} {Length: 268} {NoTransDecoderORF} {RNA1310_39508}
31. MligTC455_12771 7 0.15 Mlig455_016772, Mlig455_016790

Neo: -

Age: -

SNRNP200 0.951 - - - - 0.951 -

Mlig455_016772 {REF} {Length: 3665} {TRANSSPLICED} {Pfam: Sec63 Brl domain [PF02889.18, score=193.2]; N-terminal helicase PWI domain [PF18149.3, score=126.3]; DEAD/DEAH box helicase [PF00270.31, score=100.4]; Type III restriction enzyme, res subunit [PF04851.17, score=53.1]; Helicase conserved C-terminal domain [PF00271.33, score=33.4]} {Human: ENSG00000144028, SNRNP200, small nuclear ribonucleoprotein U5 subunit 200, [RH, Score=1464, Expect=0.0]} {Mouse: ENSMUSG00000003660, Snrnp200, small nuclear ribonucleoprotein 200 (U5), [RH, Score=1463, Expect=0.0]} {Dmel: FBgn0263599, l(3)72Ab, lethal (3) 72Ab, [RH, Score=1491, Expect=0.0]} {Celegans: WBGene00012896, snrp-200, Putative U5 small nuclear ribonucleoprotein 200 kDa helicase, [RH, Score=1343, Expect=0.0]} {Smed: dd_Smed_v6_3022_0_1, dd_Smed_v6_3022_0_1, [Score=1068, Expect=0.0]} {RNA1509_1464} {RNA1310_469.1} {RNA815_1013}

Mlig455_016790 {REF} {Length: 4734} {TRANSSPLICED} {Pfam: Sec63 Brl domain [PF02889.18, score=191.5]; N-terminal helicase PWI domain [PF18149.3, score=125.4]; DEAD/DEAH box helicase [PF00270.31, score=100.2]; Type III restriction enzyme, res subunit [PF04851.17, score=51.4]; Helicase conserved C-terminal domain [PF00271.33, score=33.3]} {Human: ENSG00000144028, SNRNP200, small nuclear ribonucleoprotein U5 subunit 200, [RH, Score=1432, Expect=0.0]} {Mouse: ENSMUSG00000003660, Snrnp200, small nuclear ribonucleoprotein 200 (U5), [RH, Score=1431, Expect=0.0]} {Dmel: FBgn0263599, l(3)72Ab, lethal (3) 72Ab, [RH, Score=1460, Expect=0.0]} {Celegans: WBGene00012896, snrp-200, Putative U5 small nuclear ribonucleoprotein 200 kDa helicase, [RH, Score=1316, Expect=0.0]} {Smed: dd_Smed_v6_3022_0_1, dd_Smed_v6_3022_0_1, [Score=1039, Expect=0.0]} {RNA1509_1464, RNA1509_37558} {RNA1310_469.1, RNA1509_1464, RNA1509_37558} {RNA1509_1464, RNA1509_37558, RNA815_1013}
32. MligTC455_30665 1011 21.06 Mlig455_035414

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.994

Region-enriched R3: 2.264/0.00009

PTPRJ 0.95 - - - 0.950 - - Mlig455_035414 {REF} {Length: 7812} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=221.9]; Fibronectin type III domain [PF00041.23, score=166.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=22.4]; ARID/BRIGHT DNA binding domain [PF01388.23, score=20.4]} {Human: ENSG00000149177, PTPRJ, protein tyrosine phosphatase, receptor type J, [Score=189, Expect=1e-47]; ENSG00000127329, PTPRB, protein tyrosine phosphatase, receptor type B, [Score=187, Expect=7e-47]; ENSG00000081237, PTPRC, protein tyrosine phosphatase, receptor type C, [Score=186, Expect=7e-47]; ENSG00000080031, PTPRH, protein tyrosine phosphatase, receptor type H, [Score=185, Expect=1e-46]; ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=181, Expect=5e-45]; ENSG00000151490, PTPRO, protein tyrosine phosphatase, receptor type O, [Score=180, Expect=4e-45]} {Mouse: ENSMUSG00000026395, Ptprc, protein tyrosine phosphatase, receptor type, C, [Score=189, Expect=9e-48]; ENSMUSG00000025314, Ptprj, protein tyrosine phosphatase, receptor type, J, [Score=186, Expect=4e-47]; ENSMUSG00000035429, Ptprh, protein tyrosine phosphatase, receptor type, H, [Score=181, Expect=6e-46]; ENSMUSG00000020154, Ptprb, protein tyrosine phosphatase, receptor type, B, [Score=180, Expect=7e-45]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=169, Expect=3e-42]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=173, Expect=2e-46]} {Smed: dd_Smed_v6_768_0_1, dd_Smed_v6_768_0_1, [RH, Score=201, Expect=8e-52]} {RNA1509_34558, RNA1509_50479, RNA1509_58370} {RNA1310_3303.1, RNA1509_34558, RNA1509_50479, RNA1509_58370} {RNA1509_34558, RNA1509_50479, RNA1509_58370, RNA815_718.1}
33. MligTC455_34556 5096 106.16 Mlig455_058024

Neo: Germline

Age: Down-Up-Down

Region-enriched R5: 3.423/0.00000

0.95 - - - 0.950 - - Mlig455_058024 {REF} {Length: 968} {Pfam: Keratin type II head [PF16208.7, score=19.8]} {RNA1509_24264, RNA1509_2674} {RNA1310_41167, RNA1509_2674} {RNA1509_2674, RNA815_12035.2}
34. MligTC455_34865 1660 34.59 Mlig455_006267

Neo: Irradiation

Age: -

Region-enriched R5: 3.915/0.00000

0.95 - - - 0.950 - - Mlig455_006267 {REF} {Length: 9839} {RNA1509_471} {RNA1310_114.1} {RNA815_59}
35. MligTC455_49621 739 15.39 Mlig455_057985

Neo: -

Age: logFC(26M/2M)=0.320

SFT2D2 0.95 - - - 0.950 - - Mlig455_057985 {REF} {Length: 2439} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=100.2]} {Human: ENSG00000213064, SFT2D2, SFT2 domain containing 2, [Score=181, Expect=2e-58]} {Mouse: ENSMUSG00000040848, Sft2d2, SFT2 domain containing 2, [Score=179, Expect=7e-58]} {Dmel: FBgn0037009, CG5104, [Score=174, Expect=5e-56]} {Celegans: WBGene00009191, F27D4.7, Vesicle transport protein, [Score=82.0, Expect=4e-20]} {Smed: dd_Smed_v6_3839_0_1, dd_Smed_v6_3839_0_1, [Score=179, Expect=2e-58]} {RNA1509_15408} {RNA1310_54102.1} {RNA815_20933}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA