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Results for MligTC455_28404

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28404 40 0.83 Mlig455_023211, Mlig455_064139

Neo: -

Age: -

Mlig455_023211 {REF} {Length: 593} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=26.2]} {RNA1310_71559}

Mlig455_064139 {REF} {Length: 3383} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=24.2]} {RNA1509_10472} {RNA1310_41467} {RNA815_52086}

Cumulative graph for MligTC455_28404

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.828 1.027 0.99962 1.00000
RegionR2 1.498 1.027 0.42534 0.81580
RegionR3 1.542 1.027 0.34135 0.87793
RegionR4 0.952 1.027 0.47573 0.80351
RegionR5 0.529 1.027 0.59150 0.94938
RegionR6 -1.429 1.027 0.97184 1.00000
RegionR7 -1.702 1.027 0.99978 1.00000
RegionR8 -0.562 1.027 0.99985 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.15 1.027 0.50813 1.00000
RegenerationR2 -0.348 1.027 0.79574 0.98823
RegenerationR3 0.59 1.027 0.69674 0.94668
RegenerationR4 -0.254 1.027 0.95954 1.00000
RegenerationR5 0.583 1.027 0.65279 0.93324
RegenerationR6 1.238 1.027 0.49712 0.80392
RegenerationBL 1.637 1.027 0.42667 0.79497
RegenerationTP 2.986 1.027 0.30411 0.74943


Genes with expression patterns similar to MligTC455_28404

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28404 40 0.83 Mlig455_023211, Mlig455_064139

Neo: -

Age: -

 3 - - 1.000 - 1.000 1.000

Mlig455_023211 {REF} {Length: 593} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=26.2]} {RNA1310_71559}

Mlig455_064139 {REF} {Length: 3383} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=24.2]} {RNA1509_10472} {RNA1310_41467} {RNA815_52086}
2. MligTC455_47784 987 20.56 Mlig455_042427, Mlig455_042482

Neo: Irradiation

Age: Down-Up-Down

 LPIN3 1.714 - - 0.749 - 0.965 -

Mlig455_042427 {REF} {Length: 3949} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=315.0]; lipin, N-terminal conserved region [PF04571.16, score=124.4]; Lipin/Ned1/Smp2 multi-domain protein middle domain [PF16876.7, score=88.2]} {Human: ENSG00000132793, LPIN3, lipin 3, [RH, Score=447, Expect=2e-144]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [RH, Score=441, Expect=3e-142]; ENSMUSG00000020593, Lpin1, lipin 1, [RH, Score=427, Expect=2e-136]} {Dmel: FBgn0263593, Lpin, Lipin, [RH, Score=355, Expect=2e-108]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [RH, Score=255, Expect=2e-73]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [RH, Score=407, Expect=1e-130]} {RNA1509_2460} {RNA1310_4371} {RNA815_2379.1}

Mlig455_042482 {REF} {Length: 3845} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=315.1]; Lipin/Ned1/Smp2 multi-domain protein middle domain [PF16876.7, score=88.3]; lipin, N-terminal conserved region [PF04571.16, score=87.5]} {Human: ENSG00000132793, LPIN3, lipin 3, [RH, Score=414, Expect=5e-132]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [RH, Score=401, Expect=2e-127]} {Dmel: FBgn0263593, Lpin, Lipin, [RH, Score=355, Expect=6e-109]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [RH, Score=255, Expect=1e-73]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [RH, Score=407, Expect=2e-131]} {RNA1509_2460, RNA1509_26861, RNA1509_31871, RNA1509_42018} {RNA1310_4371, RNA1509_26861, RNA1509_31871, RNA1509_42018} {RNA1509_26861, RNA1509_31871, RNA1509_42018, RNA815_2379.1}
3. MligTC455_36479 13824 287.99 Mlig455_036896

Neo: -

Age: logFC(26M/2M)=-0.530

 1.674 - - - - 0.963 0.711 Mlig455_036896 {REF} {Length: 838} {RNA1509_12581, RNA1509_1307, RNA1509_24146} {RNA1310_40612.4, RNA1509_12581, RNA1509_1307, RNA1509_24146} {RNA1509_12581, RNA1509_1307, RNA1509_24146, RNA815_33159.2}
4. MligTC455_15189 30 0.63 Mlig455_068662

Neo: -

Age: -

 1.662 - - 0.950 - - 0.712 Mlig455_068662 {REF} {Length: 1194} {Pfam: Cupin-like domain [PF13621.8, score=39.8]} {Dmel: FBgn0038510, CG14331, [Score=148, Expect=1e-41]} {Celegans: WBGene00004205, psr-1, Bifunctional arginine demethylase and lysyl-hydroxylase psr-1, [Score=49.7, Expect=1e-06]} {Smed: dd_Smed_v6_8235_0_1, dd_Smed_v6_8235_0_1, [Score=139, Expect=5e-38]} {RNA1509_3781} {RNA1310_5604.1} {RNA815_2493.1}
5. MligTC455_19761 138 2.87 Mlig455_014482

Neo: -

Age: -

 TLL1 0.982 - - - - 0.982 - Mlig455_014482 {REF} {Length: 2610} {Pfam: CUB domain [PF00431.22, score=133.6]; CUB-like domain [PF02408.22, score=39.7]} {Human: ENSG00000038295, TLL1, tolloid like 1, [Score=88.2, Expect=2e-17]} {Mouse: ENSMUSG00000047517, Dmbt1, deleted in malignant brain tumors 1, [Score=139, Expect=2e-33]} {Dmel: FBgn0003719, tld, tolloid, [Score=59.7, Expect=6e-09]} {Celegans: WBGene00013855, ZC116.3, Probable cubilin, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=96.7, Expect=1e-20]} {RNA1509_60025} {RNA1310_15896, RNA1509_60025} {RNA1509_60025, RNA815_23387}
6. MligTC455_32300 256 5.34 Mlig455_036534

Neo: -

Age: -

Region-enriched R2: 2.018/0.04615

 0.982 - - - - 0.982 - Mlig455_036534 {REF} {Length: 3738} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [Score=88.2, Expect=4e-20]} {RNA1509_24553, RNA1509_27954} {RNA1310_25241.1, RNA1509_24553, RNA1509_27954} {RNA1509_24553, RNA1509_27954, RNA815_10356}
7. MligTC455_39836 51 1.07 Mlig455_024613

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_024613 {REF} {Length: 689} {NoTransDecoderORF} {RNA1310_136051} {RNA815_29792}
8. MligTC455_48733 1013 21.11 Mlig455_036104

Neo: -

Age: -

Region-enriched R7: 1.603/0.00772

 MYL12B 0.977 - - - - 0.977 - Mlig455_036104 {REF} {Length: 988} {Pfam: EF-hand domain pair [PF13499.8, score=57.4]; EF-hand domain [PF13405.8, score=43.8]; EF hand [PF00036.34, score=36.8]; EF-hand domain pair [PF13833.8, score=30.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=30.3]; EF hand [PF13202.8, score=22.4]; SurA N-terminal domain [PF13623.8, score=22.0]; EF-hand domain [PF14658.8, score=20.7]} {Human: ENSG00000118680, MYL12B, myosin light chain 12B, [Score=196, Expect=2e-64]; ENSG00000101608, MYL12A, myosin light chain 12A, [Score=194, Expect=8e-64]; ENSG00000101335, MYL9, myosin light chain 9, [Score=192, Expect=3e-63]} {Mouse: ENSMUSG00000117098, AC154187.2, novel protein, [Score=196, Expect=1e-64]; ENSMUSG00000034868, Myl12b, myosin, light chain 12B, regulatory, [Score=196, Expect=1e-64]; ENSMUSG00000024048, Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric, [Score=194, Expect=1e-63]; ENSMUSG00000067818, Myl9, myosin, light polypeptide 9, regulatory, [Score=192, Expect=3e-63]} {Dmel: FBgn0003514, sqh, spaghetti squash, [Score=196, Expect=1e-64]} {Celegans: WBGene00003372, mlc-4, Myosin regulatory light chain, [Score=196, Expect=6e-65]} {Smed: dd_Smed_v6_445_0_1, dd_Smed_v6_445_0_1, [RH, Score=262, Expect=4e-91]} {RNA1509_4429} {RNA1310_36767.1} {RNA815_17952}
9. MligTC455_12797 59 1.23 Mlig455_049659

Neo: -

Age: -

 PCDHA5 0.973 - - - - 0.973 - Mlig455_049659 {REF} {Length: 4667} {Pfam: Cadherin domain [PF00028.19, score=196.7]; Cadherin-like [PF16184.7, score=28.8]; Cadherin-like [PF08266.14, score=24.3]} {Human: ENSG00000204965, PCDHA5, protocadherin alpha 5, [Score=174, Expect=5e-44]; ENSG00000253846, PCDHGA10, protocadherin gamma subfamily A, 10, [Score=169, Expect=3e-42]; ENSG00000165194, PCDH19, protocadherin 19, [Score=166, Expect=4e-41]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=176, Expect=2e-44]; ENSMUSG00000102697, Pcdhac2, protocadherin alpha subfamily C, 2, [Score=169, Expect=3e-42]} {Dmel: FBgn0284247, ds, dachsous, [Score=182, Expect=5e-46]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=154, Expect=2e-37]} {Smed: dd_Smed_v6_12697_0_1, dd_Smed_v6_12697_0_1, [Score=219, Expect=7e-59]} {RNA1509_41935} {RNA1310_16730.1} {RNA815_7760}
10. MligTC455_26620 34 0.7 Mlig455_008129, Mlig455_008132

Neo: -

Age: Up-Down-Down

 0.973 - - - - 0.973 -

Mlig455_008129 {REF} {Length: 1793} {NoTransDecoderORF} {RNA1509_17614} {RNA1310_15562} {RNA815_5625.1}

Mlig455_008132 {REF} {Length: 2431} {NoTransDecoderORF} {RNA1509_17614} {RNA1310_15562} {RNA815_5625.1}
11. MligTC455_39838 117 2.44 Mlig455_061337, Mlig455_062688

Neo: -

Age: Up-Down-Down

Region-enriched R2: 5.720/0.01251

 PROP1 0.971 - - - - 0.971 -

Mlig455_061337 {REF} {Length: 2182} {Pfam: Homeodomain [PF00046.31, score=77.0]} {Human: ENSG00000175325, PROP1, PROP paired-like homeobox 1, [RH, Score=97.8, Expect=9e-23]; ENSG00000274382, PROP1, PROP paired-like homeobox 1, [RH, Score=97.8, Expect=9e-23]} {Mouse: ENSMUSG00000028736, Pax7, paired box 7, [Score=103, Expect=4e-23]; ENSMUSG00000036602, Alx1, ALX homeobox 1, [Score=102, Expect=4e-24]; ENSMUSG00000024518, Rax, retina and anterior neural fold homeobox, [Score=101, Expect=3e-23]; ENSMUSG00000035277, Arx, aristaless related homeobox, [Score=100, Expect=4e-22]; ENSMUSG00000040310, Alx4, aristaless-like homeobox 4, [Score=100, Expect=9e-23]; ENSMUSG00000014603, Alx3, aristaless-like homeobox 3, [Score=99.0, Expect=2e-22]} {Dmel: FBgn0052532, CG32532, [RH, Score=188, Expect=3e-55]} {Celegans: WBGene00006778, unc-42, [RH, Score=152, Expect=1e-42]} {Smed: dd_Smed_v6_21801_0_1, dd_Smed_v6_21801_0_1, [RH, Score=211, Expect=9e-63]} {RNA1310_35015.1} {RNA815_23154}

Mlig455_062688 {REF} {Length: 2531} {Pfam: Homeodomain [PF00046.31, score=77.5]} {Human: ENSG00000274382, PROP1, PROP paired-like homeobox 1, [RH, Score=99.0, Expect=1e-23]; ENSG00000175325, PROP1, PROP paired-like homeobox 1, [RH, Score=99.0, Expect=1e-23]} {Mouse: ENSMUSG00000036602, Alx1, ALX homeobox 1, [Score=103, Expect=5e-25]; ENSMUSG00000028736, Pax7, paired box 7, [Score=103, Expect=5e-24]; ENSMUSG00000024518, Rax, retina and anterior neural fold homeobox, [Score=102, Expect=4e-24]; ENSMUSG00000040310, Alx4, aristaless-like homeobox 4, [Score=102, Expect=8e-24]; ENSMUSG00000035277, Arx, aristaless related homeobox, [Score=101, Expect=4e-23]; ENSMUSG00000014603, Alx3, aristaless-like homeobox 3, [Score=100, Expect=2e-23]; ENSMUSG00000004872, Pax3, paired box 3, [Score=99.4, Expect=2e-22]; ENSMUSG00000012520, Phox2b, paired-like homeobox 2b, [Score=98.2, Expect=7e-23]} {Dmel: FBgn0052532, CG32532, [RH, Score=189, Expect=2e-56]} {Celegans: WBGene00006778, unc-42, [RH, Score=155, Expect=1e-44]} {Smed: dd_Smed_v6_21801_0_1, dd_Smed_v6_21801_0_1, [RH, Score=212, Expect=2e-64]} {RNA1310_35015.1} {RNA815_23154}
12. MligTC455_29344 358 7.46 Mlig455_037677, Mlig455_060573

Neo: -

Age: Up-Down-Down

 0.959 - - 0.959 - - -

Mlig455_037677 {REF} {Length: 5739} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=58.8]} {Smed: dd_Smed_v6_13734_0_18, dd_Smed_v6_13734_0_18, [Score=48.9, Expect=1e-07]} {RNA1509_13072} {RNA1310_3487} {RNA815_17419}

Mlig455_060573 {REF} {Length: 2073} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=27.1]; Endonuclease-reverse transcriptase [PF14529.8, score=24.7]} {RNA1509_13072} {RNA1310_3487} {RNA815_20795}
13. MligTC455_41723 46 0.97 Mlig455_001714

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_001714 {REF} {Length: 1881} {RNA1310_22665} {RNA815_13308}
14. MligTC455_30118 613 12.77 Mlig455_015882, Mlig455_070728

Neo: -

Age: logFC(26M/2M)=-0.325

 0.957 - - - - 0.957 -

Mlig455_015882 {REF} {Length: 1639} {TRANSSPLICED} {RNA1509_9107} {RNA1310_13804} {RNA815_857.1}

Mlig455_070728 {REF} {Length: 2202} {TRANSSPLICED} {RNA1509_9107} {RNA1310_39363} {RNA815_857.1}
15. MligTC455_14100 83 1.73 Mlig455_007430, Mlig455_023908, Mlig455_046498

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_007430 {REF} {Length: 1175} {NoTransDecoderORF} {RNA1310_41300}

Mlig455_023908 {REF} {Length: 1180} {NoTransDecoderORF} {RNA1310_41300}

Mlig455_046498 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1310_41300}
16. MligTC455_52939 40 0.84 Mlig455_010311

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_010311 {REF} {Length: 1147} {Pfam: Domain of unknown function (DUF4271) [PF14093.8, score=18.9]} {RNA1310_110667}

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