TomoSeq data search

Data search

Results for MligTC455_28407

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28407

192

4.01

Mlig455_048023

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.559

Mlig455_048023 {REF} {Length: 2789} {RNA1310_49064}

Cumulative graph for MligTC455_28407

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.515	2.599	0.68711	1.00000
RegionR2	1.134	2.599	0.22443	0.59468
RegionR3	1.526	2.599	0.05385	0.40647
RegionR4	1.124	2.599	0.22680	0.51908
RegionR5	1.074	2.599	0.18013	0.45674
RegionR6	0.493	2.599	0.52894	1.00000
RegionR7	0.428	2.599	0.60514	1.00000
RegionR8	-6.294	2.599	0.01838	0.26301

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.91	2.599	0.25511	0.96756
RegenerationR2	-0.69	2.599	0.33458	0.77038
RegenerationR3	-1.579	2.599	0.04140	0.35679
RegenerationR4	-0.952	2.599	0.24665	0.69467
RegenerationR5	-0.544	2.599	0.45814	0.83507
RegenerationR6	0.075	2.599	0.93487	1.00000
RegenerationBL	-0.369	2.599	0.86329	1.00000
RegenerationTP	3.815	2.599	0.01909	0.23690

Genes with expression patterns similar to MligTC455_28407

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28407	192	4.01	Mlig455_048023	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.559		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048023 {REF} {Length: 2789} {RNA1310_49064}
2.	MligTC455_40268	162	3.38	Mlig455_030335	Neo: - Age: Down-Up-Up	PRKAR1B	1.681	-	0.710	-	-	0.971	-	Mlig455_030335 {REF} {Length: 2002} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=87.6]} {Human: ENSG00000188191, PRKAR1B, protein kinase cAMP-dependent type I regulatory subunit beta, [Score=50.8, Expect=2e-06]; ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=48.9, Expect=8e-06]} {Mouse: ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=48.1, Expect=1e-05]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=54.7, Expect=6e-08]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=110, Expect=5e-26]} {RNA1509_58940} {RNA1310_17699, RNA1509_58940} {RNA1509_58940, RNA815_19132}
3.	MligTC455_12818	13	0.28	Mlig455_055956	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_055956 {REF} {Length: 851} {NoTransDecoderORF}
4.	MligTC455_42324	673	14.02	Mlig455_056179, Mlig455_056186	Neo: - Age: Down-Down-Up		0.96	-	-	-	-	0.960	-	Mlig455_056179 {REF} {Length: 1288} {RNA1509_43486} {RNA1310_37291.2} {RNA815_18345} Mlig455_056186 {REF} {Length: 979} {RNA1509_43486} {RNA1310_37291.1, RNA1509_43486} {RNA1509_43486, RNA815_18345}
5.	MligTC455_53188	211	4.39	Mlig455_029600	Neo: - Age: Down-Up-Up		0.96	-	-	-	-	0.960	-	Mlig455_029600 {REF} {Length: 1979} {Pfam: Globin [PF00042.24, score=38.2]} {RNA1509_38771} {RNA1310_34513} {RNA815_16338}
6.	MligTC455_45580	42	0.88	Mlig455_010918	Neo: - Age: Down-Down-Down		0.959	-	-	-	-	0.959	-	Mlig455_010918 {REF} {Length: 2621} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=86.4]; Anti-sigma-K factor rskA [PF10099.11, score=25.8]} {Smed: dd_Smed_v6_16346_0_1, dd_Smed_v6_16346_0_1, [Score=78.6, Expect=5e-15]} {RNA1310_36429} {RNA815_37174}
7.	MligTC455_33288	692	14.41	Mlig455_061850	Neo: - Age: Down-Up-Up Region-specific R2: 4.145 Region-enriched R2: 4.075/0.00000		0.955	-	-	-	-	0.955	-	Mlig455_061850 {REF} {Length: 889} {RNA1509_48963} {RNA1310_87307} {RNA815_23468}
8.	MligTC455_33280	127	2.64	Mlig455_010523	Neo: - Age: Down-Up-Up		0.954	-	-	-	-	0.954	-	Mlig455_010523 {REF} {Length: 587} {RNA1509_48963} {RNA1310_65789} {RNA815_23468}
9.	MligTC455_19198	547	11.39	Mlig455_007049	Neo: Int S/G2/M Age: Up-Up-Down		0.952	-	-	-	0.952	-	-	Mlig455_007049 {REF} {Length: 2853} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42763} {RNA1310_19295.1, RNA1509_42763} {RNA1509_42763, RNA815_5050}
10.	MligTC455_48659	72	1.51	Mlig455_038733	Neo: - Age: -	BMP1	0.951	-	-	-	-	0.951	-	Mlig455_038733 {REF} {Length: 2559} {Pfam: CUB domain [PF00431.22, score=55.5]; CD20-like family [PF04103.17, score=19.6]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=73.6, Expect=7e-13]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=73.9, Expect=3e-13]} {Dmel: FBgn0004885, tok, tolkin, [Score=59.3, Expect=8e-09]} {Celegans: WBGene00003555, nas-39, Zinc metalloproteinase nas-39, [Score=59.3, Expect=6e-09]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=62.8, Expect=5e-10]} {RNA1509_45794} {RNA1310_15908} {RNA815_14641.1}
11.	MligTC455_16236	30	0.62	Mlig455_010759	Neo: - Age: -	HRH1	0.95	-	-	-	-	0.950	-	Mlig455_010759 {REF} {Length: 2245} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=249.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=58.5]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=36.8]; Olfactory receptor [PF13853.8, score=24.6]; Serpentine type 7TM GPCR chemoreceptor Srbc [PF10316.11, score=20.4]; Protein of unknown function (DUF4022) [PF13214.8, score=19.6]} {Human: ENSG00000196639, HRH1, histamine receptor H1, [Score=179, Expect=3e-49]; ENSG00000149295, DRD2, dopamine receptor D2, [Score=172, Expect=1e-46]} {Mouse: ENSMUSG00000032259, Drd2, dopamine receptor D2, [Score=172, Expect=3e-47]; ENSMUSG00000053004, Hrh1, histamine receptor H1, [Score=171, Expect=3e-46]; ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=166, Expect=1e-43]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [RH, Score=252, Expect=4e-73]} {Celegans: WBGene00001053, dop-2, D2-like dopamine receptor long variant; DOPamine receptor, [RH, Score=173, Expect=6e-46]} {Smed: dd_Smed_v6_34803_0_1, dd_Smed_v6_34803_0_1, [RH, Score=241, Expect=1e-75]} {RNA1509_32954} {RNA1310_36460} {RNA815_785}

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