Data search
Results for MligTC455_42324
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42324 | 673 | 14.02 | Mlig455_056179, Mlig455_056186 | Neo: - Age: Down-Down-Up |
Mlig455_056179 {REF} {Length: 1288} {RNA1509_43486} {RNA1310_37291.2} {RNA815_18345} Mlig455_056186 {REF} {Length: 979} {RNA1509_43486} {RNA1310_37291.1, RNA1509_43486} {RNA1509_43486, RNA815_18345} |
Cumulative graph for MligTC455_42324
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.665 | 4.04 | 0.55927 | 1.00000 | |
| RegionR2 | 1.342 | 4.04 | 0.04979 | 0.26608 | |
| RegionR3 | 0.882 | 4.04 | 0.12211 | 0.60332 | |
| RegionR4 | 1.045 | 4.04 | 0.13849 | 0.37944 | |
| RegionR5 | -0.187 | 4.04 | 0.76811 | 1.00000 | |
| RegionR6 | -1.96 | 4.04 | 0.00767 | 0.14266 | |
| RegionR7 | -2.334 | 4.04 | 0.01144 | 0.18682 | |
| RegionR8 | 0.547 | 4.04 | 0.45084 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.118 | 4.04 | 0.02713 | 0.61088 | |
| RegenerationR2 | -1.26 | 4.04 | 0.08997 | 0.47978 | |
| RegenerationR3 | -1.073 | 4.04 | 0.15948 | 0.59202 | |
| RegenerationR4 | -0.723 | 4.04 | 0.36953 | 0.79373 | |
| RegenerationR5 | -0.516 | 4.04 | 0.50545 | 0.86138 | |
| RegenerationR6 | 0.528 | 4.04 | 0.53975 | 0.83283 | |
| RegenerationBL | -1.367 | 4.04 | 0.16538 | 0.48803 | |
| RegenerationTP | 0.619 | 4.04 | 0.47013 | 0.88057 |
Genes with expression patterns similar to MligTC455_42324
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42324 | 673 | 14.02 | Mlig455_056179, Mlig455_056186 | Neo: - Age: Down-Down-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056179 {REF} {Length: 1288} {RNA1509_43486} {RNA1310_37291.2} {RNA815_18345} Mlig455_056186 {REF} {Length: 979} {RNA1509_43486} {RNA1310_37291.1, RNA1509_43486} {RNA1509_43486, RNA815_18345} |
|
| 2. | MligTC455_48523 | 615 | 12.81 | Mlig455_027573 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.661 Region-enriched R2: 5.785/0.00008 |
2.717 | 0.862 | - | 0.905 | - | 0.950 | - | Mlig455_027573 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: N-formylglutamate amidohydrolase [PF05013.14, score=30.2]} {RNA1509_25119, RNA1509_35691, RNA1509_59740} {RNA1310_12591, RNA1509_25119, RNA1509_35691, RNA1509_59740} {RNA1509_25119, RNA1509_35691, RNA1509_59740, RNA815_14574} | |
| 3. | MligTC455_51261 | 88 | 1.84 | Mlig455_036952 | Neo: - Age: Down-Down-Down |
1.72 | - | - | 0.976 | 0.744 | - | - | Mlig455_036952 {REF} {Length: 3945} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=92.5]; Domain of unknown function (DUF4615) [PF15393.8, score=57.4]} {Mouse: ENSMUSG00000063236, 1110038F14Rik, RIKEN cDNA 1110038F14 gene, [RH, Score=55.1, Expect=4e-08]} {Dmel: FBgn0038673, CG14286, [RH, Score=53.9, Expect=5e-08]} {Smed: dd_Smed_v6_10522_0_1, dd_Smed_v6_10522_0_1, [Score=63.2, Expect=3e-10]} {RNA1509_16748} {RNA1310_30400} {RNA815_28361} | |
| 4. | MligTC455_29106 | 442 | 9.2 | Mlig455_064655 | Neo: - Age: Up-Down-Down Region-specific R7: 3.413 Region-enriched R7: 3.335/0.00000 Regeneration-downregulated BL: -6.699 Regeneration-depleted BL: -6.699 |
FNDC3A | 0.968 | - | - | - | - | 0.968 | - | Mlig455_064655 {REF} {Length: 4196} {Pfam: Fibronectin type III domain [PF00041.23, score=113.8]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=40.4]; SusE outer membrane protein [PF14292.8, score=22.6]; Fibronectin-III type domain [PF16794.7, score=18.7]} {Human: ENSG00000102531, FNDC3A, fibronectin type III domain containing 3A, [Score=154, Expect=4e-40]; ENSG00000075420, FNDC3B, fibronectin type III domain containing 3B, [Score=147, Expect=5e-38]} {Mouse: ENSMUSG00000033487, Fndc3a, fibronectin type III domain containing 3A, [Score=151, Expect=2e-39]} {Dmel: FBgn0259735, CG42389, [Score=99.8, Expect=4e-22]} {Celegans: WBGene00006776, unc-40, Unc-40 protein, [Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_4612_0_2, dd_Smed_v6_4612_0_2, [Score=140, Expect=8e-36]} {RNA1509_7286} {RNA1310_921.1} {RNA815_21055} |
| 5. | MligTC455_51400 | 220 | 4.58 | Mlig455_030378 | Neo: - Age: - |
KCNT1 | 0.968 | - | - | - | - | 0.968 | - | Mlig455_030378 {REF} {Length: 4793} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=91.7]; Ion channel [PF07885.18, score=43.4]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [RH, Score=1127, Expect=0.0]; ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [RH, Score=1107, Expect=0.0]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [RH, Score=1106, Expect=0.0]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [RH, Score=1102, Expect=0.0]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [RH, Score=821, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [RH, Score=846, Expect=0.0]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [RH, Score=1355, Expect=0.0]} {RNA1509_10851} {RNA1310_11341} {RNA815_3987} |
| 6. | MligTC455_28407 | 192 | 4.01 | Mlig455_048023 | Neo: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_048023 {REF} {Length: 2789} {RNA1310_49064} | |
| 7. | MligTC455_11863 | 67 | 1.4 | Mlig455_037840 | Neo: - Age: - Region-enriched R7: 3.761/0.04261 |
GRM3 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_037840 {REF} {Length: 3733} {Pfam: Receptor family ligand binding region [PF01094.30, score=244.3]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=189.6]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=36.4]} {Human: ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [RH, Score=701, Expect=0.0]} {Mouse: ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [RH, Score=699, Expect=0.0]} {Dmel: FBgn0019985, mGluR, metabotropic Glutamate Receptor, [RH, Score=766, Expect=0.0]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [RH, Score=626, Expect=0.0]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [RH, Score=818, Expect=0.0]} {RNA1310_32870} {RNA815_40865} |
| 8. | MligTC455_43747 | 186 | 3.88 | Mlig455_019998 | Neo: - Age: - Region-enriched R2: 3.849/0.00050 |
GLRA3 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_019998 {REF} {Length: 2977} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=148.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=117.6]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [RH, Score=337, Expect=2e-111]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [RH, Score=332, Expect=1e-109]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [RH, Score=338, Expect=1e-111]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [RH, Score=330, Expect=5e-109]} {Dmel: FBgn0024963, GluClalpha, [RH, Score=292, Expect=2e-94]} {Celegans: WBGene00001586, ggr-1, Glycine receptor subunit beta-type 4, [RH, Score=260, Expect=1e-81]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=254, Expect=4e-80]} {RNA1509_22140} {RNA1310_19557.2} {RNA815_6481} |
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