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Results for MligTC455_28486

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28486 27 0.57 Mlig455_057727, Mlig455_068888

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.735

Mlig455_057727 {REF} {Length: 1279} {RNA1310_28438.1} {RNA815_814}

Mlig455_068888 {REF} {Length: 4883} {Pfam: Glutaredoxin [PF00462.26, score=26.8]} {RNA1509_19898} {RNA1310_10140.2} {RNA815_1231}

Cumulative graph for MligTC455_28486

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.8 1.044 1.00000 1.00000
RegionR2 1.223 1.044 0.46416 0.85086
RegionR3 -1.337 1.044 0.99968 1.00000
RegionR4 0.094 1.044 0.77633 1.00000
RegionR5 1.035 1.044 0.35807 0.70947
RegionR6 -0.43 1.044 0.81107 1.00000
RegionR7 2.46 1.044 0.14041 0.70091
RegionR8 -1.245 1.044 0.99971 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.775 1.044 0.99998 1.00000
RegenerationR2 0.842 1.044 0.39945 0.81434
RegenerationR3 2.622 1.044 0.13349 0.55700
RegenerationR4 1.948 1.044 0.20400 0.65027
RegenerationR5 1.09 1.044 0.42828 0.81679
RegenerationR6 -0.646 1.044 0.83133 0.99165
RegenerationBL -0.7 1.044 0.92811 1.00000
RegenerationTP -2.639 1.044 0.99970 1.00000


Genes with expression patterns similar to MligTC455_28486

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28486 27 0.57 Mlig455_057727, Mlig455_068888

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.735

4 - - 1.000 1.000 1.000 1.000

Mlig455_057727 {REF} {Length: 1279} {RNA1310_28438.1} {RNA815_814}

Mlig455_068888 {REF} {Length: 4883} {Pfam: Glutaredoxin [PF00462.26, score=26.8]} {RNA1509_19898} {RNA1310_10140.2} {RNA815_1231}
2. MligTC455_06521 34 0.7 Mlig455_004743

Neo: -

Age: -

0.974 - - - - 0.974 - Mlig455_004743 {REF} {Length: 2830} {NoTransDecoderORF} {RNA1509_54874} {RNA1310_59242} {RNA815_47099}
3. MligTC455_17987 83 1.74 Mlig455_055688

Neo: -

Age: -

KCNQ2 0.972 - - - - 0.972 - Mlig455_055688 {REF} {Length: 3961} {Pfam: Ion channel [PF07885.18, score=54.0]; Ligand-gated ion channel [PF00060.28, score=36.1]; Ion transport protein [PF00520.33, score=27.3]} {Human: ENSG00000075043, KCNQ2, potassium voltage-gated channel subfamily Q member 2, [Score=51.6, Expect=2e-06]; ENSG00000162975, KCNF1, potassium voltage-gated channel modifier subfamily F member 1, [Score=51.2, Expect=2e-06]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=51.2, Expect=3e-06]; ENSG00000281151, KCNQ2, potassium voltage-gated channel subfamily Q member 2, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000051726, Kcnf1, potassium voltage-gated channel, subfamily F, member 1, [Score=51.6, Expect=1e-06]; ENSMUSG00000016346, Kcnq2, potassium voltage-gated channel, subfamily Q, member 2, [Score=51.2, Expect=2e-06]; ENSMUSG00000028033, Kcnq5, potassium voltage-gated channel, subfamily Q, member 5, [Score=51.2, Expect=2e-06]; ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=50.1, Expect=4e-06]} {Celegans: WBGene00003775, nmr-2, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-2, [Score=56.2, Expect=3e-08]} {Smed: dd_Smed_v6_19025_0_1, dd_Smed_v6_19025_0_1, [Score=46.2, Expect=3e-06]} {RNA1509_39194} {RNA1310_38701} {RNA815_27652}
4. MligTC455_40728 173 3.6 Mlig455_034319

Neo: -

Age: Up-Down-Down

BBS5 0.97 - - - - 0.970 - Mlig455_034319 {REF} {Length: 2733} {Pfam: Bardet-Biedl syndrome 5 protein [PF07289.13, score=445.8]; Vacuolar protein sorting protein 36 Vps36 [PF11605.10, score=22.5]} {Human: ENSG00000163093, BBS5, Bardet-Biedl syndrome 5, [Score=420, Expect=3e-146]} {Mouse: ENSMUSG00000063145, Bbs5, Bardet-Biedl syndrome 5 (human), [Score=427, Expect=5e-149]} {Dmel: FBgn0037280, CG1126, [Score=291, Expect=4e-95]} {Celegans: WBGene00010974, bbs-5, Bardet-Biedl syndrome 5 protein homolog, [Score=290, Expect=5e-95]} {Smed: dd_Smed_v6_8523_0_1, dd_Smed_v6_8523_0_1, [Score=409, Expect=3e-142]} {RNA1509_25092} {RNA1310_12052} {RNA815_9361.1}
5. MligTC455_08763 20 0.41 Mlig455_061186

Neo: -

Age: -

0.968 - - - - 0.968 - Mlig455_061186 {REF} {Length: 1077} {Smed: dd_Smed_v6_13791_0_1, dd_Smed_v6_13791_0_1, [Score=96.3, Expect=3e-24]} {RNA1310_122132}
6. MligTC455_37106 54 1.13 Mlig455_057730

Neo: -

Age: -

0.967 - - - - 0.967 - Mlig455_057730 {REF} {Length: 2467} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_34323} {RNA815_33771.1}
7. MligTC455_29745 26 0.54 Mlig455_030176

Neo: -

Age: logFC(26M/2M)=1.424

URGCP 0.966 - - - - 0.966 - Mlig455_030176 {REF} {Length: 6051} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=27.8]; Dynamin family [PF00350.25, score=19.4]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=130, Expect=1e-29]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=524, Expect=1e-152]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=523, Expect=1e-152]} {RNA1509_1879} {RNA1310_768} {RNA815_1275.1}
8. MligTC455_12553 207 4.31 Mlig455_039172

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.629

0.965 - - - - 0.965 - Mlig455_039172 {REF} {Length: 1710} {Pfam: WSC domain [PF01822.21, score=101.1]; F5/8 type C domain [PF00754.27, score=57.4]; Clip-domain serine protease homolog Scarface [PF18399.3, score=25.3]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_2342_0_1, dd_Smed_v6_2342_0_1, [Score=58.2, Expect=3e-09]} {RNA1509_17809} {RNA1310_28139} {RNA815_13563}
9. MligTC455_38089 94 1.97 Mlig455_008248

Neo: -

Age: Up-Down-Down

STIP1 0.963 - - - - 0.963 - Mlig455_008248 {REF} {Length: 4266} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=110.8]; Tetratricopeptide repeat [PF07719.19, score=59.5]; Tetratricopeptide repeat [PF00515.30, score=48.0]; Tetratricopeptide repeat [PF13181.8, score=41.5]; MYND finger [PF01753.20, score=36.4]; TPR repeat [PF13414.8, score=24.6]; Tetratricopeptide repeat [PF13424.8, score=24.4]; Tetratricopeptide repeat [PF13428.8, score=21.0]} {Human: ENSG00000168439, STIP1, stress induced phosphoprotein 1, [Score=71.2, Expect=4e-12]; ENSG00000197860, SGTB, small glutamine rich tetratricopeptide repeat containing beta, [Score=68.2, Expect=1e-11]} {Mouse: ENSMUSG00000024966, Stip1, stress-induced phosphoprotein 1, [Score=71.2, Expect=3e-12]; ENSMUSG00000042743, Sgtb, small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta, [Score=69.3, Expect=4e-12]} {Dmel: FBgn0028475, Hrd3, HMG-coA reductase degradation 3, [Score=64.7, Expect=4e-10]} {Celegans: WBGene00019983, sti-1, Stress-induced-phosphoprotein 1, [Score=59.3, Expect=4e-09]} {Smed: dd_Smed_v6_9973_0_1, dd_Smed_v6_9973_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_29016, RNA1509_46468} {RNA1310_3674.1, RNA1509_29016, RNA1509_46468} {RNA1509_29016, RNA1509_46468, RNA815_1729.1}
10. MligTC455_37708 135 2.81 Mlig455_008316

Neo: -

Age: Down-Up-Down

0.961 - - - - 0.961 - Mlig455_008316 {REF} {Length: 3405} {Pfam: NHL repeat [PF01436.23, score=45.8]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=52.4, Expect=2e-06]} {Dmel: FBgn0265356, tn, thin, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.5, Expect=1e-05]} {Smed: dd_Smed_v6_14782_0_1, dd_Smed_v6_14782_0_1, [Score=47.8, Expect=1e-05]} {RNA1509_45609} {RNA1310_24165, RNA1509_45609} {RNA1509_45609, RNA815_29204.1}
11. MligTC455_35448 23 0.48 Mlig455_051847

Neo: -

Age: logFC(26M/2M)=-0.338

BIRC6 0.959 - - - - 0.959 - Mlig455_051847 {REF} {Length: 15566} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=101.2]; Inhibitor of Apoptosis domain [PF00653.23, score=67.1]; Baculoviral IAP repeat-containing protein 6 [PF12356.10, score=35.7]; UEV domain [PF05743.15, score=23.4]} {Human: ENSG00000115760, BIRC6, baculoviral IAP repeat containing 6, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000024073, Birc6, baculoviral IAP repeat-containing 6, [RH, Score=665, Expect=0.0]} {Dmel: FBgn0266717, Bruce, BIR repeat containing ubiquitin-conjugating enzyme, [RH, Score=590, Expect=3e-168]} {Celegans: WBGene00006712, ubc-17, Probable ubiquitin-conjugating enzyme protein 17, [Score=299, Expect=9e-86]} {Smed: dd_Smed_v6_8315_0_1, dd_Smed_v6_8315_0_1, [RH, Score=493, Expect=1e-149]} {RNA1509_2928} {RNA1310_191.1} {RNA815_2029}
12. MligTC455_38178 19 0.39 Mlig455_025460

Neo: -

Age: -

SIX4 0.959 - - - - 0.959 - Mlig455_025460 {REF} {Length: 2329} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=141.7]; Homeodomain [PF00046.31, score=57.9]; Homeobox KN domain [PF05920.13, score=40.9]} {Human: ENSG00000100625, SIX4, SIX homeobox 4, [RH, Score=271, Expect=6e-84]} {Mouse: ENSMUSG00000034460, Six4, sine oculis-related homeobox 4, [RH, Score=270, Expect=1e-83]} {Dmel: FBgn0027364, Six4, [RH, Score=254, Expect=2e-81]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [Score=202, Expect=3e-63]} {Smed: dd_Smed_v6_37930_0_1, dd_Smed_v6_37930_0_1, [RH, Score=244, Expect=7e-79]}
13. MligTC455_45564 117 2.43 Mlig455_006872

Neo: -

Age: logFC(26M/2M)=-2.025

Region-enriched R6: 3.967/0.00318

ARF3 0.959 - - - - 0.959 - Mlig455_006872 {REF} {Length: 1935} {Pfam: ADP-ribosylation factor family [PF00025.23, score=210.6]; Ras family [PF00071.24, score=57.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=32.9]; G-protein alpha subunit [PF00503.22, score=32.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.2]} {Human: ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=214, Expect=3e-71]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=213, Expect=1e-70]; ENSG00000004059, ARF5, ADP ribosylation factor 5, [Score=204, Expect=5e-67]} {Mouse: ENSMUSG00000051853, Arf3, ADP-ribosylation factor 3, [Score=214, Expect=2e-71]; ENSMUSG00000048076, Arf1, ADP-ribosylation factor 1, [Score=213, Expect=7e-71]; ENSMUSG00000062421, Arf2, ADP-ribosylation factor 2, [Score=213, Expect=5e-71]; ENSMUSG00000020440, Arf5, ADP-ribosylation factor 5, [Score=204, Expect=3e-67]} {Dmel: FBgn0010348, Arf79F, ADP ribosylation factor at 79F, [Score=216, Expect=2e-72]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=213, Expect=4e-71]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [RH, Score=227, Expect=1e-76]} {RNA1509_57358} {RNA1310_37939, RNA1509_57358} {RNA1509_57358, RNA815_20725}
14. MligTC455_08318 24 0.51 Mlig455_009766, Mlig455_054914

Neo: -

Age: -

0.958 - - - - 0.958 -

Mlig455_009766 {REF} {Length: 3397} {Pfam: Anti-sigma-K factor rskA [PF10099.11, score=19.7]} {RNA1310_31279} {RNA815_38598}

Mlig455_054914 {REF} {Length: 3745} {Pfam: Anti-sigma-K factor rskA [PF10099.11, score=18.9]} {RNA1310_31279} {RNA815_38598}
15. MligTC455_40502 75 1.57 Mlig455_011578

Neo: -

Age: Down-Up-Down

SPATA18 0.958 - - - - 0.958 - Mlig455_011578 {REF} {Length: 2873} {TRANSSPLICED} {Pfam: Mitochondria-eating protein [PF16026.7, score=153.7]} {Human: ENSG00000163071, SPATA18, spermatogenesis associated 18, [Score=179, Expect=2e-48]} {Mouse: ENSMUSG00000029155, Spata18, spermatogenesis associated 18, [Score=220, Expect=3e-63]} {Smed: dd_Smed_v6_6321_0_1, dd_Smed_v6_6321_0_1, [Score=344, Expect=3e-111]} {RNA1509_30652} {RNA1310_30604} {RNA815_17332}
16. MligTC455_12565 22 0.47 Mlig455_020053, Mlig455_022299

Neo: -

Age: Down-Up-Down

0.957 - - - - 0.957 -

Mlig455_020053 {REF} {Length: 495} {NoTransDecoderORF} {RNA1310_17193.1} {RNA815_6680}

Mlig455_022299 {REF} {Length: 540} {NoTransDecoderORF} {RNA1310_17193.1} {RNA815_6680}
17. MligTC455_28232 23 0.47 Mlig455_048762, Mlig455_059262

Neo: -

Age: -

0.957 - - - - 0.957 -

Mlig455_048762 {REF} {Length: 1714} {RNA1509_48610} {RNA1310_16690.2} {RNA815_20964.1}

Mlig455_059262 {REF} {Length: 4559} {TRANSSPLICED} {RNA1509_48610} {RNA1310_16690.1} {RNA815_20964.1}
18. MligTC455_02232 152 3.17 Mlig455_002887

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_002887 {REF} {Length: 1354} {Dmel: FBgn0035253, CG7971, [Score=47.8, Expect=6e-06]} {RNA1310_125762}
19. MligTC455_24569 17 0.35 Mlig455_039795

Neo: -

Age: -

CACNA2D2 0.954 - - - - 0.954 - Mlig455_039795 {REF} {Length: 4369} {Pfam: VWA N-terminal [PF08399.13, score=79.6]; Cache domain [PF02743.20, score=54.9]; von Willebrand factor type A domain [PF13519.8, score=37.5]; von Willebrand factor type A domain [PF00092.30, score=32.3]; von Willebrand factor type A domain [PF13768.8, score=27.8]} {Human: ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [Score=182, Expect=5e-46]; ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=176, Expect=3e-44]; ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=174, Expect=2e-43]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [Score=182, Expect=3e-46]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [Score=177, Expect=1e-44]; ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=176, Expect=3e-44]} {Dmel: FBgn0028863, CG4587, [Score=149, Expect=5e-36]} {Celegans: WBGene00007041, tag-180, [Score=110, Expect=4e-24]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [RH, Score=1452, Expect=0.0]} {RNA1509_28096} {RNA1310_2030} {RNA815_1872}
20. MligTC455_14740 48 1.01 Mlig455_010989

Neo: -

Age: -

LRRC74A 0.953 - - - - 0.953 - Mlig455_010989 {REF} {Length: 11280} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=103.2]; Leucine Rich Repeat [PF00560.35, score=29.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=28.4]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=157, Expect=2e-41]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=153, Expect=5e-40]} {Dmel: FBgn0033212, LRR, Leucine-rich repeat, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=75.5, Expect=5e-14]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=151, Expect=3e-39]} {RNA1509_2416} {RNA1310_17273} {RNA815_6564.1}
21. MligTC455_24306 173 3.6 Mlig455_040232

Neo: Irradiation

Age: -

CDK10 0.953 - - - - 0.953 - Mlig455_040232 {REF} {Length: 2273} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=220.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.2]} {Human: ENSG00000185324, CDK10, cyclin dependent kinase 10, [RH, Score=425, Expect=1e-148]} {Mouse: ENSMUSG00000033862, Cdk10, cyclin-dependent kinase 10, [RH, Score=427, Expect=2e-149]} {Dmel: FBgn0013435, Cdc2rk, Cdc2-related kinase, [RH, Score=377, Expect=8e-130]} {Celegans: WBGene00015203, cdk-11.1, Putative serine/threonine-protein kinase B0495.2, [Score=282, Expect=5e-89]} {Smed: dd_Smed_v6_3540_0_1, dd_Smed_v6_3540_0_1, [Score=336, Expect=5e-112]} {RNA1509_31945} {RNA1310_24707, RNA1509_31945} {RNA1509_31945, RNA815_10940}
22. MligTC455_16150 267 5.56 Mlig455_057692

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.781

KLHDC8A 0.952 - - - - 0.952 - Mlig455_057692 {REF} {Length: 1684} {Pfam: Kelch motif [PF13964.8, score=56.8]; Kelch motif [PF01344.27, score=52.7]; Kelch motif [PF07646.17, score=36.4]; Galactose oxidase, central domain [PF13418.8, score=35.1]; Kelch motif [PF13854.8, score=27.6]} {Human: ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=58.5, Expect=3e-09]} {Mouse: ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_14507_0_1, dd_Smed_v6_14507_0_1, [RH, Score=209, Expect=3e-63]} {RNA1509_58319, RNA1509_58644} {RNA1310_20213, RNA1509_58319, RNA1509_58644} {RNA1509_58319, RNA1509_58644, RNA815_8052}
23. MligTC455_31986 10 0.21 Mlig455_032542, Mlig455_037929

Neo: -

Age: -

MAP3K19 0.952 - - - - 0.952 -

Mlig455_032542 {REF} {Length: 2537} {Pfam: Protein kinase domain [PF00069.27, score=192.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=136.8]; Fungal protein kinase [PF17667.3, score=25.3]; Ankyrin repeats (many copies) [PF13637.8, score=22.3]; ABC1 atypical kinase-like domain [PF03109.18, score=21.1]; Kinase-like [PF14531.8, score=18.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=132, Expect=7e-32]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=129, Expect=6e-30]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=135, Expect=2e-33]} {Dmel: FBgn0024329, Mekk1, [Score=124, Expect=1e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_4849_0_2, dd_Smed_v6_4849_0_2, [Score=117, Expect=8e-27]} {RNA1509_20120} {RNA1310_1544} {RNA815_2146}

Mlig455_037929 {REF} {Length: 1598} {Pfam: Protein kinase domain [PF00069.27, score=32.1]; Ankyrin repeats (many copies) [PF13637.8, score=23.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=23.3]} {RNA1509_20120} {RNA1310_1544} {RNA815_39726}

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