TomoSeq data search

Data search

Results for MligTC455_28493

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28493	1910	39.79	Mlig455_022053, Mlig455_062896	Neo: - Age: - Regeneration-downregulated BL: -1.869 Regeneration-depleted BL: -1.869	B3GALT5	Mlig455_022053 {REF} {Length: 1893} {Pfam: Galactosyltransferase [PF01762.23, score=170.8]; Fringe-like [PF02434.18, score=23.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=4e-34]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [RH, Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [RH, Score=129, Expect=1e-33]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [RH, Score=127, Expect=3e-33]} {Dmel: FBgn0035558, CG11357, [RH, Score=154, Expect=4e-42]} {Celegans: WBGene00008478, E03H4.11, Hexosyltransferase, [RH, Score=89.0, Expect=3e-19]} {Smed: dd_Smed_v6_18077_0_1, dd_Smed_v6_18077_0_1, [RH, Score=174, Expect=1e-51]} {RNA1509_53037} {RNA1310_11280} {RNA815_5361.1} Mlig455_062896 {REF} {Length: 3619} {Pfam: Galactosyltransferase [PF01762.23, score=170.8]; Fringe-like [PF02434.18, score=23.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=4e-34]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [RH, Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [RH, Score=129, Expect=1e-33]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [RH, Score=127, Expect=3e-33]} {Dmel: FBgn0035558, CG11357, [RH, Score=154, Expect=4e-42]} {Celegans: WBGene00008478, E03H4.11, Hexosyltransferase, [RH, Score=89.0, Expect=3e-19]} {Smed: dd_Smed_v6_18077_0_1, dd_Smed_v6_18077_0_1, [RH, Score=174, Expect=1e-51]} {RNA1509_53037} {RNA1310_11280} {RNA815_5361.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28493

1910

39.79

Mlig455_022053, Mlig455_062896

Neo: -

Age: -

Regeneration-downregulated BL: -1.869

Regeneration-depleted BL: -1.869

B3GALT5

Mlig455_022053 {REF} {Length: 1893} {Pfam: Galactosyltransferase [PF01762.23, score=170.8]; Fringe-like [PF02434.18, score=23.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=4e-34]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [RH, Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [RH, Score=129, Expect=1e-33]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [RH, Score=127, Expect=3e-33]} {Dmel: FBgn0035558, CG11357, [RH, Score=154, Expect=4e-42]} {Celegans: WBGene00008478, E03H4.11, Hexosyltransferase, [RH, Score=89.0, Expect=3e-19]} {Smed: dd_Smed_v6_18077_0_1, dd_Smed_v6_18077_0_1, [RH, Score=174, Expect=1e-51]} {RNA1509_53037} {RNA1310_11280} {RNA815_5361.1}

Mlig455_062896 {REF} {Length: 3619} {Pfam: Galactosyltransferase [PF01762.23, score=170.8]; Fringe-like [PF02434.18, score=23.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=4e-34]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [RH, Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [RH, Score=129, Expect=1e-33]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [RH, Score=127, Expect=3e-33]} {Dmel: FBgn0035558, CG11357, [RH, Score=154, Expect=4e-42]} {Celegans: WBGene00008478, E03H4.11, Hexosyltransferase, [RH, Score=89.0, Expect=3e-19]} {Smed: dd_Smed_v6_18077_0_1, dd_Smed_v6_18077_0_1, [RH, Score=174, Expect=1e-51]} {RNA1509_53037} {RNA1310_11280} {RNA815_5361.1}

Cumulative graph for MligTC455_28493

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.614	5.461	0.36689	1.00000
RegionR2	0.435	5.461	0.28091	0.66766
RegionR3	-0.125	5.461	0.71681	1.00000
RegionR4	-0.666	5.461	0.09241	0.29158
RegionR5	-0.598	5.461	0.08144	0.26538
RegionR6	0.55	5.461	0.10057	0.58227
RegionR7	0.684	5.461	0.05621	0.45604
RegionR8	0.334	5.461	0.44126	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.167	5.461	0.85850	1.00000
RegenerationR2	-0.281	5.461	0.48875	0.86739
RegenerationR3	-0.327	5.461	0.46128	0.83839
RegenerationR4	-0.261	5.461	0.55444	0.89397
RegenerationR5	-0.35	5.461	0.43156	0.81902
RegenerationR6	-0.264	5.461	0.53029	0.82701
RegenerationBL	-1.869	5.461	0.00010	0.00467	Specific for BL: -1.869
RegenerationTP	0.148	5.461	0.73404	1.00000

Genes with expression patterns similar to MligTC455_28493

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28493	1910	39.79	Mlig455_022053, Mlig455_062896	Neo: - Age: - Regeneration-downregulated BL: -1.869 Regeneration-depleted BL: -1.869	B3GALT5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022053 {REF} {Length: 1893} {Pfam: Galactosyltransferase [PF01762.23, score=170.8]; Fringe-like [PF02434.18, score=23.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=4e-34]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [RH, Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [RH, Score=129, Expect=1e-33]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [RH, Score=127, Expect=3e-33]} {Dmel: FBgn0035558, CG11357, [RH, Score=154, Expect=4e-42]} {Celegans: WBGene00008478, E03H4.11, Hexosyltransferase, [RH, Score=89.0, Expect=3e-19]} {Smed: dd_Smed_v6_18077_0_1, dd_Smed_v6_18077_0_1, [RH, Score=174, Expect=1e-51]} {RNA1509_53037} {RNA1310_11280} {RNA815_5361.1} Mlig455_062896 {REF} {Length: 3619} {Pfam: Galactosyltransferase [PF01762.23, score=170.8]; Fringe-like [PF02434.18, score=23.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=4e-34]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [RH, Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [RH, Score=129, Expect=1e-33]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [RH, Score=127, Expect=3e-33]} {Dmel: FBgn0035558, CG11357, [RH, Score=154, Expect=4e-42]} {Celegans: WBGene00008478, E03H4.11, Hexosyltransferase, [RH, Score=89.0, Expect=3e-19]} {Smed: dd_Smed_v6_18077_0_1, dd_Smed_v6_18077_0_1, [RH, Score=174, Expect=1e-51]} {RNA1509_53037} {RNA1310_11280} {RNA815_5361.1}
2.	MligTC455_10415	49	1.03	Mlig455_020038	Neo: - Age: Down-Up-Down Region-enriched R4: 4.412/0.00839	MAP3K19	0.968	-	-	-	0.968	-	-	Mlig455_020038 {REF} {Length: 6555} {Pfam: Protein kinase domain [PF00069.27, score=167.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.8]; Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=68.5]; MAC/Perforin domain [PF01823.21, score=50.4]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=42.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=4e-29]} {Mouse: ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=111, Expect=2e-24]; ENSMUSG00000025758, Plk4, polo like kinase 4, [Score=108, Expect=5e-23]; ENSMUSG00000116326, Plk4, polo like kinase 4, [Score=108, Expect=5e-23]} {Dmel: FBgn0024329, Mekk1, [Score=127, Expect=7e-29]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=108, Expect=2e-23]} {Smed: dd_Smed_v6_4784_0_2, dd_Smed_v6_4784_0_2, [Score=108, Expect=6e-24]} {RNA1509_32401} {RNA1310_39112} {RNA815_35359}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_28493

1910

39.79

Mlig455_022053, Mlig455_062896

Neo: -

Age: -

Regeneration-downregulated BL: -1.869

Regeneration-depleted BL: -1.869

B3GALT5

1.000

MligTC455_10415

1.03

Mlig455_020038

Neo: -

Age: Down-Up-Down

Region-enriched R4: 4.412/0.00839

MAP3K19

0.968

Mlig455_020038 {REF} {Length: 6555} {Pfam: Protein kinase domain [PF00069.27, score=167.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.8]; Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=68.5]; MAC/Perforin domain [PF01823.21, score=50.4]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=42.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=4e-29]} {Mouse: ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=111, Expect=2e-24]; ENSMUSG00000025758, Plk4, polo like kinase 4, [Score=108, Expect=5e-23]; ENSMUSG00000116326, Plk4, polo like kinase 4, [Score=108, Expect=5e-23]} {Dmel: FBgn0024329, Mekk1, [Score=127, Expect=7e-29]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=108, Expect=2e-23]} {Smed: dd_Smed_v6_4784_0_2, dd_Smed_v6_4784_0_2, [Score=108, Expect=6e-24]} {RNA1509_32401} {RNA1310_39112} {RNA815_35359}