TomoSeq data search

Data search

Results for MligTC455_10415

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_10415

49

1.03

Mlig455_020038

Neo: -

Age: Down-Up-Down

Region-enriched R4: 4.412/0.00839

MAP3K19

Mlig455_020038 {REF} {Length: 6555} {Pfam: Protein kinase domain [PF00069.27, score=167.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.8]; Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=68.5]; MAC/Perforin domain [PF01823.21, score=50.4]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=42.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=4e-29]} {Mouse: ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=111, Expect=2e-24]; ENSMUSG00000025758, Plk4, polo like kinase 4, [Score=108, Expect=5e-23]; ENSMUSG00000116326, Plk4, polo like kinase 4, [Score=108, Expect=5e-23]} {Dmel: FBgn0024329, Mekk1, [Score=127, Expect=7e-29]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=108, Expect=2e-23]} {Smed: dd_Smed_v6_4784_0_2, dd_Smed_v6_4784_0_2, [Score=108, Expect=6e-24]} {RNA1509_32401} {RNA1310_39112} {RNA815_35359}

Cumulative graph for MligTC455_10415

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.213	1.421	0.99968	1.00000
RegionR2	0.12	1.421	0.74304	1.00000
RegionR3	1.035	1.421	0.38093	0.91277
RegionR4	4.412	1.421	0.00076	0.00839
RegionR5	0.639	1.421	0.56795	0.92686
RegionR6	0.528	1.421	0.61033	1.00000
RegionR7	0.383	1.421	0.69140	1.00000
RegionR8	-3.905	1.421	0.99952	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.263	1.421	1.00000	1.00000
RegenerationR2	-0.76	1.421	0.35087	0.78221
RegenerationR3	-0.975	1.421	0.29706	0.72866
RegenerationR4	-2.691	1.421	0.00605	0.11143
RegenerationR5	0.392	1.421	0.67747	0.94359
RegenerationR6	0.099	1.421	0.92592	1.00000
RegenerationBL	-2.948	1.421	0.99961	1.00000
RegenerationTP	1.949	1.421	0.38956	0.82240

Genes with expression patterns similar to MligTC455_10415

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10415	49	1.03	Mlig455_020038	Neo: - Age: Down-Up-Down Region-enriched R4: 4.412/0.00839	MAP3K19	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020038 {REF} {Length: 6555} {Pfam: Protein kinase domain [PF00069.27, score=167.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.8]; Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=68.5]; MAC/Perforin domain [PF01823.21, score=50.4]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=42.1]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=4e-29]} {Mouse: ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=111, Expect=2e-24]; ENSMUSG00000025758, Plk4, polo like kinase 4, [Score=108, Expect=5e-23]; ENSMUSG00000116326, Plk4, polo like kinase 4, [Score=108, Expect=5e-23]} {Dmel: FBgn0024329, Mekk1, [Score=127, Expect=7e-29]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=108, Expect=2e-23]} {Smed: dd_Smed_v6_4784_0_2, dd_Smed_v6_4784_0_2, [Score=108, Expect=6e-24]} {RNA1509_32401} {RNA1310_39112} {RNA815_35359}
2.	MligTC455_23828	57	1.18	Mlig455_026697	Neo: - Age: -		1.714	-	-	0.950	0.764	-	-	Mlig455_026697 {REF} {Length: 468} {NoTransDecoderORF}
3.	MligTC455_16234	28	0.58	Mlig455_014483	Neo: - Age: -		0.99	-	-	-	-	-	0.990	Mlig455_014483 {REF} {Length: 503} {NoTransDecoderORF} {RNA1509_8458}
4.	MligTC455_28493	1910	39.79	Mlig455_022053, Mlig455_062896	Neo: - Age: - Regeneration-downregulated BL: -1.869 Regeneration-depleted BL: -1.869	B3GALT5	0.968	-	-	-	0.968	-	-	Mlig455_022053 {REF} {Length: 1893} {Pfam: Galactosyltransferase [PF01762.23, score=170.8]; Fringe-like [PF02434.18, score=23.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=4e-34]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [RH, Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [RH, Score=129, Expect=1e-33]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [RH, Score=127, Expect=3e-33]} {Dmel: FBgn0035558, CG11357, [RH, Score=154, Expect=4e-42]} {Celegans: WBGene00008478, E03H4.11, Hexosyltransferase, [RH, Score=89.0, Expect=3e-19]} {Smed: dd_Smed_v6_18077_0_1, dd_Smed_v6_18077_0_1, [RH, Score=174, Expect=1e-51]} {RNA1509_53037} {RNA1310_11280} {RNA815_5361.1} Mlig455_062896 {REF} {Length: 3619} {Pfam: Galactosyltransferase [PF01762.23, score=170.8]; Fringe-like [PF02434.18, score=23.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=4e-34]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [RH, Score=129, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [RH, Score=129, Expect=1e-33]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [RH, Score=127, Expect=3e-33]} {Dmel: FBgn0035558, CG11357, [RH, Score=154, Expect=4e-42]} {Celegans: WBGene00008478, E03H4.11, Hexosyltransferase, [RH, Score=89.0, Expect=3e-19]} {Smed: dd_Smed_v6_18077_0_1, dd_Smed_v6_18077_0_1, [RH, Score=174, Expect=1e-51]} {RNA1509_53037} {RNA1310_11280} {RNA815_5361.1}
5.	MligTC455_30130	62	1.29	Mlig455_040669, Mlig455_068784, Mlig455_068802	Neo: Irradiation Age: Up-Down-Down		0.962	-	-	0.962	-	-	-	Mlig455_040669 {REF} {Length: 3166} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1} Mlig455_068784 {REF} {Length: 3176} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1, RNA1509_20007} {RNA1509_20007, RNA815_353.1} Mlig455_068802 {REF} {Length: 3206} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1}
6.	MligTC455_53628	724	15.09	Mlig455_060297	Neo: - Age: Down-Up-Up	ADGRA3	0.962	-	-	-	0.962	-	-	Mlig455_060297 {REF} {Length: 2032} {Pfam: Leucine rich repeat [PF13855.8, score=61.4]} {Human: ENSG00000152990, ADGRA3, adhesion G protein-coupled receptor A3, [Score=49.3, Expect=1e-05]; ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=50.8, Expect=2e-06]; ENSMUSG00000029090, Adgra3, adhesion G protein-coupled receptor A3, [Score=48.9, Expect=1e-05]; ENSMUSG00000044505, Lingo4, leucine rich repeat and Ig domain containing 4, [Score=48.5, Expect=1e-05]} {Dmel: FBgn0264089, sli, slit, [Score=53.5, Expect=2e-07]} {RNA1509_49012} {RNA1310_15910.1} {RNA815_6013}
7.	MligTC455_44012	76	1.58	Mlig455_059029	Neo: - Age: - Region-enriched R7: 3.283/0.01168		0.953	-	-	-	-	0.953	-	Mlig455_059029 {REF} {Length: 1652} {Smed: dd_Smed_v6_8849_0_1, dd_Smed_v6_8849_0_1, [Score=45.1, Expect=2e-06]} {RNA1310_38924}
8.	MligTC455_32912	187	3.89	Mlig455_022604	Neo: - Age: - Region-enriched R4: 2.525/0.00995		0.952	-	-	-	-	-	0.952	Mlig455_022604 {REF} {Length: 2711} {tRNA: Lys(CTT),pseudo, score=24.8} {Smed: dd_Smed_v6_8694_0_1, dd_Smed_v6_8694_0_1, [Score=47.0, Expect=9e-07]} {RNA1509_54756} {RNA1310_15352} {RNA815_19591}
9.	MligTC455_23975	87	1.82	Mlig455_004300, Mlig455_013677, Mlig455_035064, Mlig455_038062, Mlig455_041825, Mlig455_053049, Mlig455_065851, Mlig455_067880	Neo: Germline Age: - Region-enriched R4: 2.511/0.02468		0.951	-	-	0.951	-	-	-	Mlig455_004300 {REF} {Length: 605} {RNA1509_56714} {RNA1310_24363} {RNA815_4579} Mlig455_013677 {REF} {Length: 683} {RNA1509_56714} {RNA1310_23291.1} {RNA815_4579} Mlig455_035064 {REF} {Length: 1386} {RNA1509_39040} {RNA1310_24363} {RNA815_4579} Mlig455_038062 {REF} {Length: 204} {NoTransDecoderORF} {RNA1509_56714} {RNA1310_24363} {RNA815_4579} Mlig455_041825 {REF} {Length: 85} {NoTransDecoderORF} {RNA1509_56714} {RNA1310_24363} {RNA815_4579} Mlig455_053049 {REF} {Length: 466} {RNA1509_56714} {RNA1310_24363} {RNA815_4579} Mlig455_065851 {REF} {Length: 1227} {RNA1509_56714} {RNA1310_24363} {RNA815_4579} Mlig455_067880 {REF} {Length: 674} {RNA1509_56714} {RNA1310_23291.1} {RNA815_4579}
10.	MligTC455_51351	116	2.43	Mlig455_040920	Neo: Int S/G2/M Age: logFC(26M/2M)=0.585 Region-enriched R4: 3.203/0.00816	HIST4H4	0.95	-	-	0.950	-	-	-	Mlig455_040920 {REF} {Length: 1614} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_21430} {RNA1310_47788.1} {RNA815_23950.1}

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