TomoSeq data search

Data search

Results for MligTC455_28601

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28601	1147	23.89	Mlig455_013220	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.908	MYH7	Mlig455_013220 {REF} {Length: 9351} {Pfam: Myosin tail [PF01576.21, score=241.0]; Intermediate filament protein [PF00038.23, score=35.6]; Crescentin protein [PF19220.2, score=31.7]; Autophagy protein 16 (ATG16) [PF08614.13, score=21.7]; bZIP transcription factor [PF00170.23, score=19.2]; Transforming acidic coiled-coil-containing protein (TACC), C-terminal [PF05010.16, score=19.0]} {Human: ENSG00000092054, MYH7, myosin heavy chain 7, [Score=385, Expect=2e-113]; ENSG00000197616, MYH6, myosin heavy chain 6, [Score=382, Expect=4e-112]; ENSG00000109061, MYH1, myosin heavy chain 1, [Score=373, Expect=4e-109]; ENSG00000125414, MYH2, myosin heavy chain 2, [Score=369, Expect=6e-108]} {Mouse: ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [Score=390, Expect=3e-115]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [Score=384, Expect=6e-113]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [Score=371, Expect=9e-109]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [Score=390, Expect=3e-115]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [Score=345, Expect=3e-100]} {Smed: dd_Smed_v6_711_0_1, dd_Smed_v6_711_0_1, [RH, Score=840, Expect=0.0]} {RNA1509_43668} {RNA1310_3914, RNA1509_43668} {RNA1509_43668, RNA815_1258}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28601

1147

23.89

Mlig455_013220

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.908

MYH7

Mlig455_013220 {REF} {Length: 9351} {Pfam: Myosin tail [PF01576.21, score=241.0]; Intermediate filament protein [PF00038.23, score=35.6]; Crescentin protein [PF19220.2, score=31.7]; Autophagy protein 16 (ATG16) [PF08614.13, score=21.7]; bZIP transcription factor [PF00170.23, score=19.2]; Transforming acidic coiled-coil-containing protein (TACC), C-terminal [PF05010.16, score=19.0]} {Human: ENSG00000092054, MYH7, myosin heavy chain 7, [Score=385, Expect=2e-113]; ENSG00000197616, MYH6, myosin heavy chain 6, [Score=382, Expect=4e-112]; ENSG00000109061, MYH1, myosin heavy chain 1, [Score=373, Expect=4e-109]; ENSG00000125414, MYH2, myosin heavy chain 2, [Score=369, Expect=6e-108]} {Mouse: ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [Score=390, Expect=3e-115]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [Score=384, Expect=6e-113]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [Score=371, Expect=9e-109]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [Score=390, Expect=3e-115]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [Score=345, Expect=3e-100]} {Smed: dd_Smed_v6_711_0_1, dd_Smed_v6_711_0_1, [RH, Score=840, Expect=0.0]} {RNA1509_43668} {RNA1310_3914, RNA1509_43668} {RNA1509_43668, RNA815_1258}

Cumulative graph for MligTC455_28601

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.775	4.718	0.08261	0.62670
RegionR2	0	4.718	0.99875	1.00000
RegionR3	0.355	4.718	0.27567	0.82027
RegionR4	0.855	4.718	0.03684	0.15698
RegionR5	-0.564	4.718	0.11955	0.34558
RegionR6	0.334	4.718	0.32319	0.91233
RegionR7	0.441	4.718	0.25293	0.87956
RegionR8	0.353	4.718	0.43357	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.183	4.718	0.55338	1.00000
RegenerationR2	-0.327	4.718	0.35114	0.78249
RegenerationR3	-0.117	4.718	0.75648	0.96652
RegenerationR4	-0.546	4.718	0.17841	0.61810
RegenerationR5	-0.172	4.718	0.66580	0.93861
RegenerationR6	-0.316	4.718	0.41878	0.75004
RegenerationBL	-0.204	4.718	0.60876	0.95466
RegenerationTP	-0.735	4.718	0.09842	0.49004

Genes with expression patterns similar to MligTC455_28601

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28601	1147	23.89	Mlig455_013220	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.908	MYH7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013220 {REF} {Length: 9351} {Pfam: Myosin tail [PF01576.21, score=241.0]; Intermediate filament protein [PF00038.23, score=35.6]; Crescentin protein [PF19220.2, score=31.7]; Autophagy protein 16 (ATG16) [PF08614.13, score=21.7]; bZIP transcription factor [PF00170.23, score=19.2]; Transforming acidic coiled-coil-containing protein (TACC), C-terminal [PF05010.16, score=19.0]} {Human: ENSG00000092054, MYH7, myosin heavy chain 7, [Score=385, Expect=2e-113]; ENSG00000197616, MYH6, myosin heavy chain 6, [Score=382, Expect=4e-112]; ENSG00000109061, MYH1, myosin heavy chain 1, [Score=373, Expect=4e-109]; ENSG00000125414, MYH2, myosin heavy chain 2, [Score=369, Expect=6e-108]} {Mouse: ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [Score=390, Expect=3e-115]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [Score=384, Expect=6e-113]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [Score=371, Expect=9e-109]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [Score=390, Expect=3e-115]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [Score=345, Expect=3e-100]} {Smed: dd_Smed_v6_711_0_1, dd_Smed_v6_711_0_1, [RH, Score=840, Expect=0.0]} {RNA1509_43668} {RNA1310_3914, RNA1509_43668} {RNA1509_43668, RNA815_1258}
2.	MligTC455_28602	1118	23.3	Mlig455_013246	Neo: - Age: -		5.892	0.967	1.000	1.000	0.996	0.929	1.000	Mlig455_013246 {REF} {Length: 1088} {NoTransDecoderORF} {RNA1509_20106} {RNA1310_35871} {RNA815_24835}
3.	MligTC455_28603	1113	23.19	Mlig455_013315	Neo: - Age: -		5.888	0.967	1.000	1.000	0.990	0.931	1.000	Mlig455_013315 {REF} {Length: 840} {NoTransDecoderORF} {RNA1509_20106} {RNA1310_35871} {RNA815_24835}
4.	MligTC455_53734	59	1.23	Mlig455_055711	Neo: - Age: -		1.809	-	-	-	-	0.958	0.851	Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}
5.	MligTC455_00647	76	1.58	Mlig455_032515	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_032515 {REF} {Length: 35} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52118}
6.	MligTC455_35234	462	9.62	Mlig455_043529	Neo: - Age: Up-Down-Up	BIN1	0.956	-	-	-	-	-	0.956	Mlig455_043529 {REF} {Length: 2519} {Human: ENSG00000136717, BIN1, bridging integrator 1, [Score=49.7, Expect=6e-06]} {RNA1509_50698} {RNA1310_28892} {RNA815_23579}
7.	MligTC455_21351	238	4.96	Mlig455_066772	Neo: - Age: logFC(26M/2M)=0.262	PIR	0.952	-	-	-	-	-	0.952	Mlig455_066772 {REF} {Length: 1847} {TRANSSPLICED} {Pfam: Pirin [PF02678.18, score=114.0]; Pirin C-terminal cupin domain [PF05726.15, score=97.4]; Cupin domain [PF07883.13, score=27.7]} {Human: ENSG00000087842, PIR, pirin, [RH, Score=322, Expect=3e-110]} {Mouse: ENSMUSG00000031379, Pir, pirin, [RH, Score=314, Expect=3e-107]} {RNA1509_26991, RNA1509_45169, RNA1509_48470} {RNA1310_25739, RNA1509_26991, RNA1509_45169, RNA1509_48470} {RNA1509_26991, RNA1509_45169, RNA1509_48470, RNA815_15910}