M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_53734

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53734 59 1.23 Mlig455_055711

Neo: -

Age: -

 Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}

Cumulative graph for MligTC455_53734

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.212 1.45 0.99977 1.00000
RegionR2 -0.294 1.45 0.85150 1.00000
RegionR3 0.242 1.45 0.71020 1.00000
RegionR4 2.17 1.45 0.14666 0.39373
RegionR5 0.682 1.45 0.52776 0.89022
RegionR6 -1.042 1.45 0.94739 1.00000
RegionR7 1.279 1.45 0.45278 1.00000
RegionR8 -2.826 1.45 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.211 1.45 0.99985 1.00000
RegenerationR2 0.299 1.45 0.73729 0.96879
RegenerationR3 0.87 1.45 0.44787 0.83100
RegenerationR4 -0.297 1.45 0.75935 0.97252
RegenerationR5 0.312 1.45 0.75817 0.97482
RegenerationR6 2.346 1.45 0.05908 0.30510
RegenerationBL 2.342 1.45 0.18095 0.51020
RegenerationTP 1.951 1.45 0.39721 0.82716


Genes with expression patterns similar to MligTC455_53734

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53734 59 1.23 Mlig455_055711

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}
2. MligTC455_53733 70 1.46 Mlig455_042224

Neo: -

Age: -

 3.564 0.808 - 0.834 0.950 - 0.972 Mlig455_042224 {REF} {Length: 2282} {RNA1509_48475} {RNA1310_18466, RNA1509_48475} {RNA1509_48475, RNA815_22605}
3. MligTC455_25374 428 8.91 Mlig455_036389, Mlig455_036390, Mlig455_036391, Mlig455_054557

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.690

Regeneration-upregulated BL: 5.459

Regeneration-enriched BL: 5.459

 2.65 - - 0.788 0.974 - 0.888

Mlig455_036389 {REF} {Length: 860} {NoTransDecoderORF} {RNA1509_40044} {RNA1310_33232} {RNA815_16463}

Mlig455_036390 {REF} {Length: 5024} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_036391 {REF} {Length: 3445} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_054557 {REF} {Length: 6330} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}
4. MligTC455_28601 1147 23.89 Mlig455_013220

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.908

 MYH7 1.809 - - - - 0.958 0.851 Mlig455_013220 {REF} {Length: 9351} {Pfam: Myosin tail [PF01576.21, score=241.0]; Intermediate filament protein [PF00038.23, score=35.6]; Crescentin protein [PF19220.2, score=31.7]; Autophagy protein 16 (ATG16) [PF08614.13, score=21.7]; bZIP transcription factor [PF00170.23, score=19.2]; Transforming acidic coiled-coil-containing protein (TACC), C-terminal [PF05010.16, score=19.0]} {Human: ENSG00000092054, MYH7, myosin heavy chain 7, [Score=385, Expect=2e-113]; ENSG00000197616, MYH6, myosin heavy chain 6, [Score=382, Expect=4e-112]; ENSG00000109061, MYH1, myosin heavy chain 1, [Score=373, Expect=4e-109]; ENSG00000125414, MYH2, myosin heavy chain 2, [Score=369, Expect=6e-108]} {Mouse: ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [Score=390, Expect=3e-115]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [Score=384, Expect=6e-113]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [Score=371, Expect=9e-109]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [Score=390, Expect=3e-115]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [Score=345, Expect=3e-100]} {Smed: dd_Smed_v6_711_0_1, dd_Smed_v6_711_0_1, [RH, Score=840, Expect=0.0]} {RNA1509_43668} {RNA1310_3914, RNA1509_43668} {RNA1509_43668, RNA815_1258}
5. MligTC455_51795 223 4.65 Mlig455_025595, Mlig455_052898

Neo: -

Age: Down-Down-Up

 1.751 - - 0.959 - - 0.792

Mlig455_025595 {REF} {Length: 924} {TRANSSPLICED} {RNA1509_31318} {RNA1310_75729} {RNA815_39211}

Mlig455_052898 {REF} {Length: 984} {TRANSSPLICED} {RNA1509_31318} {RNA1310_75729} {RNA815_39211}
6. MligTC455_47004 371 7.72 Mlig455_007268

Neo: -

Age: Down-Up-Up

 OGFOD1 1.71 - - - 0.976 - 0.734 Mlig455_007268 {REF} {Length: 1419} {Pfam: Oxoglutarate and iron-dependent oxygenase degradation C-term [PF10637.11, score=46.5]} {Human: ENSG00000087263, OGFOD1, 2-oxoglutarate and iron dependent oxygenase domain containing 1, [Score=86.3, Expect=5e-19]} {Mouse: ENSMUSG00000033009, Ogfod1, 2-oxoglutarate and iron-dependent oxygenase domain containing 1, [Score=85.5, Expect=6e-19]} {RNA1509_32662, RNA1509_50798} {RNA1310_19206, RNA1509_32662, RNA1509_50798} {RNA1509_32662, RNA1509_50798, RNA815_18604}
7. MligTC455_13739 27 0.57 Mlig455_003060

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.158

 GLUL 1.705 - - - - 0.745 0.960 Mlig455_003060 {REF} {Length: 3073} {Pfam: Glutamine synthetase, beta-Grasp domain [PF03951.21, score=49.3]; Glutamine synthetase, catalytic domain [PF00120.26, score=46.0]} {Human: ENSG00000135821, GLUL, glutamate-ammonia ligase, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000026473, Glul, glutamate-ammonia ligase (glutamine synthetase), [RH, Score=522, Expect=0.0]} {Dmel: FBgn0001145, Gs2, Glutamine synthetase 2, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00001604, gln-3, Glutamine synthetase, [RH, Score=530, Expect=0.0]} {Smed: dd_Smed_v6_646_0_1, dd_Smed_v6_646_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_3029, RNA1509_54181, RNA1509_7928} {RNA1310_32301, RNA1509_3029, RNA1509_54181, RNA1509_7928}
8. MligTC455_27906 155 3.24 Mlig455_051966

Neo: Int S/G2/M

Age: Up-Down-Down

 KAT2B 1.677 - - - 0.966 - 0.711 Mlig455_051966 {REF} {Length: 3819} {TRANSSPLICED} {Pfam: PCAF (P300/CBP-associated factor) N-terminal domain [PF06466.13, score=161.2]; Bromodomain [PF00439.27, score=75.5]; Acetyltransferase (GNAT) family [PF00583.27, score=26.5]} {Human: ENSG00000114166, KAT2B, lysine acetyltransferase 2B, [RH, Score=422, Expect=5e-134]; ENSG00000108773, KAT2A, lysine acetyltransferase 2A, [RH, Score=410, Expect=1e-129]} {Mouse: ENSMUSG00000000708, Kat2b, K(lysine) acetyltransferase 2B, [Score=429, Expect=2e-137]} {Dmel: FBgn0020388, Gcn5, Gcn5 acetyltransferase, [RH, Score=263, Expect=1e-75]} {Celegans: WBGene00021636, pcaf-1, P300/CBP Associated Factor homolog, [RH, Score=229, Expect=1e-63]} {Smed: dd_Smed_v6_11453_0_1, dd_Smed_v6_11453_0_1, [RH, Score=429, Expect=2e-141]} {RNA1509_19153} {RNA1310_2061.1} {RNA815_10396.1}
9. MligTC455_27903 151 3.15 Mlig455_019807

Neo: -

Age: -

 KAT2A 1.673 - - - 0.958 - 0.715 Mlig455_019807 {REF} {Length: 4487} {Pfam: PCAF (P300/CBP-associated factor) N-terminal domain [PF06466.13, score=214.8]; Bromodomain [PF00439.27, score=75.8]; Acetyltransferase (GNAT) family [PF00583.27, score=26.5]} {Human: ENSG00000108773, KAT2A, lysine acetyltransferase 2A, [RH, Score=427, Expect=4e-135]} {Mouse: ENSMUSG00000000708, Kat2b, K(lysine) acetyltransferase 2B, [RH, Score=452, Expect=3e-145]} {Dmel: FBgn0020388, Gcn5, Gcn5 acetyltransferase, [RH, Score=263, Expect=5e-75]} {Celegans: WBGene00021636, pcaf-1, P300/CBP Associated Factor homolog, [RH, Score=229, Expect=3e-63]} {Smed: dd_Smed_v6_11453_0_1, dd_Smed_v6_11453_0_1, [RH, Score=422, Expect=6e-138]} {RNA1509_19153} {RNA1310_2061.1} {RNA815_10396.1}
10. MligTC455_36685 249 5.19 Mlig455_011304, Mlig455_022484, Mlig455_038580, Mlig455_053177, Mlig455_053195, Mlig455_054147, Mlig455_057048

Neo: -

Age: -

 0.981 - - - 0.981 - -

Mlig455_011304 {REF} {Length: 2066} {RNA1310_36097} {RNA815_32539}

Mlig455_022484 {REF} {Length: 1980} {RNA1310_36097} {RNA815_32539}

Mlig455_038580 {REF} {Length: 1727} {RNA1310_36097} {RNA815_32539}

Mlig455_053177 {REF} {Length: 1901} {RNA1310_36097} {RNA815_32539}

Mlig455_053195 {REF} {Length: 1903} {RNA1310_36097} {RNA815_32539}

Mlig455_054147 {REF} {Length: 709} {RNA1310_36097} {RNA815_32539}

Mlig455_057048 {REF} {Length: 2030} {RNA1310_36097} {RNA815_32539}
11. MligTC455_53859 28 0.59 Mlig455_056956

Neo: -

Age: -

 0.976 - - - 0.976 - - Mlig455_056956 {REF} {Length: 1452} {RNA1310_30892} {RNA815_30662}
12. MligTC455_25856 187 3.9 Mlig455_028662

Neo: -

Age: Up-Down-Up

 GLIPR2 0.972 - - - 0.972 - - Mlig455_028662 {REF} {Length: 794} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=32.1]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=44.7, Expect=1e-05]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=45.1, Expect=7e-06]} {Dmel: FBgn0051482, CG31482, [Score=50.8, Expect=8e-08]} {Smed: dd_Smed_v6_762_0_1, dd_Smed_v6_762_0_1, [Score=80.9, Expect=1e-18]} {RNA1509_26273} {RNA1310_33115} {RNA815_15217.1}
13. MligTC455_43091 159 3.31 Mlig455_012706

Neo: -

Age: -

 SPAST 0.969 - - - 0.969 - - Mlig455_012706 {REF} {Length: 3310} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=127.2]; AAA+ lid domain [PF17862.3, score=38.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=25.4]; AAA domain [PF13401.8, score=21.8]; TIP49 P-loop domain [PF06068.15, score=20.7]; IstB-like ATP binding protein [PF01695.19, score=20.2]; Bacterial TniB protein [PF05621.13, score=18.6]} {Human: ENSG00000021574, SPAST, spastin, [RH, Score=343, Expect=4e-113]} {Mouse: ENSMUSG00000024068, Spast, spastin, [RH, Score=339, Expect=2e-110]} {Dmel: FBgn0039141, spas, spastin, [RH, Score=327, Expect=8e-105]} {Celegans: WBGene00016045, spas-1, Probable spastin homolog spas-1, [RH, Score=306, Expect=2e-99]} {Smed: dd_Smed_v6_7472_0_1, dd_Smed_v6_7472_0_1, [RH, Score=323, Expect=3e-105]} {RNA1509_31393, RNA1509_60086} {RNA1310_17702, RNA1509_31393, RNA1509_60086} {RNA1509_31393, RNA1509_60086, RNA815_24923}
14. MligTC455_19694 101 2.1 Mlig455_019126

Neo: -

Age: -

 HMCN1 0.968 - - - - - 0.968 Mlig455_019126 {REF} {Length: 1904} {Pfam: Immunoglobulin domain [PF13927.8, score=96.3]; Immunoglobulin I-set domain [PF07679.18, score=82.1]; Immunoglobulin V-set domain [PF07686.19, score=63.8]; Immunoglobulin domain [PF00047.27, score=57.8]; Immunoglobulin domain [PF13895.8, score=55.6]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=88.6, Expect=8e-18]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=92.0, Expect=5e-19]; ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=88.6, Expect=6e-18]} {Dmel: FBgn0000071, Ama, Amalgam, [RH, Score=111, Expect=7e-27]} {Celegans: WBGene00004372, rig-5, NeuRonal IGCAM, [RH, Score=98.2, Expect=6e-22]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=64.3, Expect=1e-10]} {RNA1310_49122} {RNA815_40619}
15. MligTC455_16231 113 2.36 Mlig455_011361

Neo: -

Age: logFC(26M/2M)=-1.629

 0.967 - - - 0.967 - - Mlig455_011361 {REF} {Length: 717} {TRANSSPLICED} {RNA1509_1634, RNA1509_44264} {RNA1310_62516, RNA1509_1634} {RNA1509_1634, RNA815_22723}
16. MligTC455_35641 204 4.26 Mlig455_063893

Neo: -

Age: -

Region-enriched R7: 2.222/0.00831

 WSCD2 0.965 - - - 0.965 - - Mlig455_063893 {REF} {Length: 4676} {Pfam: WSC domain [PF01822.21, score=494.1]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=58.9, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=1e-08]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=58.9, Expect=3e-08]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=57.4, Expect=5e-08]} {RNA1509_10855, RNA1509_32133} {RNA1310_564, RNA1509_32133} {RNA1509_32133, RNA815_597.1}
17. MligTC455_14243 58 1.22 Mlig455_057238

Neo: -

Age: -

 ETV7 0.964 - - - 0.964 - - Mlig455_057238 {REF} {Length: 1031} {Pfam: Ets-domain [PF00178.24, score=57.2]} {Human: ENSG00000010030, ETV7, ETS variant 7, [Score=60.5, Expect=1e-10]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=57.0, Expect=2e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=57.8, Expect=9e-10]} {RNA1310_20084.1} {RNA815_23782.1}
18. MligTC455_19218 249 5.18 Mlig455_034022

Neo: -

Age: -

 0.963 - - - 0.963 - - Mlig455_034022 {REF} {Length: 2371} {Pfam: EF-hand domain pair [PF13499.8, score=79.6]; EF-hand domain [PF13405.8, score=63.7]; EF-hand domain pair [PF13833.8, score=62.4]; EF hand [PF00036.34, score=57.3]; EF hand [PF13202.8, score=40.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.2]} {Dmel: FBgn0026144, CBP, sarcoplasmic calcium-binding protein, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_1010_0_1, dd_Smed_v6_1010_0_1, [RH, Score=412, Expect=2e-143]} {RNA1509_14509} {RNA1310_13479} {RNA815_4591.1}
19. MligTC455_12668 71 1.48 Mlig455_062981, Mlig455_062987

Neo: -

Age: -

 0.962 - - - 0.962 - -

Mlig455_062981 {REF} {Length: 1508} {RNA1509_39161} {RNA1310_17318} {RNA815_13240}

Mlig455_062987 {REF} {Length: 1610} {RNA1509_39161} {RNA1310_17318} {RNA815_13240}
20. MligTC455_19668 814 16.96 Mlig455_048937

Neo: -

Age: -

 METAP2 0.962 - - - 0.962 - - Mlig455_048937 {REF} {Length: 1513} {Pfam: Metallopeptidase family M24 [PF00557.26, score=142.2]} {Human: ENSG00000111142, METAP2, methionyl aminopeptidase 2, [Score=504, Expect=3e-179]} {Mouse: ENSMUSG00000036112, Metap2, methionine aminopeptidase 2, [Score=501, Expect=9e-178]} {Dmel: FBgn0283478, und, uninitiated, [Score=492, Expect=1e-174]} {Celegans: WBGene00003130, map-2, Methionine AminoPeptidase, [Score=486, Expect=2e-172]} {Smed: dd_Smed_v6_2809_0_1, dd_Smed_v6_2809_0_1, [Score=504, Expect=2e-180]} {RNA1509_6431} {RNA1310_15348} {RNA815_5667}
21. MligTC455_18973 78 1.63 Mlig455_019347

Neo: -

Age: Up-Down-Down

Region-enriched R4: 3.600/0.01920

 0.961 - - - 0.961 - - Mlig455_019347 {REF} {Length: 1563} {RNA1509_35598, RNA1509_58186} {RNA1310_23207.2, RNA1509_58186} {RNA1509_58186, RNA815_10106}
22. MligTC455_37945 128 2.66 Mlig455_050331

Neo: -

Age: Down-Up-Down

 0.96 - - 0.960 - - - Mlig455_050331 {REF} {Length: 4704} {TRANSSPLICED} {RNA1509_35022, RNA1509_59283} {RNA1310_6390.1, RNA1509_35022, RNA1509_59283} {RNA1509_35022, RNA1509_59283, RNA815_7453}
23. MligTC455_43540 65 1.36 Mlig455_063604

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_063604 {REF} {Length: 1048} {NoTransDecoderORF} {RNA1509_52081} {RNA1310_2648.1} {RNA815_12987}
24. MligTC455_16060 22 0.47 Mlig455_044243

Neo: -

Age: Down-Up-Down

 CFAP157 0.958 - - 0.958 - - - Mlig455_044243 {REF} {Length: 2694} {TRANSSPLICED} {Pfam: Siphovirus Gp157 [PF05565.13, score=20.7]; Protein of unknown function, DUF573 [PF04504.16, score=20.6]} {Human: ENSG00000160401, CFAP157, cilia and flagella associated protein 157, [Score=106, Expect=5e-24]} {Mouse: ENSMUSG00000038987, Cfap157, cilia and flagella associated protein 157, [Score=110, Expect=3e-25]} {Dmel: FBgn0036962, CG17122, [Score=67.8, Expect=1e-11]} {Smed: dd_Smed_v6_11523_0_1, dd_Smed_v6_11523_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_42697} {RNA1310_10711, RNA1509_42697} {RNA1509_42697, RNA815_24261}
25. MligTC455_32672 285 5.95 Mlig455_003822

Neo: -

Age: Down-Up-Down

 VTI1A 0.957 - - - 0.957 - - Mlig455_003822 {REF} {Length: 2285} {TRANSSPLICED} {Pfam: Vesicle transport v-SNARE protein N-terminus [PF05008.17, score=59.4]; Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=54.7]; Sec20 [PF03908.15, score=21.9]} {Human: ENSG00000151532, VTI1A, vesicle transport through interaction with t-SNAREs 1A, [RH, Score=173, Expect=1e-53]} {Mouse: ENSMUSG00000024983, Vti1a, vesicle transport through interaction with t-SNAREs 1A, [RH, Score=175, Expect=3e-54]} {Dmel: FBgn0260862, Vti1a, Vesicle transport through interaction with t-SNAREs 1a, [RH, Score=144, Expect=2e-42]} {Celegans: WBGene00013302, vti-1, VTI (Vesicle Transport through t-SNARE Interaction) homolog, [Score=113, Expect=1e-30]} {Smed: dd_Smed_v6_5094_0_1, dd_Smed_v6_5094_0_1, [RH, Score=155, Expect=3e-47]} {RNA1509_11936} {RNA1310_29540.1, RNA1509_11936} {RNA1509_11936, RNA815_14399}
26. MligTC455_39267 863 17.98 Mlig455_034556, Mlig455_041487

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.003/0.01804

Regeneration-upregulated R6: 1.720

Regeneration-enriched R6: 1.720

 0.957 - - - 0.957 - -

Mlig455_034556 {REF} {Length: 2555} {TRANSSPLICED} {Pfam: PPR repeat family [PF13041.8, score=39.5]; Pentatricopeptide repeat domain [PF13812.8, score=32.4]} {Dmel: FBgn0035591, CG4611, [RH, Score=62.0, Expect=1e-09]} {Smed: dd_Smed_v6_8676_0_1, dd_Smed_v6_8676_0_1, [RH, Score=78.6, Expect=4e-15]} {RNA1509_11091, RNA1509_17932} {RNA1310_4937.2, RNA1509_11091, RNA1509_17932} {RNA1509_11091, RNA1509_17932, RNA815_928}

Mlig455_041487 {REF} {Length: 2559} {TRANSSPLICED} {Pfam: PPR repeat family [PF13041.8, score=39.9]; Pentatricopeptide repeat domain [PF13812.8, score=33.7]} {Smed: dd_Smed_v6_8676_0_2, dd_Smed_v6_8676_0_2, [Score=75.5, Expect=2e-14]} {RNA1509_17932} {RNA1310_4937.1} {RNA815_928}
27. MligTC455_54150 45 0.93 Mlig455_040594

Neo: -

Age: -

 0.957 - - - 0.957 - - Mlig455_040594 {REF} {Length: 2865} {TRANSSPLICED} {RNA1310_34799.1} {RNA815_13806}
28. MligTC455_09310 104 2.18 Mlig455_013222

Neo: -

Age: -

 NCOR1 0.955 - - 0.955 - - - Mlig455_013222 {REF} {Length: 5322} {TRANSSPLICED} {Human: ENSG00000141027, NCOR1, nuclear receptor corepressor 1, [RH, Score=213, Expect=5e-55]; ENSG00000196498, NCOR2, nuclear receptor corepressor 2, [RH, Score=203, Expect=7e-52]} {Mouse: ENSMUSG00000018501, Ncor1, nuclear receptor co-repressor 1, [RH, Score=213, Expect=5e-55]} {Dmel: FBgn0265523, Smr, Smrter, [RH, Score=220, Expect=2e-57]} {Smed: dd_Smed_v6_7709_0_1, dd_Smed_v6_7709_0_1, [RH, Score=210, Expect=7e-55]} {RNA1509_5304} {RNA1310_3560} {RNA815_6348}
29. MligTC455_31534 428 8.92 Mlig455_057376, Mlig455_057399

Neo: -

Age: -

 0.955 - - - - - 0.955

Mlig455_057376 {REF} {Length: 3077} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=59.1]; GDP-mannose 4,6 dehydratase [PF16363.7, score=28.8]; RmlD substrate binding domain [PF04321.19, score=19.8]; NAD(P)H-binding [PF13460.8, score=18.6]} {RNA1509_55612} {RNA1310_5934} {RNA815_15007}

Mlig455_057399 {REF} {Length: 3189} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=59.1]; GDP-mannose 4,6 dehydratase [PF16363.7, score=28.8]; RmlD substrate binding domain [PF04321.19, score=19.8]; NAD(P)H-binding [PF13460.8, score=18.6]} {RNA1509_55612} {RNA1310_5934} {RNA815_15007}
30. MligTC455_34713 3644 75.91 Mlig455_012307, Mlig455_031867, Mlig455_031949

Neo: Neoblast, stringent

Age: -

 KPNB1 0.955 - - - 0.955 - -

Mlig455_012307 {REF} {Length: 183} {NoTransDecoderORF}

Mlig455_031867 {REF} {Length: 3866} {Pfam: HEAT-like repeat [PF13513.8, score=57.4]; HEAT repeat [PF02985.24, score=40.9]; Importin-beta N-terminal domain [PF03810.21, score=39.1]; HEAT repeats [PF13646.8, score=37.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=23.3]; Vacuolar 14 Fab1-binding region [PF12755.9, score=23.0]} {Human: ENSG00000108424, KPNB1, karyopherin subunit beta 1, [RH, Score=976, Expect=0.0]} {Mouse: ENSMUSG00000001440, Kpnb1, karyopherin (importin) beta 1, [RH, Score=972, Expect=0.0]} {Dmel: FBgn0262743, Fs(2)Ket, Female sterile (2) Ketel, [RH, Score=874, Expect=0.0]} {Celegans: WBGene00002075, imb-1, IMportin Beta family, [RH, Score=720, Expect=0.0]} {Smed: dd_Smed_v6_3466_0_1, dd_Smed_v6_3466_0_1, [RH, Score=863, Expect=0.0]} {RNA1509_1919} {RNA1310_2969} {RNA815_850.1}

Mlig455_031949 {REF} {Length: 3861} {Pfam: HEAT-like repeat [PF13513.8, score=58.9]; HEAT repeat [PF02985.24, score=41.2]; Importin-beta N-terminal domain [PF03810.21, score=39.0]; HEAT repeats [PF13646.8, score=36.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=24.0]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=23.1]} {Human: ENSG00000108424, KPNB1, karyopherin subunit beta 1, [RH, Score=983, Expect=0.0]} {Mouse: ENSMUSG00000001440, Kpnb1, karyopherin (importin) beta 1, [RH, Score=979, Expect=0.0]} {Dmel: FBgn0262743, Fs(2)Ket, Female sterile (2) Ketel, [RH, Score=881, Expect=0.0]} {Celegans: WBGene00002075, imb-1, IMportin Beta family, [RH, Score=728, Expect=0.0]} {Smed: dd_Smed_v6_3466_0_1, dd_Smed_v6_3466_0_1, [RH, Score=871, Expect=0.0]} {RNA1509_10050, RNA1509_1919} {RNA1310_2969, RNA1509_10050} {RNA1509_10050, RNA815_850.1}
31. MligTC455_32076 319 6.65 Mlig455_058401

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_058401 {REF} {Length: 1003} {Pfam: Homeodomain-like domain [PF13384.8, score=33.5]; Helix-turn-helix domain [PF13936.8, score=33.4]; Helix-turn-helix domain of resolvase [PF02796.17, score=25.9]; Helix-turn-helix domain [PF13518.8, score=23.6]; Winged helix-turn helix [PF13551.8, score=22.4]; Tc3 transposase [PF11427.10, score=21.0]; 'Paired box' domain [PF00292.20, score=19.9]} {RNA1509_49032} {RNA1310_37860, RNA1509_49032} {RNA1509_49032, RNA815_36697}
32. MligTC455_49428 298 6.2 Mlig455_005078

Neo: Irradiation

Age: -

Region-enriched R5: 2.298/0.00000

 0.953 - - - 0.953 - - Mlig455_005078 {REF} {Length: 3358} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=45.7]; Zinc finger, C2H2 type [PF00096.28, score=25.1]; C2H2-type zinc finger [PF13894.8, score=21.5]; Protein of unknown function (DUF2722) [PF10846.10, score=20.3]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [RH, Score=177, Expect=3e-48]} {RNA1509_19024} {RNA1310_8889} {RNA815_15557}
33. MligTC455_07920 131 2.73 Mlig455_029217

Neo: -

Age: -

Region-enriched R6: 5.473/0.00039

 OSR1 0.952 - - - 0.952 - - Mlig455_029217 {REF} {Length: 1175} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.3]; Zinc-finger double domain [PF13465.8, score=46.0]; C2H2-type zinc finger [PF13894.8, score=40.7]; C2H2-type zinc finger [PF13912.8, score=28.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.7]} {Human: ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [RH, Score=178, Expect=8e-55]; ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [RH, Score=171, Expect=1e-51]} {Mouse: ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [RH, Score=176, Expect=3e-54]; ENSMUSG00000022330, Osr2, odd-skipped related 2, [RH, Score=171, Expect=5e-52]} {Dmel: FBgn0002985, odd, odd skipped, [RH, Score=159, Expect=2e-46]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [RH, Score=170, Expect=4e-52]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [RH, Score=189, Expect=3e-59]} {RNA1509_57522} {RNA1310_38770} {RNA815_13682.1}
34. MligTC455_12543 28 0.59 Mlig455_022741

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_022741 {REF} {Length: 665} {NoTransDecoderORF}
35. MligTC455_12645 62 1.3 Mlig455_021679

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_021679 {REF} {Length: 829} {NoTransDecoderORF} {RNA1509_32554} {RNA1310_11719}
36. MligTC455_26895 197 4.1 Mlig455_013036

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.303

Region-enriched R4: 5.042/0.00003
Region-enriched R5: 3.848/0.00004
Region-enriched R6: 3.112/0.01142

 0.952 - - - 0.952 - - Mlig455_013036 {REF} {Length: 2567} {RNA1509_16883} {RNA1310_7853.1} {RNA815_5910}
37. MligTC455_51452 116 2.42 Mlig455_059323

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_059323 {REF} {Length: 450} {NoTransDecoderORF} {RNA1509_51055} {RNA1310_86229.1} {RNA815_59589}
38. MligTC455_16213 641 13.35 Mlig455_042097

Neo: -

Age: -

Region-enriched R2: 2.338/0.01794

 0.95 - - - - 0.950 - Mlig455_042097 {REF} {Length: 599} {TRANSSPLICED} {RNA1509_10288} {RNA1310_13980} {RNA815_5182.1}
39. MligTC455_35094 87 1.81 Mlig455_005764, Mlig455_005781, Mlig455_005808

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.906

 CNNM2 0.95 - - - 0.950 - -

Mlig455_005764 {REF} {Length: 3715} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=113.5]; CBS domain [PF00571.30, score=21.2]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=189, Expect=1e-51]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=188, Expect=1e-51]} {Dmel: FBgn0262124, uex, unextended, [Score=172, Expect=2e-46]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=147, Expect=6e-38]} {Smed: dd_Smed_v6_6666_0_1, dd_Smed_v6_6666_0_1, [Score=221, Expect=1e-67]} {RNA1509_31868} {RNA1310_40700} {RNA815_5292}

Mlig455_005781 {REF} {Length: 3716} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=113.5]; CBS domain [PF00571.30, score=21.2]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=189, Expect=1e-51]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=188, Expect=1e-51]} {Dmel: FBgn0262124, uex, unextended, [Score=172, Expect=2e-46]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=147, Expect=6e-38]} {Smed: dd_Smed_v6_6666_0_1, dd_Smed_v6_6666_0_1, [Score=221, Expect=1e-67]} {RNA1509_31868} {RNA1310_40700} {RNA815_5292}

Mlig455_005808 {REF} {Length: 2715} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=113.9]; CBS domain [PF00571.30, score=21.8]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=189, Expect=1e-52]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=189, Expect=1e-52]} {Dmel: FBgn0262124, uex, unextended, [Score=171, Expect=1e-46]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=146, Expect=4e-38]} {Smed: dd_Smed_v6_6666_0_1, dd_Smed_v6_6666_0_1, [Score=222, Expect=1e-68]} {RNA1509_31868} {RNA1310_40700} {RNA815_5292}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA