Data search
Results for MligTC455_28605
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28605 | 7769 | 161.85 | Mlig455_013392 | Neo: - Age: - |
SDCBP | Mlig455_013392 {REF} {Length: 3330} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=85.3]; PDZ domain [PF17820.3, score=65.3]; PDZ domain [PF13180.8, score=43.8]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [RH, Score=298, Expect=5e-101]} {Mouse: ENSMUSG00000028249, Sdcbp, syndecan binding protein, [RH, Score=301, Expect=3e-102]} {Smed: dd_Smed_v6_387_0_1, dd_Smed_v6_387_0_1, [RH, Score=290, Expect=2e-98]} {RNA1509_15081, RNA1509_1662, RNA1509_57397, RNA1509_59498, RNA1509_7326, RNA1509_9212, RNA1509_9642} {RNA1310_20625.1, RNA1509_15081, RNA1509_57397, RNA1509_59498, RNA1509_7326, RNA1509_9212, RNA1509_9642} {RNA1509_15081, RNA1509_57397, RNA1509_59498, RNA1509_7326, RNA1509_9212, RNA1509_9642, RNA815_1721.1} |
Cumulative graph for MligTC455_28605
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.373 | 7.405 | 0.34707 | 0.99069 | |
| RegionR2 | 0.063 | 7.405 | 0.79810 | 1.00000 | |
| RegionR3 | 0.323 | 7.405 | 0.12195 | 0.60326 | |
| RegionR4 | 0.178 | 7.405 | 0.45261 | 0.78130 | |
| RegionR5 | -0.004 | 7.405 | 0.98431 | 1.00000 | |
| RegionR6 | 0.389 | 7.405 | 0.05986 | 0.45962 | |
| RegionR7 | 0.018 | 7.405 | 0.93662 | 1.00000 | |
| RegionR8 | -0.595 | 7.405 | 0.02636 | 0.31684 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.232 | 7.405 | 0.63658 | 1.00000 | |
| RegenerationR2 | -0.167 | 7.405 | 0.51539 | 0.87794 | |
| RegenerationR3 | -0.408 | 7.405 | 0.12568 | 0.54708 | |
| RegenerationR4 | -0.179 | 7.405 | 0.50937 | 0.87411 | |
| RegenerationR5 | 0.328 | 7.405 | 0.21199 | 0.64609 | |
| RegenerationR6 | -0.422 | 7.405 | 0.11338 | 0.41462 | |
| RegenerationBL | -0.568 | 7.405 | 0.03106 | 0.19707 | |
| RegenerationTP | 0.153 | 7.405 | 0.57458 | 0.94689 |
Genes with expression patterns similar to MligTC455_28605
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28605 | 7769 | 161.85 | Mlig455_013392 | Neo: - Age: - |
SDCBP | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013392 {REF} {Length: 3330} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=85.3]; PDZ domain [PF17820.3, score=65.3]; PDZ domain [PF13180.8, score=43.8]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [RH, Score=298, Expect=5e-101]} {Mouse: ENSMUSG00000028249, Sdcbp, syndecan binding protein, [RH, Score=301, Expect=3e-102]} {Smed: dd_Smed_v6_387_0_1, dd_Smed_v6_387_0_1, [RH, Score=290, Expect=2e-98]} {RNA1509_15081, RNA1509_1662, RNA1509_57397, RNA1509_59498, RNA1509_7326, RNA1509_9212, RNA1509_9642} {RNA1310_20625.1, RNA1509_15081, RNA1509_57397, RNA1509_59498, RNA1509_7326, RNA1509_9212, RNA1509_9642} {RNA1509_15081, RNA1509_57397, RNA1509_59498, RNA1509_7326, RNA1509_9212, RNA1509_9642, RNA815_1721.1} |
| 2. | MligTC455_42177 | 1954 | 40.71 | Mlig455_065113, Mlig455_065124 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_065113 {REF} {Length: 1592} {TRANSSPLICED} {RNA1509_29642, RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637} {RNA1310_23241.1, RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637} {RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637, RNA815_15481.1} Mlig455_065124 {REF} {Length: 2233} {TRANSSPLICED} {RNA1509_20191, RNA1509_29642, RNA1509_40909} {RNA1310_23241.1, RNA1509_20191, RNA1509_29642, RNA1509_40909} {RNA1509_20191, RNA1509_29642, RNA1509_40909, RNA815_15481.1} |
|
| 3. | MligTC455_39389 | 168 | 3.5 | Mlig455_038778 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.375 Region-enriched R5: 1.958/0.02473 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_038778 {REF} {Length: 3837} {RNA1509_47904} {RNA1310_8307, RNA1509_47904} {RNA1509_47904, RNA815_9089} | |
| 4. | MligTC455_48412 | 1608 | 33.5 | Mlig455_067102 | Neo: - Age: Down-Down-Up |
0.956 | - | - | - | - | 0.956 | - | Mlig455_067102 {REF} {Length: 1614} {TRANSSPLICED} {RNA1509_18861} {RNA1310_41212} {RNA815_44029} | |
| 5. | MligTC455_20770 | 1008 | 21.01 | Mlig455_053224, Mlig455_065048 | Neo: - Age: - |
ARHGAP39 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_053224 {REF} {Length: 5071} {Pfam: MyTH4 domain [PF00784.19, score=97.8]; RhoGAP domain [PF00620.29, score=64.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=22.9]} {Human: ENSG00000147799, ARHGAP39, Rho GTPase activating protein 39, [RH, Score=305, Expect=4e-89]} {Mouse: ENSMUSG00000033697, Arhgap39, Rho GTPase activating protein 39, [RH, Score=302, Expect=4e-88]} {Dmel: FBgn0038853, RhoGAP93B, Rho GTPase activating protein at 93B, [RH, Score=259, Expect=2e-72]} {Celegans: WBGene00022365, Y92H12BL.4, [RH, Score=142, Expect=1e-36]} {Smed: dd_Smed_v6_5836_0_1, dd_Smed_v6_5836_0_1, [RH, Score=214, Expect=2e-59]} {RNA1509_20743, RNA1509_37920, RNA1509_50847} {RNA1310_6549.1, RNA1509_20743, RNA1509_37920, RNA1509_50847} {RNA1509_20743, RNA1509_37920, RNA1509_50847, RNA815_6801} Mlig455_065048 {REF} {Length: 5179} {Pfam: MyTH4 domain [PF00784.19, score=97.8]; RhoGAP domain [PF00620.29, score=65.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=22.9]} {Human: ENSG00000147799, ARHGAP39, Rho GTPase activating protein 39, [RH, Score=307, Expect=1e-89]} {Mouse: ENSMUSG00000033697, Arhgap39, Rho GTPase activating protein 39, [RH, Score=304, Expect=1e-88]} {Dmel: FBgn0038853, RhoGAP93B, Rho GTPase activating protein at 93B, [RH, Score=260, Expect=8e-73]} {Celegans: WBGene00022365, Y92H12BL.4, [RH, Score=144, Expect=4e-37]} {Smed: dd_Smed_v6_5836_0_1, dd_Smed_v6_5836_0_1, [RH, Score=214, Expect=2e-59]} {RNA1509_20743, RNA1509_53778} {RNA1310_6549.1, RNA1509_53778} {RNA1509_53778, RNA815_6801} |