Data search
Results for MligTC455_28843
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28843 | 310 | 6.45 | Mlig455_020145 | Neo: - Age: Down-Up-Down |
Mlig455_020145 {REF} {Length: 838} {RNA1509_57120} {RNA1310_47368} {RNA815_25285.1} |
Cumulative graph for MligTC455_28843
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.821 | 3.145 | 0.61003 | 1.00000 | |
| RegionR2 | 1.264 | 3.145 | 0.08261 | 0.35260 | |
| RegionR3 | -0.404 | 3.145 | 0.55761 | 1.00000 | |
| RegionR4 | 1.41 | 3.145 | 0.03766 | 0.15931 | |
| RegionR5 | -0.591 | 3.145 | 0.36502 | 0.71741 | |
| RegionR6 | -1.914 | 3.145 | 0.01815 | 0.24068 | |
| RegionR7 | 1.328 | 3.145 | 0.04065 | 0.38542 | |
| RegionR8 | -0.272 | 3.145 | 0.78178 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.761 | 3.145 | 0.27291 | 0.97554 | |
| RegenerationR2 | 0.608 | 3.145 | 0.30466 | 0.74511 | |
| RegenerationR3 | 0.664 | 3.145 | 0.37171 | 0.78467 | |
| RegenerationR4 | -0.447 | 3.145 | 0.52323 | 0.88095 | |
| RegenerationR5 | 0.629 | 3.145 | 0.37208 | 0.78154 | |
| RegenerationR6 | 0.976 | 3.145 | 0.30123 | 0.65099 | |
| RegenerationBL | -0.156 | 3.145 | 0.86669 | 1.00000 | |
| RegenerationTP | -1.154 | 3.145 | 0.21914 | 0.66235 |
Genes with expression patterns similar to MligTC455_28843
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28843 | 310 | 6.45 | Mlig455_020145 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020145 {REF} {Length: 838} {RNA1509_57120} {RNA1310_47368} {RNA815_25285.1} | |
| 2. | MligTC455_51696 | 624 | 12.99 | Mlig455_011356 | Neo: - Age: - |
FAM47E | 3.56 | - | - | 0.887 | 0.950 | 0.832 | 0.891 | Mlig455_011356 {REF} {Length: 2028} {Pfam: FAM47 family [PF14642.8, score=51.3]} {Human: ENSG00000189157, FAM47E, family with sequence similarity 47 member E, [RH, Score=138, Expect=9e-36]} {Mouse: ENSMUSG00000078315, Fam47c, family with sequence similarity 47, member C, [RH, Score=119, Expect=6e-29]} {Smed: dd_Smed_v6_10346_0_1, dd_Smed_v6_10346_0_1, [RH, Score=293, Expect=6e-95]} {RNA1509_41096, RNA1509_54260, RNA1509_8031} {RNA1310_12665, RNA1509_41096, RNA1509_54260} {RNA1509_41096, RNA1509_54260, RNA815_4489.1} |
| 3. | MligTC455_21635 | 1157 | 24.11 | Mlig455_026396 | Neo: - Age: - |
SLC6A5 | 3.282 | - | - | 0.734 | 0.950 | 0.764 | 0.834 | Mlig455_026396 {REF} {Length: 3636} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=612.2]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=486, Expect=2e-161]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=490, Expect=6e-163]} {Dmel: FBgn0034911, CG5549, [Score=499, Expect=2e-162]} {Celegans: WBGene00004905, snf-6, Sodium-dependent acetylcholine transporter, [RH, Score=374, Expect=2e-119]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=459, Expect=1e-152]} {RNA1509_26562} {RNA1310_4707.2, RNA1509_26562} {RNA1509_26562, RNA815_1349.2} |
| 4. | MligTC455_32992 | 490 | 10.21 | Mlig455_038095, Mlig455_038097 | Neo: - Age: - Region-enriched R2: 2.886/0.00584 |
CFAP46 | 2.588 | - | - | - | 0.893 | 0.740 | 0.955 | Mlig455_038095 {REF} {Length: 9404} {Human: ENSG00000171811, CFAP46, cilia and flagella associated protein 46, [RH, Score=1014, Expect=0.0]} {Mouse: ENSMUSG00000049571, Cfap46, cilia and flagella associated protein 46, [RH, Score=742, Expect=0.0]} {Smed: dd_Smed_v6_14103_0_1, dd_Smed_v6_14103_0_1, [RH, Score=818, Expect=0.0]} {RNA1509_22612, RNA1509_24033} {RNA1310_152.1, RNA1509_24033} {RNA1509_24033, RNA815_852} Mlig455_038097 {REF} {Length: 2124} {Pfam: WXXGXW repeat (2 copies) [PF12779.9, score=37.5]} {RNA1509_22612} {RNA1310_53889} {RNA815_852} |
| 5. | MligTC455_32993 | 456 | 9.49 | Mlig455_068821 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.033 Region-enriched R2: 2.892/0.00773 |
CFAP46 | 2.578 | - | - | - | 0.896 | 0.731 | 0.951 | Mlig455_068821 {REF} {Length: 3199} {Human: ENSG00000171811, CFAP46, cilia and flagella associated protein 46, [Score=201, Expect=3e-52]} {Mouse: ENSMUSG00000049571, Cfap46, cilia and flagella associated protein 46, [Score=232, Expect=2e-62]} {Smed: dd_Smed_v6_14103_0_1, dd_Smed_v6_14103_0_1, [Score=238, Expect=6e-65]} {RNA1509_22612} {RNA1310_312.1} {RNA815_3411} |
| 6. | MligTC455_47807 | 2664 | 55.5 | Mlig455_050143 | Neo: - Age: - Region-specific R2: 3.807 Region-enriched R2: 2.561/0.00001 |
2.556 | - | 0.704 | - | 0.900 | - | 0.952 | Mlig455_050143 {REF} {Length: 1560} {RNA1509_1605, RNA1509_28756} {RNA1310_30659.1, RNA1509_28756} {RNA1509_28756, RNA815_13807} | |
| 7. | MligTC455_43528 | 1273 | 26.52 | Mlig455_068411 | Neo: - Age: Down-Up-Up |
2.492 | - | - | - | 0.954 | 0.732 | 0.806 | Mlig455_068411 {REF} {Length: 842} {Pfam: Pancreatic hormone peptide [PF00159.20, score=37.0]} {RNA1509_15391, RNA1509_36078, RNA1509_47628} {RNA1310_43859, RNA1509_15391, RNA1509_36078, RNA1509_47628} {RNA1509_15391, RNA1509_36078, RNA1509_47628, RNA815_26881} | |
| 8. | MligTC455_38356 | 44 | 0.91 | Mlig455_036859 | Neo: - Age: - |
1.788 | - | - | - | 0.832 | - | 0.956 | Mlig455_036859 {REF} {Length: 1883} {RNA1509_42586} {RNA1310_61726} {RNA815_15862} | |
| 9. | MligTC455_29048 | 529 | 11.01 | Mlig455_024096 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.420 Region-enriched R2: 1.997/0.00679 |
WDR49 | 1.753 | - | - | - | 0.803 | - | 0.950 | Mlig455_024096 {REF} {Length: 4603} {Pfam: WD domain, G-beta repeat [PF00400.34, score=72.6]; EF-hand domain pair [PF13833.8, score=25.0]; EF-hand domain pair [PF13499.8, score=20.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.2]} {Human: ENSG00000174776, WDR49, WD repeat domain 49, [RH, Score=754, Expect=0.0]} {Mouse: ENSMUSG00000104301, Wdr49, WD repeat domain 49, [RH, Score=471, Expect=1e-151]} {Dmel: FBgn0267449, WDY, WD40 Y, [Score=142, Expect=4e-34]} {Smed: dd_Smed_v6_13248_0_6, dd_Smed_v6_13248_0_6, [RH, Score=932, Expect=0.0]} {RNA1509_12036} {RNA1310_8128.1} {RNA815_8389.1} |
| 10. | MligTC455_29051 | 484 | 10.08 | Mlig455_064767 | Neo: - Age: - |
TMEM30A | 1.752 | - | - | - | 0.961 | - | 0.791 | Mlig455_064767 {REF} {Length: 2581} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=265.5]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [RH, Score=234, Expect=7e-73]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=241, Expect=6e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=294, Expect=8e-97]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=246, Expect=3e-78]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=274, Expect=3e-89]} {RNA1509_38539, RNA1509_38955} {RNA1310_9371, RNA1509_38539, RNA1509_38955} {RNA1509_38539, RNA1509_38955, RNA815_12157} |
| 11. | MligTC455_29297 | 533 | 11.1 | Mlig455_033889 | Neo: - Age: Up-Down-Up Region-enriched R2: 2.005/0.00703 |
1.743 | - | - | - | 0.952 | - | 0.791 | Mlig455_033889 {REF} {Length: 4369} {TRANSSPLICED} {Pfam: Phage integrase family [PF00589.24, score=26.0]} {RNA1509_19505, RNA1509_60118} {RNA1310_1707, RNA1509_19505, RNA1509_60118} {RNA1509_19505, RNA1509_60118, RNA815_3378} | |
| 12. | MligTC455_37786 | 1733 | 36.1 | Mlig455_019324, Mlig455_019438, Mlig455_019545 | Neo: - |
1.716 | - | - | - | 0.950 | - | 0.766 | Mlig455_019324 {REF} {Length: 3964} {Pfam: FAM216B protein family [PF15107.8, score=19.0]} {RNA1509_21362, RNA1509_30523} {RNA1310_10336.1, RNA1509_30523} {RNA1509_30523, RNA815_4271} Mlig455_019438 {REF} {Length: 1903} {Pfam: FAM216B protein family [PF15107.8, score=19.0]} {RNA1509_21362} {RNA1310_10336.1, RNA1509_21362} {RNA1509_21362, RNA815_4271} Mlig455_019545 {REF} {Length: 3361} {Pfam: FAM216B protein family [PF15107.8, score=18.9]} {RNA1509_21362} {RNA1310_10336.1} {RNA815_4271} |
|
| 13. | MligTC455_19501 | 417 | 8.69 | Mlig455_000873, Mlig455_000990 | Neo: - |
SPTBN1 | 1.671 | - | - | - | 0.951 | 0.720 | - | Mlig455_000873 {REF} {Length: 8852} {Pfam: Spectrin repeat [PF00435.23, score=787.8]; Calponin homology (CH) domain [PF00307.33, score=149.5]; Pleckstrin homology domain [PF15410.8, score=68.0]; PH domain [PF00169.31, score=44.3]; CAMSAP CH domain [PF11971.10, score=28.8]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [RH, Score=2103, Expect=0.0]} {Mouse: ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [RH, Score=2024, Expect=0.0]} {Dmel: FBgn0250788, beta-Spec, beta Spectrin, [RH, Score=2063, Expect=0.0]} {Celegans: WBGene00006803, unc-70, Spectrin beta chain, [RH, Score=2074, Expect=0.0]} {Smed: dd_Smed_v6_1684_0_1, dd_Smed_v6_1684_0_1, [RH, Score=2336, Expect=0.0]} {RNA1509_12295, RNA1509_33217, RNA1509_53653} {RNA1310_381, RNA1509_33217, RNA1509_53653} {RNA1509_33217, RNA1509_53653, RNA815_320} Mlig455_000990 {REF} {Length: 1231} {Pfam: Calponin homology (CH) domain [PF00307.33, score=117.7]; CAMSAP CH domain [PF11971.10, score=28.8]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [Score=349, Expect=1e-108]; ENSG00000173898, SPTBN2, spectrin beta, non-erythrocytic 2, [Score=338, Expect=6e-105]} {Mouse: ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [Score=349, Expect=8e-109]; ENSMUSG00000067889, Sptbn2, spectrin beta, non-erythrocytic 2, [Score=340, Expect=1e-105]} {Dmel: FBgn0250788, beta-Spec, beta Spectrin, [Score=338, Expect=4e-105]} {Celegans: WBGene00006803, unc-70, Spectrin beta chain, [Score=337, Expect=1e-104]} {Smed: dd_Smed_v6_12996_0_1, dd_Smed_v6_12996_0_1, [Score=332, Expect=8e-107]} {RNA1509_53653} {RNA1310_498} {RNA815_30557} |
| 14. | MligTC455_28724 | 128 | 2.66 | Mlig455_017717 | Neo: - Age: Up-Down-Down |
ANK1 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_017717 {REF} {Length: 9852} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=513.3]; Ankyrin repeats (many copies) [PF13637.8, score=459.4]; Ankyrin repeats (many copies) [PF13857.8, score=371.3]; Ankyrin repeat [PF13606.8, score=296.0]; Ankyrin repeat [PF00023.32, score=166.1]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=149, Expect=4e-35]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=143, Expect=2e-33]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=145, Expect=3e-34]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=142, Expect=3e-33]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=142, Expect=3e-33]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=147, Expect=9e-35]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=129, Expect=1e-29]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=171, Expect=7e-43]} {RNA1509_11517} {RNA1310_203} {RNA815_6981} |
| 15. | MligTC455_07624 | 777 | 16.19 | Mlig455_062715 | Neo: - Age: Up-Down-Up |
STOM | 0.958 | - | - | - | 0.958 | - | - | Mlig455_062715 {REF} {Length: 3417} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=112.9]} {Human: ENSG00000148175, STOM, stomatin, [RH, Score=365, Expect=3e-126]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [RH, Score=362, Expect=2e-125]} {Dmel: FBgn0260657, CG42540, [RH, Score=384, Expect=9e-131]} {Celegans: WBGene00006064, sto-2, Stomatin-2, [RH, Score=393, Expect=2e-136]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=379, Expect=3e-132]} {RNA1509_47159, RNA1509_9137} {RNA1310_11482.1, RNA1509_47159, RNA1509_9137} {RNA1509_47159, RNA1509_9137, RNA815_6842} |
| 16. | MligTC455_03719 | 3498 | 72.86 | Mlig455_015750 | Neo: Irradiation Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_015750 {REF} {Length: 2548} {TRANSSPLICED} {RNA1509_54771, RNA1509_5768} {RNA1310_11683, RNA1509_54771, RNA1509_5768} {RNA1509_54771, RNA1509_5768, RNA815_11103} | |
| 17. | MligTC455_35456 | 411 | 8.57 | Mlig455_015047, Mlig455_040037 | Neo: - Age: - Region-enriched R2: 3.288/0.00113 |
0.954 | - | - | 0.954 | - | - | - | Mlig455_015047 {REF} {Length: 2513} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=23.9]; Ankyrin repeats (many copies) [PF13637.8, score=21.3]; Ankyrin repeats (3 copies) [PF12796.9, score=20.8]} {RNA1509_17841} {RNA1310_31017} {RNA815_34939} Mlig455_040037 {REF} {Length: 2701} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=24.0]; Ankyrin repeats (many copies) [PF13637.8, score=21.2]; Ankyrin repeats (3 copies) [PF12796.9, score=20.8]} {RNA1509_17841} {RNA1310_31017} {RNA815_34939} |
|
| 18. | MligTC455_05018 | 264 | 5.5 | Mlig455_054686 | Neo: - Age: - |
ATP11B | 0.952 | - | - | - | - | 0.952 | - | Mlig455_054686 {REF} {Length: 5712} {TRANSSPLICED} {Pfam: Phospholipid-translocating P-type ATPase C-terminal [PF16212.7, score=188.9]; Phospholipid-translocating ATPase N-terminal [PF16209.7, score=71.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=48.2]; E1-E2 ATPase [PF00122.22, score=43.2]; Cation transport ATPase (P-type) [PF13246.8, score=43.0]} {Human: ENSG00000058063, ATP11B, ATPase phospholipid transporting 11B (putative), [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000037400, Atp11b, ATPase, class VI, type 11B, [RH, Score=841, Expect=0.0]; ENSMUSG00000031441, Atp11a, ATPase, class VI, type 11A, [RH, Score=803, Expect=0.0]} {Dmel: FBgn0259221, CG42321, [Score=605, Expect=0.0]} {Celegans: WBGene00019166, tat-2, Phospholipid-transporting ATPase, [Score=566, Expect=0.0]} {Smed: dd_Smed_v6_10670_0_1, dd_Smed_v6_10670_0_1, [RH, Score=925, Expect=0.0]} {RNA1509_6335} {RNA1310_2362.1, RNA1509_6335} {RNA1509_6335, RNA815_3422} |
| 19. | MligTC455_29759 | 352 | 7.34 | Mlig455_013570 | Neo: - Age: Down-Up-Down |
BEST1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_013570 {REF} {Length: 5144} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.7]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=124, Expect=1e-29]; ENSG00000142959, BEST4, bestrophin 4, [Score=122, Expect=1e-29]; ENSG00000127325, BEST3, bestrophin 3, [Score=119, Expect=7e-28]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=143, Expect=2e-36]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=227, Expect=8e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=172, Expect=6e-47]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=353, Expect=3e-117]} {RNA1509_54677} {RNA1310_17634} {RNA815_11997} |
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