Data search
Results for MligTC455_28886
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28886 | 479 | 9.97 | Mlig455_007371, Mlig455_017980, Mlig455_051928, Mlig455_058107 | Neo: - Age: - |
Mlig455_007371 {REF} {Length: 5258} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=142.4]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=5e-111]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_017980 {REF} {Length: 5136} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=140.4]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=3e-110]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_051928 {REF} {Length: 5411} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=140.5]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=379, Expect=4e-110]} {RNA1509_52872} {RNA1310_2280.1} {RNA815_694.2} Mlig455_058107 {REF} {Length: 7867} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=134.3]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=381, Expect=1e-110]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} |
Cumulative graph for MligTC455_28886
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.976 | 3.574 | 0.25579 | 0.90423 | |
| RegionR2 | 1.059 | 3.574 | 0.14164 | 0.46833 | |
| RegionR3 | 0.194 | 3.574 | 0.73564 | 1.00000 | |
| RegionR4 | -0.415 | 3.574 | 0.54235 | 0.86440 | |
| RegionR5 | -1.005 | 3.574 | 0.10399 | 0.31324 | |
| RegionR6 | 0.354 | 3.574 | 0.54653 | 1.00000 | |
| RegionR7 | 0.802 | 3.574 | 0.21199 | 0.82753 | |
| RegionR8 | 0.987 | 3.574 | 0.21223 | 0.81633 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.92 | 3.574 | 0.79525 | 1.00000 | |
| RegenerationR2 | -0.806 | 3.574 | 0.18297 | 0.62566 | |
| RegenerationR3 | 0.036 | 3.574 | 0.95729 | 1.00000 | |
| RegenerationR4 | -0.111 | 3.574 | 0.87076 | 1.00000 | |
| RegenerationR5 | 0.689 | 3.574 | 0.31756 | 0.74160 | |
| RegenerationR6 | 0.536 | 3.574 | 0.42311 | 0.75334 | |
| RegenerationBL | 1.523 | 3.574 | 0.00995 | 0.10043 | |
| RegenerationTP | -0.156 | 3.574 | 0.83716 | 1.00000 |
Genes with expression patterns similar to MligTC455_28886
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28886 | 479 | 9.97 | Mlig455_007371, Mlig455_017980, Mlig455_051928, Mlig455_058107 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007371 {REF} {Length: 5258} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=142.4]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=5e-111]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_017980 {REF} {Length: 5136} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=140.4]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=3e-110]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_051928 {REF} {Length: 5411} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=140.5]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=379, Expect=4e-110]} {RNA1509_52872} {RNA1310_2280.1} {RNA815_694.2} Mlig455_058107 {REF} {Length: 7867} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=134.3]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=381, Expect=1e-110]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} |
|
| 2. | MligTC455_28885 | 254 | 5.3 | Mlig455_044378, Mlig455_047614 | Neo: - Age: - |
5.854 | 0.980 | 0.956 | 0.986 | 0.971 | 0.991 | 0.970 | Mlig455_044378 {REF} {Length: 4881} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=142.9]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=382, Expect=2e-111]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_047614 {REF} {Length: 3468} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=116.0]} {Celegans: WBGene00007723, C25F9.2, [Score=300, Expect=4e-88]} {RNA1509_17816} {RNA1310_2280.1} {RNA815_694.2} |
|
| 3. | MligTC455_28887 | 210 | 4.38 | Mlig455_012627, Mlig455_062854 | Neo: - Age: - |
4.623 | 0.947 | - | 0.847 | 0.883 | 0.967 | 0.979 | Mlig455_012627 {REF} {Length: 2369} {RNA1509_49147} {RNA1310_4067} {RNA815_2940.1} Mlig455_062854 {REF} {Length: 8921} {RNA1509_57671} {RNA1310_4067, RNA1509_57671} {RNA1509_57671, RNA815_2940.1} |
|
| 4. | MligTC455_42723 | 666 | 13.88 | Mlig455_069654 | Neo: Irradiation Age: - Region-enriched R7: 2.955/0.00360 Regeneration-upregulated BL: 3.069 Regeneration-enriched BL: 3.069 |
1.677 | - | - | - | 0.716 | 0.961 | - | Mlig455_069654 {REF} {Length: 1471} {RNA1310_30663.1} {RNA815_50207} | |
| 5. | MligTC455_53942 | 379 | 7.9 | Mlig455_049460 | Neo: - Age: - |
ZDHHC17 | 0.989 | - | - | - | 0.989 | - | - | Mlig455_049460 {REF} {Length: 3942} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=108.7]; Ankyrin repeats (many copies) [PF13637.8, score=100.7]; Ankyrin repeats (3 copies) [PF12796.9, score=97.6]; Ankyrin repeats (many copies) [PF13857.8, score=81.4]; Ankyrin repeat [PF13606.8, score=69.8]; Ankyrin repeat [PF00023.32, score=66.5]; Anti-sigma-K factor rskA [PF10099.11, score=19.2]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [RH, Score=403, Expect=7e-132]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [RH, Score=403, Expect=5e-132]} {Dmel: FBgn0259824, Hip14, Huntingtin-interacting protein 14, [RH, Score=369, Expect=5e-119]} {Celegans: WBGene00044071, dhhc-14, Palmitoyltransferase, [RH, Score=186, Expect=6e-51]} {Smed: dd_Smed_v6_2983_0_1, dd_Smed_v6_2983_0_1, [RH, Score=461, Expect=5e-155]} {RNA1509_10487, RNA1509_36027, RNA1509_52255, RNA1509_53627, RNA1509_57906, RNA1509_58938} {RNA1310_11376.1, RNA1509_36027, RNA1509_52255, RNA1509_53627, RNA1509_57906, RNA1509_58938} {RNA1509_36027, RNA1509_52255, RNA1509_53627, RNA1509_57906, RNA1509_58938, RNA815_8210} |
| 6. | MligTC455_32786 | 131 | 2.74 | Mlig455_049672 | Neo: - Age: - Region-enriched R8: 3.549/0.01587 |
0.978 | - | - | - | - | 0.978 | - | Mlig455_049672 {REF} {Length: 1559} {RNA1509_2768} {RNA1310_57876} {RNA815_42450.2} | |
| 7. | MligTC455_42855 | 321 | 6.69 | Mlig455_011828 | Neo: - Age: Down-Up-Down |
THAP2 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_011828 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=60.9]} {Human: ENSG00000173451, THAP2, THAP domain containing 2, [Score=52.4, Expect=3e-07]; ENSG00000168152, THAP9, THAP domain containing 9, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000020137, Thap2, THAP domain containing, apoptosis associated protein 2, [Score=50.8, Expect=6e-07]} {RNA1509_30804} {RNA1310_9675.1} {RNA815_29658} |
| 8. | MligTC455_28195 | 1266 | 26.37 | Mlig455_000388, Mlig455_002395, Mlig455_003523, Mlig455_003524, Mlig455_004974, Mlig455_011782, Mlig455_028491, Mlig455_042262, Mlig455_043247, Mlig455_058189, Mlig455_061977, Mlig455_063875, Mlig455_071115 | Neo: - Age: Up-Down-Up Regeneration-upregulated BL: 2.615 Regeneration-enriched BL: 2.615 |
FBXO16 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_000388 {REF} {Length: 620} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729} Mlig455_002395 {REF} {Length: 1147} {NoTransDecoderORF} {RNA1509_2932} {RNA1310_4439.1} {RNA815_12729} Mlig455_003523 {REF} {Length: 7744} {NoTransDecoderORF} {RNA1509_2932, RNA1509_54696} {RNA1310_4439.1, RNA1509_54696} {RNA1509_54696, RNA815_12729} Mlig455_003524 {REF} {Length: 214} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729} Mlig455_004974 {REF} {Length: 17755} {Pfam: Cysteine rich repeat [PF02363.21, score=25.6]} {Celegans: WBGene00018026, F35A5.4, [Score=58.5, Expect=1e-10]} {RNA1509_26270, RNA1509_30620} {RNA1310_13656, RNA1509_26270} {RNA1509_26270, RNA815_1450.1} Mlig455_011782 {REF} {Length: 10876} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} Mlig455_028491 {REF} {Length: 773} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729} Mlig455_042262 {REF} {Length: 2209} {NoTransDecoderORF} {RNA1509_2932} {RNA1310_4439.1} {RNA815_12729} Mlig455_043247 {REF} {Length: 1123} {NoTransDecoderORF} {RNA1509_24710} {RNA1310_4439.1} {RNA815_12729} Mlig455_058189 {REF} {Length: 15225} {Pfam: F-box-like [PF12937.9, score=24.2]; F-box domain [PF00646.35, score=22.0]; Domain of unknown function (DUF4508) [PF14969.8, score=19.2]} {Human: ENSG00000214050, FBXO16, F-box protein 16, [RH, Score=161, Expect=5e-46]} {Mouse: ENSMUSG00000034532, Fbxo16, F-box protein 16, [RH, Score=155, Expect=4e-44]} {Dmel: FBgn0041171, ago, archipelago, [Score=79.0, Expect=1e-15]} {Smed: dd_Smed_v6_12714_0_1, dd_Smed_v6_12714_0_1, [RH, Score=203, Expect=2e-62]} {RNA1509_30620} {RNA1310_13656} {RNA815_1450.1} Mlig455_061977 {REF} {Length: 246} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729} Mlig455_063875 {REF} {Length: 2269} {NoTransDecoderORF} {RNA1509_2932} {RNA1310_43735.1} {RNA815_1450.1} Mlig455_071115 {REF} {Length: 343} {NoTransDecoderORF} {RNA1310_4439.2} {RNA815_12729} |
| 9. | MligTC455_53572 | 2350 | 48.96 | Mlig455_010811 | Neo: - Age: Down-Up-Down Region-enriched R8: 7.256/0.00000 |
LMNB1 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_010811 {REF} {Length: 2584} {Pfam: Intermediate filament protein [PF00038.23, score=182.9]; Lamin Tail Domain [PF00932.21, score=45.3]; Septation ring formation regulator, EzrA [PF06160.14, score=24.8]} {Human: ENSG00000113368, LMNB1, lamin B1, [Score=182, Expect=7e-49]; ENSG00000160789, LMNA, lamin A/C, [Score=177, Expect=6e-47]} {Mouse: ENSMUSG00000024590, Lmnb1, lamin B1, [Score=180, Expect=2e-48]; ENSMUSG00000028063, Lmna, lamin A, [Score=172, Expect=2e-45]} {Dmel: FBgn0002525, Lam, Lamin, [RH, Score=201, Expect=9e-56]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [RH, Score=403, Expect=7e-133]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_3449} {RNA1310_9642} {RNA815_3251.1} |
| 10. | MligTC455_53887 | 573 | 11.94 | Mlig455_051174, Mlig455_062979 | Neo: Irradiation Age: - Region-enriched R5: 1.527/0.00055 |
MAP2K7 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_051174 {REF} {Length: 3601} {Pfam: Protein kinase domain [PF00069.27, score=157.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.4]} {Human: ENSG00000076984, MAP2K7, mitogen-activated protein kinase kinase 7, [Score=268, Expect=9e-85]} {Mouse: ENSMUSG00000002948, Map2k7, mitogen-activated protein kinase kinase 7, [Score=269, Expect=5e-85]; ENSMUSG00000109061, Gm49320, predicted gene, 49320, [Score=266, Expect=3e-83]} {Dmel: FBgn0010303, hep, hemipterous, [Score=273, Expect=3e-86]} {Celegans: WBGene00003185, mek-1, Dual specificity mitogen-activated protein kinase kinase mek-1, [Score=243, Expect=1e-76]} {Smed: dd_Smed_v6_3580_0_1, dd_Smed_v6_3580_0_1, [Score=265, Expect=2e-82]} {RNA1509_12701} {RNA1310_6606} {RNA815_13525} Mlig455_062979 {REF} {Length: 3517} {Pfam: Protein kinase domain [PF00069.27, score=169.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.8]} {Human: ENSG00000076984, MAP2K7, mitogen-activated protein kinase kinase 7, [Score=280, Expect=5e-89]} {Mouse: ENSMUSG00000002948, Map2k7, mitogen-activated protein kinase kinase 7, [Score=281, Expect=2e-89]; ENSMUSG00000109061, Gm49320, predicted gene, 49320, [Score=278, Expect=4e-87]} {Dmel: FBgn0010303, hep, hemipterous, [Score=286, Expect=1e-90]} {Celegans: WBGene00003185, mek-1, Dual specificity mitogen-activated protein kinase kinase mek-1, [Score=254, Expect=2e-80]} {Smed: dd_Smed_v6_3580_0_2, dd_Smed_v6_3580_0_2, [Score=279, Expect=6e-87]} {RNA1509_35524} {RNA1310_6445, RNA1509_35524} {RNA1509_35524, RNA815_13525} |
| 11. | MligTC455_47131 | 1841 | 38.35 | Mlig455_045626, Mlig455_045684 | Neo: - Age: Down-Up-Up Region-enriched R8: 3.370/0.00000 |
OVOL1 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_045626 {REF} {Length: 1791} {Pfam: Zinc-finger double domain [PF13465.8, score=54.3]; Zinc finger, C2H2 type [PF00096.28, score=48.2]; C2H2-type zinc finger [PF13894.8, score=31.2]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [Score=172, Expect=2e-52]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=169, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=181, Expect=7e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=185, Expect=8e-58]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=182, Expect=8e-57]} {RNA1509_42049} {RNA1310_21041} {RNA815_8487.1} Mlig455_045684 {REF} {Length: 1609} {Pfam: Zinc-finger double domain [PF13465.8, score=53.6]; Zinc finger, C2H2 type [PF00096.28, score=47.2]; C2H2-type zinc finger [PF13894.8, score=35.3]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=174, Expect=7e-53]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=172, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=184, Expect=8e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=188, Expect=5e-58]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=183, Expect=2e-56]} {RNA1509_42049} {RNA1310_21041} {RNA815_8487.1} |
| 12. | MligTC455_51664 | 54 | 1.12 | Mlig455_022480 | Neo: - Age: - Region-enriched R8: 5.026/0.00763 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_022480 {REF} {Length: 1388} {Pfam: F5/8 type C domain [PF00754.27, score=22.0]} {Smed: dd_Smed_v6_36585_0_2, dd_Smed_v6_36585_0_2, [Score=44.7, Expect=1e-05]} {RNA1509_36923} {RNA1310_25963} {RNA815_41480} | |
| 13. | MligTC455_47130 | 799 | 16.64 | Mlig455_045674 | Neo: - Age: Down-Up-Down Region-enriched R8: 3.665/0.00000 |
OVOL1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_045674 {REF} {Length: 2321} {Pfam: Zinc-finger double domain [PF13465.8, score=53.3]; Zinc finger, C2H2 type [PF00096.28, score=47.1]; C2H2-type zinc finger [PF13894.8, score=35.2]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=174, Expect=7e-53]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=172, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=184, Expect=9e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=187, Expect=1e-57]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=183, Expect=3e-56]} {RNA1509_42049} {RNA1310_21041, RNA1509_42049} {RNA1509_42049, RNA815_8487.1} |
| 14. | MligTC455_52844 | 80 | 1.66 | Mlig455_026050 | Neo: - Age: - |
PHF12 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_026050 {REF} {Length: 2596} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=63.1]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [RH, Score=96.7, Expect=3e-20]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [RH, Score=97.1, Expect=2e-20]} {Dmel: FBgn0029861, CG3815, [RH, Score=154, Expect=3e-39]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [RH, Score=79.3, Expect=4e-15]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [RH, Score=194, Expect=2e-53]} {RNA1509_54500, RNA1509_58497} {RNA1310_10137, RNA1509_58497} {RNA1509_58497, RNA815_5155} |
| 15. | MligTC455_01437 | 12 | 0.25 | Mlig455_002327 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_002327 {REF} {Length: 336} {NoTransDecoderORF} {RNA1509_47133} {RNA1310_49616.2} {RNA815_60895} | |
| 16. | MligTC455_43011 | 161 | 3.36 | Mlig455_039298 | Neo: - |
PPP2R5D | 0.954 | - | - | - | 0.954 | - | - | Mlig455_039298 {REF} {Length: 4392} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=346.4]} {Human: ENSG00000112640, PPP2R5D, protein phosphatase 2 regulatory subunit B'delta, [Score=485, Expect=3e-166]; ENSG00000078304, PPP2R5C, protein phosphatase 2 regulatory subunit B'gamma, [Score=466, Expect=2e-159]} {Mouse: ENSMUSG00000059409, Ppp2r5d, protein phosphatase 2, regulatory subunit B', delta, [Score=482, Expect=5e-165]} {Dmel: FBgn0042693, wrd, well-rounded, [Score=451, Expect=2e-153]} {Celegans: WBGene00007554, pptr-2, Protein Phosphatase 2A (Two A) Regulatory subunit, [Score=450, Expect=6e-153]} {Smed: dd_Smed_v6_2613_0_1, dd_Smed_v6_2613_0_1, [Score=464, Expect=2e-158]} {RNA1509_7339} {RNA1310_6432.1} {RNA815_3786} |
| 17. | MligTC455_37013 | 102 | 2.12 | Mlig455_028784 | Neo: - Age: - |
RPA1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_028784 {REF} {Length: 4559} {Pfam: Replication protein A OB domain [PF16900.7, score=62.3]; OB-fold nucleic acid binding domain [PF01336.27, score=43.1]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=92.4, Expect=7e-20]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=86.3, Expect=5e-18]} {RNA1509_12100} {RNA1310_68428} {RNA815_14259} |