Data search
Results for MligTC455_28893
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28893 | 321 | 6.70 | Mlig455_018770, Mlig455_070466 | Neo: - |
Mlig455_018770 {REF} {Length: 4995} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=141.9]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=5e-111]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_070466 {REF} {Length: 2350} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=47.7]} {Celegans: WBGene00007723, C25F9.2, [Score=157, Expect=3e-42]} {RNA1509_17816} {RNA1310_2280.1} {RNA815_694.2} |
Cumulative graph for MligTC455_28893
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.097 | 3.196 | 0.36390 | 1.00000 | |
| RegionR2 | -0.587 | 3.196 | 0.67303 | 1.00000 | |
| RegionR3 | 1.202 | 3.196 | 0.11273 | 0.58429 | |
| RegionR4 | 2.308 | 3.196 | 0.01503 | 0.08263 | |
| RegionR5 | -0.215 | 3.196 | 0.87731 | 1.00000 | |
| RegionR6 | 1.139 | 3.196 | 0.15801 | 0.70804 | |
| RegionR7 | -0.264 | 3.196 | 0.85690 | 1.00000 | |
| RegionR8 | -0.487 | 3.196 | 0.76246 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.263 | 3.196 | 0.61574 | 1.00000 | |
| RegenerationR2 | -0.792 | 3.196 | 0.30503 | 0.74533 | |
| RegenerationR3 | -1.013 | 3.196 | 0.21504 | 0.65185 | |
| RegenerationR4 | -1.083 | 3.196 | 0.21980 | 0.66731 | |
| RegenerationR5 | 0.75 | 3.196 | 0.38117 | 0.78741 | |
| RegenerationR6 | 0.071 | 3.196 | 0.93306 | 1.00000 | |
| RegenerationBL | 0.989 | 3.196 | 0.24008 | 0.59331 | |
| RegenerationTP | 0.766 | 3.196 | 0.46912 | 0.88012 |
Genes with expression patterns similar to MligTC455_28893
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28893 | 321 | 6.7 | Mlig455_018770, Mlig455_070466 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018770 {REF} {Length: 4995} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=141.9]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=5e-111]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_070466 {REF} {Length: 2350} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=47.7]} {Celegans: WBGene00007723, C25F9.2, [Score=157, Expect=3e-42]} {RNA1509_17816} {RNA1310_2280.1} {RNA815_694.2} |
|
| 2. | MligTC455_31906 | 195 | 4.06 | Mlig455_068976 | Neo: - Age: Up-Up-Down |
1.796 | - | - | 0.951 | 0.845 | - | - | Mlig455_068976 {REF} {Length: 6455} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=26.5]} {RNA1509_31473} {RNA1310_5450.1} {RNA815_16253.2} | |
| 3. | MligTC455_39846 | 11660 | 242.93 | Mlig455_004341, Mlig455_004353 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.306 Region-enriched R4: 1.674/0.00000 Regeneration-enriched BL: 1.619 |
CCT7 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_004341 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1310_8189.1, RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695, RNA815_2882.1} Mlig455_004353 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_23051, RNA1509_8695} {RNA1310_8189.1, RNA1509_23051} {RNA1509_23051, RNA815_2882.1} |
| 4. | MligTC455_45874 | 2616 | 54.5 | Mlig455_025351, Mlig455_025395 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.206/0.01823 Regeneration-enriched BL: 2.077 |
DHX15 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_025351 {REF} {Length: 3219} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=76.1]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=54.1]; Helicase conserved C-terminal domain [PF00271.33, score=44.9]; DEAD/DEAH box helicase [PF00270.31, score=32.8]; AAA domain [PF13245.8, score=20.0]; AAA domain [PF13401.8, score=18.9]} {Human: ENSG00000109606, DHX15, DEAH-box helicase 15, [Score=1049, Expect=0.0]} {Mouse: ENSMUSG00000029169, Dhx15, DEAH (Asp-Glu-Ala-His) box polypeptide 15, [Score=1036, Expect=0.0]} {Dmel: FBgn0033160, Dhx15, DEAH-box helicase 15, [Score=1030, Expect=0.0]} {Celegans: WBGene00018967, ddx-15, Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15, [Score=941, Expect=0.0]} {Smed: dd_Smed_v6_2043_0_1, dd_Smed_v6_2043_0_1, [Score=1092, Expect=0.0]} {RNA1509_2301} {RNA1310_4345.1} {RNA815_408.1} Mlig455_025395 {REF} {Length: 2952} {TRANSSPLICED} {Pfam: Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=82.3]; Helicase associated domain (HA2) [PF04408.25, score=80.5]; Helicase conserved C-terminal domain [PF00271.33, score=44.8]; DEAD/DEAH box helicase [PF00270.31, score=32.7]; AAA domain [PF13245.8, score=20.0]; AAA domain [PF13401.8, score=18.8]} {Human: ENSG00000109606, DHX15, DEAH-box helicase 15, [RH, Score=1192, Expect=0.0]} {Mouse: ENSMUSG00000029169, Dhx15, DEAH (Asp-Glu-Ala-His) box polypeptide 15, [RH, Score=1191, Expect=0.0]} {Dmel: FBgn0033160, Dhx15, DEAH-box helicase 15, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00018967, ddx-15, Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15, [RH, Score=1094, Expect=0.0]} {Smed: dd_Smed_v6_2043_0_1, dd_Smed_v6_2043_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_2301} {RNA1310_4345.2} {RNA815_408.2} |
| 5. | MligTC455_21305 | 502 | 10.45 | Mlig455_000205 | Neo: - Age: - Region-enriched R4: 2.066/0.03569 Regeneration-upregulated R6: 1.910 Regeneration-enriched R6: 1.910 |
EZH1 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_000205 {REF} {Length: 3757} {Pfam: SET domain [PF00856.30, score=71.7]; CXC domain [PF18264.3, score=34.8]} {Human: ENSG00000108799, EZH1, enhancer of zeste 1 polycomb repressive complex 2 subunit, [RH, Score=402, Expect=6e-129]; ENSG00000106462, EZH2, enhancer of zeste 2 polycomb repressive complex 2 subunit, [RH, Score=398, Expect=4e-127]} {Mouse: ENSMUSG00000006920, Ezh1, enhancer of zeste 1 polycomb repressive complex 2 subunit, [RH, Score=402, Expect=7e-129]; ENSMUSG00000029687, Ezh2, enhancer of zeste 2 polycomb repressive complex 2 subunit, [RH, Score=400, Expect=4e-128]} {Dmel: FBgn0000629, E(z), Enhancer of zeste, [Score=498, Expect=7e-166]} {Celegans: WBGene00003220, mes-2, Histone-lysine N-methyltransferase mes-2, [RH, Score=178, Expect=1e-46]} {Smed: dd_Smed_v6_7754_0_1, dd_Smed_v6_7754_0_1, [RH, Score=330, Expect=3e-101]} {RNA1509_24843, RNA1509_55871} {RNA1310_7365, RNA1509_55871} {RNA1509_55871, RNA815_13114} |
| 6. | MligTC455_36979 | 659 | 13.73 | Mlig455_038265 | Neo: - Age: - |
SPTLC1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_038265 {REF} {Length: 3665} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=135.4]} {Human: ENSG00000090054, SPTLC1, serine palmitoyltransferase long chain base subunit 1, [RH, Score=416, Expect=2e-141]} {Mouse: ENSMUSG00000021468, Sptlc1, serine palmitoyltransferase, long chain base subunit 1, [RH, Score=431, Expect=9e-148]} {Dmel: FBgn0086532, Spt-I, Serine palmitoyltransferase subunit I, [RH, Score=396, Expect=3e-134]} {Celegans: WBGene00016020, sptl-1, Serine palmitoyltransferase 1, [RH, Score=421, Expect=6e-144]} {Smed: dd_Smed_v6_1567_0_1, dd_Smed_v6_1567_0_1, [RH, Score=458, Expect=1e-158]} {RNA1509_11888} {RNA1310_18923, RNA1509_11888} {RNA1509_11888, RNA815_5056} |
| 7. | MligTC455_25436 | 822 | 17.13 | Mlig455_023812 | Neo: Int S/G2/M Age: - Region-specific R5: 1.940 Region-enriched R5: 1.568/0.00000 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_023812 {REF} {Length: 2865} {TRANSSPLICED} {RNA1509_35998, RNA1509_5963} {RNA1310_13597, RNA1509_35998, RNA1509_5963} {RNA1509_35998, RNA1509_5963, RNA815_5824} | |
| 8. | MligTC455_26062 | 38 | 0.78 | Mlig455_043265 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_043265 {REF} {Length: 938} {RNA1509_2412} {RNA1310_50443} {RNA815_8781.1} |