TomoSeq data search

Data search

Results for MligTC455_36979

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36979

659

13.73

Mlig455_038265

Neo: -

Age: -

SPTLC1

Mlig455_038265 {REF} {Length: 3665} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=135.4]} {Human: ENSG00000090054, SPTLC1, serine palmitoyltransferase long chain base subunit 1, [RH, Score=416, Expect=2e-141]} {Mouse: ENSMUSG00000021468, Sptlc1, serine palmitoyltransferase, long chain base subunit 1, [RH, Score=431, Expect=9e-148]} {Dmel: FBgn0086532, Spt-I, Serine palmitoyltransferase subunit I, [RH, Score=396, Expect=3e-134]} {Celegans: WBGene00016020, sptl-1, Serine palmitoyltransferase 1, [RH, Score=421, Expect=6e-144]} {Smed: dd_Smed_v6_1567_0_1, dd_Smed_v6_1567_0_1, [RH, Score=458, Expect=1e-158]} {RNA1509_11888} {RNA1310_18923, RNA1509_11888} {RNA1509_11888, RNA815_5056}

Cumulative graph for MligTC455_36979

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.541	4.102	0.71309	1.00000
RegionR2	-0.236	4.102	0.65397	0.98793
RegionR3	0.371	4.102	0.35081	0.88631
RegionR4	0.556	4.102	0.26066	0.56307
RegionR5	0.557	4.102	0.11806	0.34243
RegionR6	-0.135	4.102	0.75418	1.00000
RegionR7	-0.493	4.102	0.41253	1.00000
RegionR8	-0.078	4.102	0.90995	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.105	4.102	0.96011	1.00000
RegenerationR2	-0.109	4.102	0.78242	0.98398
RegenerationR3	0.334	4.102	0.43548	0.82431
RegenerationR4	0.648	4.102	0.14506	0.57065
RegenerationR5	0.799	4.102	0.03562	0.31353
RegenerationR6	0.965	4.102	0.02650	0.20405
RegenerationBL	0.725	4.102	0.18519	0.51594
RegenerationTP	-0.761	4.102	0.27347	0.72155

Genes with expression patterns similar to MligTC455_36979

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36979	659	13.73	Mlig455_038265	Neo: - Age: -	SPTLC1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_038265 {REF} {Length: 3665} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=135.4]} {Human: ENSG00000090054, SPTLC1, serine palmitoyltransferase long chain base subunit 1, [RH, Score=416, Expect=2e-141]} {Mouse: ENSMUSG00000021468, Sptlc1, serine palmitoyltransferase, long chain base subunit 1, [RH, Score=431, Expect=9e-148]} {Dmel: FBgn0086532, Spt-I, Serine palmitoyltransferase subunit I, [RH, Score=396, Expect=3e-134]} {Celegans: WBGene00016020, sptl-1, Serine palmitoyltransferase 1, [RH, Score=421, Expect=6e-144]} {Smed: dd_Smed_v6_1567_0_1, dd_Smed_v6_1567_0_1, [RH, Score=458, Expect=1e-158]} {RNA1509_11888} {RNA1310_18923, RNA1509_11888} {RNA1509_11888, RNA815_5056}
2.	MligTC455_19562	303	6.31	Mlig455_051672	Neo: Int S/G2/M Age: -	MRPL39	1.804	-	-	-	0.844	0.960	-	Mlig455_051672 {REF} {Length: 2063} {TRANSSPLICED} {Pfam: TGS domain [PF02824.23, score=33.0]} {Human: ENSG00000154719, MRPL39, mitochondrial ribosomal protein L39, [RH, Score=180, Expect=7e-53]} {Mouse: ENSMUSG00000022889, Mrpl39, mitochondrial ribosomal protein L39, [RH, Score=189, Expect=1e-56]} {Dmel: FBgn0036462, mRpL39, mitochondrial ribosomal protein L39, [RH, Score=196, Expect=2e-59]} {Smed: dd_Smed_v6_7576_0_1, dd_Smed_v6_7576_0_1, [RH, Score=187, Expect=3e-56]} {RNA1509_38126, RNA1509_47333, RNA1509_9497} {RNA1310_16310, RNA1509_38126, RNA1509_47333} {RNA1509_38126, RNA1509_47333, RNA815_7406}
3.	MligTC455_40127	1207	25.14	Mlig455_017076	Neo: - Age: - Region-enriched R4: 1.077/0.01220	GRAMD1B	1.798	-	-	-	-	0.962	0.836	Mlig455_017076 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: VAD1 Analog of StAR-related lipid transfer domain [PF16016.7, score=85.8]} {Human: ENSG00000023171, GRAMD1B, GRAM domain containing 1B, [RH, Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000040111, Gramd1b, GRAM domain containing 1B, [RH, Score=80.9, Expect=7e-16]} {Dmel: FBgn0085423, CG34394, [RH, Score=69.3, Expect=3e-12]} {Smed: dd_Smed_v6_9149_0_1, dd_Smed_v6_9149_0_1, [Score=73.9, Expect=6e-14]} {RNA1509_11472} {RNA1310_17969, RNA1509_11472} {RNA1509_11472, RNA815_18157}
4.	MligTC455_28167	889	18.53	Mlig455_041562	Neo: Int S/G2/M Age: logFC(26M/2M)=0.271 Region-enriched R5: 1.459/0.00003 Region-enriched R4: 1.099/0.04929	DDX60	1.741	-	-	-	0.951	0.790	-	Mlig455_041562 {REF} {Length: 6838} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=61.6]; Type III restriction enzyme, res subunit [PF04851.17, score=45.6]; Helicase conserved C-terminal domain [PF00271.33, score=33.2]; Zinc finger, ZZ type [PF00569.19, score=25.6]} {Human: ENSG00000137628, DDX60, DExD/H-box helicase 60, [RH, Score=639, Expect=0.0]} {Mouse: ENSMUSG00000037921, Ddx60, DEAD (Asp-Glu-Ala-Asp) box polypeptide 60, [RH, Score=618, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [Score=84.7, Expect=5e-16]} {Celegans: WBGene00016194, C28H8.3, Uncharacterized helicase C28H8.3, [RH, Score=403, Expect=6e-116]} {Smed: dd_Smed_v6_10069_0_1, dd_Smed_v6_10069_0_1, [Score=84.7, Expect=3e-16]} {RNA1509_25102, RNA1509_2815} {RNA1310_707, RNA1509_25102, RNA1509_2815} {RNA1509_25102, RNA1509_2815, RNA815_269.1}
5.	MligTC455_21711	6648	138.51	Mlig455_046285	Neo: - Age: logFC(26M/2M)=0.517	SERBP1	1.703	-	-	-	0.962	0.741	-	Mlig455_046285 {REF} {Length: 3531} {Pfam: Hyaluronan / mRNA binding family [PF04774.17, score=74.9]; Intracellular hyaluronan-binding protein 4 N-terminal [PF16174.7, score=45.2]} {Human: ENSG00000142864, SERBP1, SERPINE1 mRNA binding protein 1, [RH, Score=62.0, Expect=1e-09]} {Mouse: ENSMUSG00000036371, Serbp1, serpine1 mRNA binding protein 1, [RH, Score=63.2, Expect=3e-10]} {Dmel: FBgn0046214, vig2, [RH, Score=82.0, Expect=1e-16]} {Smed: dd_Smed_v6_697_0_1, dd_Smed_v6_697_0_1, [RH, Score=73.9, Expect=2e-14]} {RNA1509_36959, RNA1509_7006} {RNA1310_11680.1, RNA1509_36959} {RNA1509_36959, RNA815_4163.1}
6.	MligTC455_21712	6583	137.15	Mlig455_061536	Neo: Int S/G2/M Age: logFC(26M/2M)=0.260	SERBP1	1.673	-	-	-	0.959	0.714	-	Mlig455_061536 {REF} {Length: 2886} {TRANSSPLICED} {Pfam: Hyaluronan / mRNA binding family [PF04774.17, score=74.9]; Intracellular hyaluronan-binding protein 4 N-terminal [PF16174.7, score=45.3]} {Human: ENSG00000142864, SERBP1, SERPINE1 mRNA binding protein 1, [RH, Score=62.0, Expect=8e-10]} {Mouse: ENSMUSG00000036371, Serbp1, serpine1 mRNA binding protein 1, [RH, Score=63.2, Expect=3e-10]} {Dmel: FBgn0046214, vig2, [RH, Score=82.0, Expect=1e-16]} {Smed: dd_Smed_v6_697_0_1, dd_Smed_v6_697_0_1, [RH, Score=73.9, Expect=2e-14]} {RNA1509_225, RNA1509_7006} {RNA1310_11680.1, RNA1509_225, RNA1509_7006} {RNA1509_225, RNA1509_7006, RNA815_4163.1}
7.	MligTC455_33594	28898	602.04	Mlig455_047282, Mlig455_069334	Neo: Int S/G2/M Age: logFC(26M/2M)=0.182	RPL18A	0.973	-	-	-	0.973	-	-	Mlig455_047282 {REF} {Length: 721} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A [PF01775.19, score=175.0]} {Human: ENSG00000105640, RPL18A, ribosomal protein L18a, [RH, Score=249, Expect=3e-85]} {Mouse: ENSMUSG00000045128, Rpl18a, ribosomal protein L18A, [RH, Score=249, Expect=2e-85]} {Dmel: FBgn0010409, RpL18A, Ribosomal protein L18A, [RH, Score=228, Expect=4e-77]} {Celegans: WBGene00004432, rpl-20, 60S ribosomal protein L18a, [RH, Score=212, Expect=5e-71]} {Smed: dd_Smed_v6_437_0_1, dd_Smed_v6_437_0_1, [RH, Score=220, Expect=2e-74]} {RNA1509_299} {RNA1310_49703} {RNA815_24602} Mlig455_069334 {REF} {Length: 644} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A [PF01775.19, score=175.0]} {Human: ENSG00000105640, RPL18A, ribosomal protein L18a, [RH, Score=249, Expect=3e-85]} {Mouse: ENSMUSG00000045128, Rpl18a, ribosomal protein L18A, [RH, Score=249, Expect=2e-85]} {Dmel: FBgn0010409, RpL18A, Ribosomal protein L18A, [RH, Score=228, Expect=4e-77]} {Celegans: WBGene00004432, rpl-20, 60S ribosomal protein L18a, [RH, Score=212, Expect=5e-71]} {Smed: dd_Smed_v6_437_0_1, dd_Smed_v6_437_0_1, [RH, Score=220, Expect=2e-74]} {RNA1509_299} {RNA1310_49703} {RNA815_24602}
8.	MligTC455_33593	14320	298.33	Mlig455_047332	Neo: - Age: logFC(26M/2M)=3.178	RPL18A	0.97	-	-	-	0.970	-	-	Mlig455_047332 {REF} {Length: 715} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A [PF01775.19, score=175.0]} {Human: ENSG00000105640, RPL18A, ribosomal protein L18a, [RH, Score=249, Expect=3e-85]} {Mouse: ENSMUSG00000045128, Rpl18a, ribosomal protein L18A, [RH, Score=249, Expect=2e-85]} {Dmel: FBgn0010409, RpL18A, Ribosomal protein L18A, [RH, Score=228, Expect=4e-77]} {Celegans: WBGene00004432, rpl-20, 60S ribosomal protein L18a, [RH, Score=212, Expect=5e-71]} {Smed: dd_Smed_v6_437_0_1, dd_Smed_v6_437_0_1, [RH, Score=220, Expect=2e-74]} {RNA1509_299} {RNA1310_49703, RNA1509_299} {RNA1509_299, RNA815_24602}
9.	MligTC455_31528	694	14.45	Mlig455_050895, Mlig455_067822	Neo: - Age: -	TREX2	0.963	-	-	-	-	0.963	-	Mlig455_050895 {REF} {Length: 6043} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.2]; WD domain, G-beta repeat [PF00400.34, score=27.0]; zinc-RING finger domain [PF14634.8, score=25.1]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.2]; RING-type zinc-finger [PF13445.8, score=22.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.0]; Prokaryotic RING finger family 4 [PF14447.8, score=18.8]} {Human: ENSG00000183479, TREX2, three prime repair exonuclease 2, [RH, Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [RH, Score=108, Expect=2e-25]} {Dmel: FBgn0031484, CG3165, [RH, Score=84.3, Expect=5e-17]} {RNA1509_53404} {RNA1310_9394} {RNA815_9986} Mlig455_067822 {REF} {Length: 3371} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=23.1]} {Human: ENSG00000183479, TREX2, three prime repair exonuclease 2, [RH, Score=99.8, Expect=9e-24]} {Mouse: ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [RH, Score=104, Expect=3e-25]; ENSMUSG00000031372, Trex2, three prime repair exonuclease 2, [RH, Score=100, Expect=2e-24]} {Dmel: FBgn0031484, CG3165, [RH, Score=85.5, Expect=3e-18]} {RNA1509_43862} {RNA1310_27101} {RNA815_5644.1}
10.	MligTC455_39846	11660	242.93	Mlig455_004341, Mlig455_004353	Neo: Int S/G2/M Age: logFC(26M/2M)=0.306 Region-enriched R4: 1.674/0.00000 Regeneration-enriched BL: 1.619 Regeneration-enriched R6: 1.119	CCT7	0.959	-	-	-	0.959	-	-	Mlig455_004341 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1310_8189.1, RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695, RNA815_2882.1} Mlig455_004353 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_23051, RNA1509_8695} {RNA1310_8189.1, RNA1509_23051} {RNA1509_23051, RNA815_2882.1}
11.	MligTC455_28893	321	6.7	Mlig455_018770, Mlig455_070466	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-1.313		0.957	-	-	-	0.957	-	-	Mlig455_018770 {REF} {Length: 4995} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=141.9]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=5e-111]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_070466 {REF} {Length: 2350} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=47.7]} {Celegans: WBGene00007723, C25F9.2, [Score=157, Expect=3e-42]} {RNA1509_17816} {RNA1310_2280.1} {RNA815_694.2}
12.	MligTC455_43651	2083	43.4	Mlig455_005311	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.329	TMOD3	0.957	-	-	-	0.957	-	-	Mlig455_005311 {REF} {Length: 2334} {TRANSSPLICED} {Pfam: Tropomodulin [PF03250.16, score=185.9]} {Human: ENSG00000138594, TMOD3, tropomodulin 3, [RH, Score=224, Expect=4e-70]; ENSG00000128872, TMOD2, tropomodulin 2, [RH, Score=214, Expect=2e-66]} {Mouse: ENSMUSG00000058587, Tmod3, tropomodulin 3, [RH, Score=221, Expect=4e-69]; ENSMUSG00000032186, Tmod2, tropomodulin 2, [RH, Score=213, Expect=4e-66]; ENSMUSG00000028328, Tmod1, tropomodulin 1, [RH, Score=213, Expect=4e-66]} {Dmel: FBgn0082582, tmod, tropomodulin, [RH, Score=273, Expect=1e-87]} {Celegans: WBGene00006823, unc-94, Tropomodulin, [RH, Score=247, Expect=6e-79]} {Smed: dd_Smed_v6_3279_0_1, dd_Smed_v6_3279_0_1, [RH, Score=322, Expect=8e-109]} {RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065} {RNA1310_10808.2, RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065} {RNA1509_1524, RNA1509_28172, RNA1509_37888, RNA1509_48993, RNA1509_52065, RNA815_3504.1}
13.	MligTC455_29209	507	10.56	Mlig455_014725	Neo: - Age: -	APBA1	0.954	-	-	-	-	0.954	-	Mlig455_014725 {REF} {Length: 7049} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=140.1]; PDZ domain [PF00595.26, score=89.2]; PDZ domain [PF17820.3, score=55.3]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=496, Expect=4e-162]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=494, Expect=1e-162]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=494, Expect=1e-162]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=491, Expect=2e-165]} {Mouse: ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=496, Expect=6e-162]; ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=492, Expect=7e-162]} {Dmel: FBgn0052677, X11Lbeta, [RH, Score=572, Expect=9e-180]} {Celegans: WBGene00002999, lin-10, [RH, Score=552, Expect=0.0]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [RH, Score=631, Expect=0.0]} {RNA1509_48945} {RNA1310_6524} {RNA815_2382}
14.	MligTC455_42846	590	12.29	Mlig455_010478, Mlig455_061899	Neo: - Age: - Region-enriched R4: 2.602/0.01388 Region-enriched R3: 2.177/0.04474	AGMO	0.954	-	-	-	-	0.954	-	Mlig455_010478 {REF} {Length: 1782} {Pfam: Fatty acid hydroxylase superfamily [PF04116.15, score=95.8]} {Human: ENSG00000187546, AGMO, alkylglycerol monooxygenase, [RH, Score=370, Expect=1e-124]} {Mouse: ENSMUSG00000050103, Agmo, alkylglycerol monooxygenase, [RH, Score=377, Expect=7e-128]} {Celegans: WBGene00007210, agmo-1, Alkylglycerol monooxygenase, [RH, Score=273, Expect=2e-86]} {Smed: dd_Smed_v6_3673_0_1, dd_Smed_v6_3673_0_1, [RH, Score=368, Expect=5e-125]} {RNA1509_14794} {RNA1310_15779} {RNA815_5967} Mlig455_061899 {REF} {Length: 1846} {Pfam: Fatty acid hydroxylase superfamily [PF04116.15, score=81.1]} {Human: ENSG00000187546, AGMO, alkylglycerol monooxygenase, [Score=273, Expect=4e-87]} {Mouse: ENSMUSG00000050103, Agmo, alkylglycerol monooxygenase, [Score=279, Expect=7e-90]} {Celegans: WBGene00007210, agmo-1, Alkylglycerol monooxygenase, [Score=181, Expect=1e-51]} {Smed: dd_Smed_v6_3673_0_1, dd_Smed_v6_3673_0_1, [Score=272, Expect=5e-88]} {RNA1509_14794} {RNA1310_15779} {RNA815_5967}
15.	MligTC455_52101	627	13.06	Mlig455_002568	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_002568 {REF} {Length: 1100} {Pfam: COMM domain [PF07258.16, score=27.3]} {Smed: dd_Smed_v6_1358_0_1, dd_Smed_v6_1358_0_1, [RH, Score=78.2, Expect=1e-17]} {RNA1509_38721, RNA1509_42859} {RNA1310_14453, RNA1509_38721, RNA1509_42859} {RNA1509_38721, RNA1509_42859, RNA815_15500.1}

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