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Results for MligTC455_28898

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28898 438 9.12 Mlig455_007410, Mlig455_013718, Mlig455_023882, Mlig455_031815, Mlig455_047666, Mlig455_048592

Neo: -

Age: -

Mlig455_007410 {REF} {Length: 379} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_013718 {REF} {Length: 306} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_023882 {REF} {Length: 222} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_031815 {REF} {Length: 445} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_4007.1} {RNA815_63603}

Mlig455_047666 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_4007.1} {RNA815_63603}

Mlig455_048592 {REF} {Length: 2146} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.2]} {RNA1509_10113} {RNA1310_4007.1} {RNA815_5184.1}

Cumulative graph for MligTC455_28898

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.42 3.624 0.11795 0.70722
RegionR2 1.256 3.624 0.29385 0.68236
RegionR3 1.255 3.624 0.21621 0.75772
RegionR4 1.265 3.624 0.26151 0.56441
RegionR5 0.469 3.624 0.64038 0.99273
RegionR6 0.672 3.624 0.53420 1.00000
RegionR7 0.499 3.624 0.64196 1.00000
RegionR8 1.004 3.624 0.40010 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.043 3.624 1.00000 1.00000
RegenerationR2 -0.185 3.624 0.84081 1.00000
RegenerationR3 -0.353 3.624 0.70811 0.95081
RegenerationR4 -0.259 3.624 0.78483 0.98244
RegenerationR5 0.444 3.624 0.63802 0.92593
RegenerationR6 -0.164 3.624 0.87057 1.00000
RegenerationBL -0.265 3.624 0.78855 1.00000
RegenerationTP 1.171 3.624 0.22693 0.67165


Genes with expression patterns similar to MligTC455_28898

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28898 438 9.12 Mlig455_007410, Mlig455_013718, Mlig455_023882, Mlig455_031815, Mlig455_047666, Mlig455_048592

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_007410 {REF} {Length: 379} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_013718 {REF} {Length: 306} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_023882 {REF} {Length: 222} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_031815 {REF} {Length: 445} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_4007.1} {RNA815_63603}

Mlig455_047666 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_4007.1} {RNA815_63603}

Mlig455_048592 {REF} {Length: 2146} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.2]} {RNA1509_10113} {RNA1310_4007.1} {RNA815_5184.1}
2. MligTC455_28899 143 2.97 Mlig455_014120, Mlig455_057248

Neo: -

Age: -

 5.85 0.992 0.953 0.998 0.938 0.973 0.996

Mlig455_014120 {REF} {Length: 710} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_057248 {REF} {Length: 296} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}
3. MligTC455_28900 76 1.59 Mlig455_047615

Neo: -

Age: -

 4.896 0.995 - 1.000 0.940 0.979 0.982 Mlig455_047615 {REF} {Length: 3351} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=89.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.8]} {Celegans: WBGene00007723, C25F9.2, [Score=177, Expect=4e-45]} {RNA1509_17816} {RNA1310_2280.1} {RNA815_694.1}
4. MligTC455_20790 215 4.47 Mlig455_000517

Neo: -

Age: -

 1.814 - - 0.851 0.963 - - Mlig455_000517 {REF} {Length: 7567} {Pfam: Schizosaccharomyces pombe repeat of unknown function (DUF963) [PF06131.13, score=29.2]} {RNA1509_26916, RNA1509_49774} {RNA1310_4216.1, RNA1509_49774} {RNA1509_49774, RNA815_5505.1}
5. MligTC455_15836 36 0.74 Mlig455_000292

Neo: -

Age: Up-Down-Down

 PLEKHG5 0.97 - - 0.970 - - - Mlig455_000292 {REF} {Length: 4512} {Pfam: RhoGEF domain [PF00621.22, score=89.5]; PH domain [PF17838.3, score=20.5]; Pleckstrin homology domain [PF15405.8, score=19.2]} {Human: ENSG00000171680, PLEKHG5, pleckstrin homology and RhoGEF domain containing G5, [Score=197, Expect=6e-52]} {Mouse: ENSMUSG00000039713, Plekhg5, pleckstrin homology domain containing, family G (with RhoGef domain) member 5, [Score=199, Expect=5e-53]} {Dmel: FBgn0261556, CG42674, [Score=147, Expect=6e-36]} {Celegans: WBGene00006476, rhgf-2, RHGF-2; RHo Guanine nucleotide exchange Factor, [RH, Score=147, Expect=3e-36]} {Smed: dd_Smed_v6_10072_0_1, dd_Smed_v6_10072_0_1, [RH, Score=179, Expect=8e-48]} {RNA1310_47096} {RNA815_53026}
6. MligTC455_11701 54 1.12 Mlig455_042837, Mlig455_045855, Mlig455_045871

Neo: -

Age: -

 0.963 - - 0.963 - - -

Mlig455_042837 {REF} {Length: 487} {RNA1310_85827} {RNA815_46819}

Mlig455_045855 {REF} {Length: 487} {RNA1310_85827} {RNA815_46819}

Mlig455_045871 {REF} {Length: 487} {RNA1310_85827} {RNA815_46819}
7. MligTC455_29623 308 6.41 Mlig455_040229

Neo: Int S/G2/M

Age: -

 RBM12 0.962 - - 0.962 - - - Mlig455_040229 {REF} {Length: 6205} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.5]} {Human: ENSG00000244462, RBM12, RNA binding motif protein 12, [RH, Score=104, Expect=4e-24]} {Mouse: ENSMUSG00000089824, Rbm12, RNA binding motif protein 12, [RH, Score=102, Expect=8e-24]} {Dmel: FBgn0035235, CG7879, [Score=116, Expect=1e-26]} {Celegans: WBGene00013703, Y106G6D.7, [Score=92.8, Expect=3e-19]} {Smed: dd_Smed_v6_5908_0_1, dd_Smed_v6_5908_0_1, [RH, Score=112, Expect=7e-26]} {RNA1509_8705} {RNA1310_1058.1} {RNA815_1326.1}
8. MligTC455_12151 45 0.93 Mlig455_008852

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_008852 {REF} {Length: 1057} {RNA1509_33014} {RNA1310_11113, RNA1509_33014} {RNA1509_33014, RNA815_40402.2}
9. MligTC455_28358 30 0.63 Mlig455_056879

Neo: -

Age: -

 0.959 - - 0.959 - - - Mlig455_056879 {REF} {Length: 4531} {RNA1509_11960} {RNA1310_1804.1} {RNA815_6018}
10. MligTC455_08808 98 2.04 Mlig455_029074

Neo: -

Age: -

Region-enriched R2: 8.479/0.00000

 0.958 - - - - 0.958 - Mlig455_029074 {REF} {Length: 722} {RNA1310_65090} {RNA815_34420}
11. MligTC455_41688 92 1.93 Mlig455_049719, Mlig455_052849

Neo: Germline

Age: -

 0.957 - - - - 0.957 -

Mlig455_049719 {REF} {Length: 1078} {NoTransDecoderORF} {RNA1310_141750} {RNA815_61478}

Mlig455_052849 {REF} {Length: 3482} {NoTransDecoderORF} {RNA1509_36480} {RNA1310_129329} {RNA815_34453}
12. MligTC455_31817 509 10.6 Mlig455_040709, Mlig455_064581

Neo: -

Age: -

Region-enriched R8: 2.108/0.01175
Region-enriched R2: 1.779/0.04703

 C16orf58 0.954 - 0.954 - - - -

Mlig455_040709 {REF} {Length: 2089} {TRANSSPLICED} {Pfam: Vitamin B6 photo-protection and homoeostasis [PF04884.16, score=287.5]} {Human: ENSG00000140688, C16orf58, chromosome 16 open reading frame 58, [RH, Score=242, Expect=6e-75]} {Mouse: ENSMUSG00000030780, BC017158, cDNA sequence BC017158, [RH, Score=241, Expect=8e-75]} {Dmel: FBgn0032700, CG10338, [RH, Score=212, Expect=5e-64]} {Smed: dd_Smed_v6_6378_0_4, dd_Smed_v6_6378_0_4, [RH, Score=283, Expect=1e-91]} {RNA1509_38646} {RNA1310_22643.2} {RNA815_12880}

Mlig455_064581 {REF} {Length: 5185} {Smed: dd_Smed_v6_6378_0_4, dd_Smed_v6_6378_0_4, [Score=47.0, Expect=1e-06]} {RNA1509_45578, RNA1509_49619} {RNA1310_9836, RNA1509_45578} {RNA1509_45578, RNA815_16395}
13. MligTC455_17642 473 9.85 Mlig455_053823

Neo: -

Age: -

 ME1 0.951 - - - 0.951 - - Mlig455_053823 {REF} {Length: 4736} {TRANSSPLICED} {Pfam: Malic enzyme, NAD binding domain [PF03949.17, score=307.8]; Malic enzyme, N-terminal domain [PF00390.21, score=257.1]} {Human: ENSG00000065833, ME1, malic enzyme 1, [RH, Score=682, Expect=0.0]; ENSG00000151376, ME3, malic enzyme 3, [RH, Score=676, Expect=0.0]} {Mouse: ENSMUSG00000030621, Me3, malic enzyme 3, NADP(+)-dependent, mitochondrial, [RH, Score=687, Expect=0.0]; ENSMUSG00000032418, Me1, malic enzyme 1, NADP(+)-dependent, cytosolic, [RH, Score=676, Expect=0.0]} {Dmel: FBgn0029155, Men-b, Malic enzyme b, [RH, Score=652, Expect=0.0]} {Celegans: WBGene00012983, men-1, Malic enzyme, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_2140_0_2, dd_Smed_v6_2140_0_2, [RH, Score=650, Expect=0.0]} {RNA1509_4479} {RNA1310_12690.1} {RNA815_3699}
14. MligTC455_36061 33 0.69 Mlig455_007140

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.616

 0.951 - - - - 0.951 - Mlig455_007140 {REF} {Length: 7333} {Smed: dd_Smed_v6_26523_0_1, dd_Smed_v6_26523_0_1, [Score=39.3, Expect=1e-05]} {RNA1509_21038} {RNA1310_17276.1} {RNA815_20842.1}

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