M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_36061

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36061 33 0.69 Mlig455_007140

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.616

 Mlig455_007140 {REF} {Length: 7333} {Smed: dd_Smed_v6_26523_0_1, dd_Smed_v6_26523_0_1, [Score=39.3, Expect=1e-05]} {RNA1509_21038} {RNA1310_17276.1} {RNA815_20842.1}

Cumulative graph for MligTC455_36061

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.877 1.016 0.99972 1.00000
RegionR2 3.356 1.016 0.08057 0.34799
RegionR3 -0.189 1.016 0.85162 1.00000
RegionR4 -0.592 1.016 0.69850 0.98748
RegionR5 -1.347 1.016 1.00000 1.00000
RegionR6 -1.035 1.016 0.95305 1.00000
RegionR7 0.133 1.016 0.86024 1.00000
RegionR8 0.55 1.016 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.475 1.016 0.89462 1.00000
RegenerationR2 0.059 1.016 0.91782 1.00000
RegenerationR3 2.154 1.016 0.28102 0.71319
RegenerationR4 0.84 1.016 0.61738 0.91978
RegenerationR5 2.728 1.016 0.06446 0.40052
RegenerationR6 0.702 1.016 0.64159 0.89397
RegenerationBL 1.713 1.016 0.42551 0.79362
RegenerationTP 3.835 1.016 0.15481 0.58199


Genes with expression patterns similar to MligTC455_36061

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36061 33 0.69 Mlig455_007140

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.616

 2 - - 1.000 - 1.000 - Mlig455_007140 {REF} {Length: 7333} {Smed: dd_Smed_v6_26523_0_1, dd_Smed_v6_26523_0_1, [Score=39.3, Expect=1e-05]} {RNA1509_21038} {RNA1310_17276.1} {RNA815_20842.1}
2. MligTC455_39382 127 2.66 Mlig455_011015, Mlig455_016546, Mlig455_027965, Mlig455_027966, Mlig455_031859, Mlig455_031860, Mlig455_037491, Mlig455_037492, Mlig455_038077, Mlig455_048598, Mlig455_048677, Mlig455_048710, Mlig455_049123, Mlig455_053805, Mlig455_055832, Mlig455_069771, Mlig455_069792

Neo: -

Age: Up-Down-Up

 PLS3 1.89 - - 0.956 - 0.934 -

Mlig455_011015 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.1]} {RNA1310_31558.1} {RNA815_40540}

Mlig455_016546 {REF} {Length: 959} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [Score=57.4, Expect=1e-09]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1}

Mlig455_027965 {REF} {Length: 2001} {Pfam: Calponin homology (CH) domain [PF00307.33, score=45.8]} {Human: ENSG00000102024, PLS3, plastin 3, [Score=78.2, Expect=4e-15]; ENSG00000136167, LCP1, lymphocyte cytosolic protein 1, [Score=75.1, Expect=7e-15]} {Mouse: ENSMUSG00000016382, Pls3, plastin 3 (T-isoform), [Score=78.2, Expect=3e-15]; ENSMUSG00000021998, Lcp1, lymphocyte cytosolic protein 1, [Score=74.3, Expect=5e-14]} {Dmel: FBgn0024238, Fim, Fimbrin, [Score=72.4, Expect=1e-13]} {Smed: dd_Smed_v6_1678_0_1, dd_Smed_v6_1678_0_1, [Score=83.2, Expect=2e-17]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1}

Mlig455_027966 {REF} {Length: 1665} {RNA1509_19660} {RNA1310_31558.1} {RNA815_40540}

Mlig455_031859 {REF} {Length: 2487} {RNA1509_26772} {RNA1310_30181.1} {RNA815_36710}

Mlig455_031860 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.8]} {RNA1310_31558.2} {RNA815_40540}

Mlig455_037491 {REF} {Length: 434} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=24.1]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [Score=76.3, Expect=8e-18]} {RNA1509_52826} {RNA1310_80921} {RNA815_381.1}

Mlig455_037492 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.8]} {RNA1310_31558.2} {RNA815_40540}

Mlig455_038077 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.8]} {RNA1310_31558.2} {RNA815_40540}

Mlig455_048598 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.1]} {RNA1310_31558.1} {RNA815_40540}

Mlig455_048677 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.1]} {RNA1310_31558.1} {RNA815_40540}

Mlig455_048710 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.1]} {RNA1310_31558.1} {RNA815_40540}

Mlig455_049123 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.8]} {RNA1310_31558.2} {RNA815_40540}

Mlig455_053805 {REF} {Length: 7767} {Pfam: Receptor family ligand binding region [PF01094.30, score=24.9]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=21.2]} {Smed: dd_Smed_v6_26870_0_1, dd_Smed_v6_26870_0_1, [Score=55.8, Expect=1e-08]} {RNA1509_13203} {RNA1310_267.1} {RNA815_381.1}

Mlig455_055832 {REF} {Length: 743} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=32.0]} {RNA1310_31558.2} {RNA815_40540}

Mlig455_069771 {REF} {Length: 434} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=23.2]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=75.9, Expect=1e-17]} {RNA1509_52826} {RNA1310_80921} {RNA815_381.1}

Mlig455_069792 {REF} {Length: 434} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=24.1]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=76.6, Expect=4e-18]} {RNA1509_52826} {RNA1310_80921} {RNA815_381.1}
3. MligTC455_27806 83 1.72 Mlig455_038041

Neo: -

Age: -

 MAP3K4 1.861 - - 0.952 - 0.909 - Mlig455_038041 {REF} {Length: 3811} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=157.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.5]; Ankyrin repeats (3 copies) [PF12796.9, score=71.6]; Ankyrin repeats (many copies) [PF13637.8, score=54.4]; Ankyrin repeats (many copies) [PF13857.8, score=54.3]; Ankyrin repeat [PF00023.32, score=54.2]; Ankyrin repeat [PF13606.8, score=40.3]; Fungal protein kinase [PF17667.3, score=26.7]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=132, Expect=9e-31]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=6e-31]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=128, Expect=1e-29]; ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=123, Expect=4e-29]} {Dmel: FBgn0024329, Mekk1, [Score=123, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=178, Expect=7e-47]} {Smed: dd_Smed_v6_3286_0_6, dd_Smed_v6_3286_0_6, [Score=112, Expect=3e-26]} {RNA1509_50870} {RNA1310_4206} {RNA815_5812}
4. MligTC455_34109 388 8.07 Mlig455_036207, Mlig455_060306, Mlig455_064034, Mlig455_064415

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.742

 NYNRIN 1.827 - - 0.954 - 0.873 -

Mlig455_036207 {REF} {Length: 2552} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.9]; Integrase zinc binding domain [PF17921.3, score=66.2]; Integrase core domain [PF00665.28, score=46.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.2]; H2C2 zinc finger [PF09337.12, score=26.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=243, Expect=9e-68]} {RNA1509_34066} {RNA1310_1125} {RNA815_16355}

Mlig455_060306 {REF} {Length: 3314} {Pfam: Integrase core domain [PF00665.28, score=45.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=68.6, Expect=6e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=66.6, Expect=2e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=149, Expect=1e-41]} {RNA1509_45628} {RNA1310_4631.1} {RNA815_1825.1}

Mlig455_064034 {REF} {Length: 907} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.0]; Integrase core domain [PF00665.28, score=41.0]; H2C2 zinc finger [PF09337.12, score=27.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=94.0, Expect=8e-22]} {RNA1310_90344}

Mlig455_064415 {REF} {Length: 9411} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.9]; Integrase zinc binding domain [PF17921.3, score=67.5]; Integrase core domain [PF00665.28, score=45.5]; H2C2 zinc finger [PF09337.12, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=22.7]; Retroviral aspartyl protease [PF00077.22, score=19.9]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=382, Expect=7e-119]} {RNA1509_34066} {RNA1310_1125} {RNA815_1825.1}
5. MligTC455_38597 42 0.87 Mlig455_025025

Neo: -

Age: -

 1.794 - - 0.834 - 0.960 - Mlig455_025025 {REF} {Length: 836} {NoTransDecoderORF} {RNA1509_21228} {RNA1310_9218} {RNA815_7856.3}
6. MligTC455_37329 25 0.52 Mlig455_050767

Neo: -

Age: -

 1.782 - - 0.814 - 0.968 - Mlig455_050767 {REF} {Length: 597} {NoTransDecoderORF} {RNA1509_25742, RNA1509_42914, RNA1509_59553} {RNA1310_127391, RNA1509_25742, RNA1509_42914} {RNA1509_25742, RNA1509_42914, RNA815_64986}
7. MligTC455_27815 1267 26.39 Mlig455_003681, Mlig455_007743, Mlig455_008454, Mlig455_014548, Mlig455_019559, Mlig455_023634, Mlig455_026256, Mlig455_029577, Mlig455_043741, Mlig455_070803

Neo: -

Age: logFC(26M/2M)=0.722

Regeneration-upregulated BL: 2.777

Regeneration-enriched BL: 2.777

 1.77 - - 0.973 - 0.797 -

Mlig455_003681 {REF} {Length: 907} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_007743 {REF} {Length: 185} {NoTransDecoderORF} {RNA1509_8341} {RNA1310_76950} {RNA815_2170.1}

Mlig455_008454 {REF} {Length: 175} {NoTransDecoderORF} {RNA1509_8341} {RNA1310_76950} {RNA815_2170.1}

Mlig455_014548 {REF} {Length: 352} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}

Mlig455_019559 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_023634 {REF} {Length: 1932} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40233} {RNA1310_27331} {RNA815_2170.1}

Mlig455_026256 {REF} {Length: 1373} {RNA1509_13206} {RNA1310_1311.1} {RNA815_19414}

Mlig455_029577 {REF} {Length: 431} {RNA1509_40233} {RNA1310_27331} {RNA815_2170.2}

Mlig455_043741 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_070803 {REF} {Length: 7254} {RNA1509_55315} {RNA1310_14431} {RNA815_2170.1}
8. MligTC455_28104 102 2.13 Mlig455_026681, Mlig455_026757

Neo: -

Age: -

 1.753 - - 0.985 - 0.768 -

Mlig455_026681 {REF} {Length: 1025} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_13614.1} {RNA815_15623}

Mlig455_026757 {REF} {Length: 548} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_15623}
9. MligTC455_27810 296 6.16 Mlig455_014545, Mlig455_031367

Neo: -

Age: -

 1.747 - - 0.950 - 0.797 -

Mlig455_014545 {REF} {Length: 1192} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1}

Mlig455_031367 {REF} {Length: 663} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1}
10. MligTC455_28240 51 1.05 Mlig455_067372

Neo: -

Age: -

 1.724 - - 0.972 - 0.752 - Mlig455_067372 {REF} {Length: 796} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_34613}
11. MligTC455_50538 22 0.45 Mlig455_039206

Neo: -

Age: -

 TJAP1 0.982 - - 0.982 - - - Mlig455_039206 {REF} {Length: 1276} {TRANSSPLICED} {Human: ENSG00000137221, TJAP1, tight junction associated protein 1, [RH, Score=52.4, Expect=3e-07]} {Dmel: FBgn0259224, CG42324, [RH, Score=77.8, Expect=7e-16]} {Smed: dd_Smed_v6_7904_0_1, dd_Smed_v6_7904_0_1, [RH, Score=102, Expect=1e-25]} {RNA1509_16465} {RNA1310_22523} {RNA815_12833.1}
12. MligTC455_38740 49 1.02 Mlig455_014973

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_014973 {REF} {Length: 1732} {RNA1509_14379} {RNA1310_52607} {RNA815_11562.1}
13. MligTC455_12938 45 0.94 Mlig455_006173

Neo: -

Age: -

Region-enriched R5: 3.537/0.01644

 0.975 - - - - 0.975 - Mlig455_006173 {REF} {Length: 1993} {NoTransDecoderORF} {RNA1310_87441}
14. MligTC455_00600 63 1.31 Mlig455_053978

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_053978 {REF} {Length: 1009} {Pfam: Arenavirus nucleocapsid C-terminal domain [PF17290.4, score=18.2]} {RNA1509_1755} {RNA1310_2220.1} {RNA815_703.1}
15. MligTC455_47691 103 2.14 Mlig455_046561

Neo: -

Age: -

 UBTD2 0.972 - - 0.972 - - - Mlig455_046561 {REF} {Length: 3785} {Pfam: Ubiquitin-binding domain [PF16455.7, score=121.7]; Ubiquitin family [PF00240.25, score=33.5]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=218, Expect=9e-71]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=219, Expect=2e-71]} {Dmel: FBgn0264712, CG1172, [RH, Score=194, Expect=2e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=198, Expect=4e-63]} {RNA1509_42408} {RNA1310_33971} {RNA815_34971}
16. MligTC455_46481 1143 23.81 Mlig455_030245

Neo: -

Age: logFC(26M/2M)=-0.408

 0.97 - - - - 0.970 - Mlig455_030245 {REF} {Length: 1621} {RNA1509_6872} {RNA1310_19869.1} {RNA815_8634}
17. MligTC455_38739 39 0.81 Mlig455_014528

Neo: -

Age: -

 0.966 - - 0.966 - - - Mlig455_014528 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_13586} {RNA1310_52607} {RNA815_2048.1}
18. MligTC455_11497 60 1.24 Mlig455_038567

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_038567 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_23145} {RNA815_41033.2}
19. MligTC455_38927 20 0.43 Mlig455_036669, Mlig455_046975

Neo: -

Age: -

Region-enriched R4: 5.723/0.01223

 0.965 - - 0.965 - - -

Mlig455_036669 {REF} {Length: 606} {RNA1509_25556} {RNA1310_73151} {RNA815_48752}

Mlig455_046975 {REF} {Length: 534} {TRANSSPLICED} {RNA1509_25556} {RNA1310_73151} {RNA815_48752}
20. MligTC455_08607 56 1.17 Mlig455_044643

Neo: -

Age: -

 B3GALT5 0.964 - - - - 0.964 - Mlig455_044643 {REF} {Length: 2468} {Pfam: Galactosyltransferase [PF01762.23, score=99.2]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [Score=90.1, Expect=9e-20]; ENSG00000237172, B3GNT9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, [Score=89.7, Expect=3e-19]; ENSG00000156966, B3GNT7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=89.0, Expect=5e-19]} {Mouse: ENSMUSG00000069920, B3gnt9, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, [Score=87.4, Expect=1e-18]; ENSMUSG00000079445, B3gnt7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=87.0, Expect=2e-18]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [Score=86.3, Expect=1e-18]; ENSMUSG00000033849, B3galt2, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2, [Score=83.2, Expect=3e-17]} {Dmel: FBgn0000221, brn, brainiac, [Score=100, Expect=1e-23]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=66.6, Expect=4e-12]} {Smed: dd_Smed_v6_9789_0_1, dd_Smed_v6_9789_0_1, [Score=100, Expect=8e-24]} {RNA1509_9817} {RNA1310_37269} {RNA815_21699}
21. MligTC455_43131 121 2.51 Mlig455_042022

Neo: -

Age: Down-Down-Up

 ANK1 0.963 - - - - 0.963 - Mlig455_042022 {REF} {Length: 2609} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.5]; Ankyrin repeats (many copies) [PF13857.8, score=57.9]; Ankyrin repeats (many copies) [PF13637.8, score=55.3]; Ankyrin repeat [PF13606.8, score=44.4]; Ankyrin repeat [PF00023.32, score=40.3]; SOCS box [PF07525.18, score=31.4]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=67.0, Expect=2e-11]; ENSG00000145362, ANK2, ankyrin 2, [Score=66.2, Expect=3e-11]; ENSG00000151150, ANK3, ankyrin 3, [Score=64.7, Expect=1e-10]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=67.4, Expect=1e-11]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=64.7, Expect=1e-10]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=64.3, Expect=7e-11]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=57.8, Expect=6e-09]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=61.2, Expect=4e-10]} {RNA1509_37297} {RNA1310_14378} {RNA815_6651}
22. MligTC455_27807 141 2.93 Mlig455_019560

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.009

 0.962 - - - - 0.962 - Mlig455_019560 {REF} {Length: 3424} {Pfam: Poxvirus A32 protein [PF04665.14, score=30.3]} {Celegans: WBGene00021498, Y40C7B.1, [RH, Score=66.2, Expect=3e-12]} {RNA1509_5514} {RNA1310_683.1} {RNA815_1542.1}
23. MligTC455_28108 147 3.07 Mlig455_049966, Mlig455_051247

Neo: -

Age: -

 0.961 - - 0.961 - - -

Mlig455_049966 {REF} {Length: 1643} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_14078} {RNA815_15623}

Mlig455_051247 {REF} {Length: 862} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_15623}
24. MligTC455_06476 12 0.25 Mlig455_039354

Neo: -

Age: -

 ANGPT4 0.96 - - - - 0.960 - Mlig455_039354 {REF} {Length: 1908} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=74.4]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=67.8, Expect=2e-12]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=67.8, Expect=8e-13]} {Dmel: FBgn0087011, CG41520, [Score=57.0, Expect=4e-09]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=63.2, Expect=2e-11]}
25. MligTC455_45953 19 0.4 Mlig455_052538

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_052538 {REF} {Length: 308} {NoTransDecoderORF} {RNA1310_34356} {RNA815_20864}
26. MligTC455_27803 96 1.99 Mlig455_000283

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_000283 {REF} {Length: 3407} {RNA1509_13206} {RNA1310_1311.1} {RNA815_19414}
27. MligTC455_16964 15 0.31 Mlig455_038846

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_038846 {REF} {Length: 598} {NoTransDecoderORF} {RNA1310_139317} {RNA815_31479}
28. MligTC455_39554 23 0.48 Mlig455_004604

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_004604 {REF} {Length: 1493} {RNA1509_16090} {RNA1310_14332} {RNA815_62378}
29. MligTC455_17241 51 1.06 Mlig455_031641

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_031641 {REF} {Length: 1430} {NoTransDecoderORF} {RNA1509_31207} {RNA815_58763}
30. MligTC455_30268 108 2.25 Mlig455_026672

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_026672 {REF} {Length: 4320} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=29.9]; Endonuclease-reverse transcriptase [PF14529.8, score=26.1]; PHD-finger [PF00628.31, score=24.9]} {RNA1509_5039} {RNA1310_554.1} {RNA815_3500.1}
31. MligTC455_43130 122 2.54 Mlig455_041944

Neo: -

Age: -

 ANK1 0.957 - - - - 0.957 - Mlig455_041944 {REF} {Length: 2473} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=58.6]; Ankyrin repeats (many copies) [PF13857.8, score=56.6]; Ankyrin repeats (many copies) [PF13637.8, score=53.6]; Ankyrin repeat [PF13606.8, score=41.5]; Ankyrin repeat [PF00023.32, score=39.2]; SOCS box [PF07525.18, score=31.9]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=67.4, Expect=6e-11]; ENSG00000145362, ANK2, ankyrin 2, [Score=65.1, Expect=2e-10]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=67.8, Expect=2e-11]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=63.2, Expect=5e-10]} {Celegans: WBGene00021304, nphp-2, NePHronoPhthisis (Human kidney disease) homolog, [Score=57.8, Expect=2e-08]} {Smed: dd_Smed_v6_2072_0_18, dd_Smed_v6_2072_0_18, [Score=61.6, Expect=7e-10]} {RNA1509_22572, RNA1509_37297} {RNA1310_14378, RNA1509_22572, RNA1509_37297} {RNA1509_22572, RNA1509_37297, RNA815_6651}
32. MligTC455_02758 129 2.69 Mlig455_001648, Mlig455_001715

Neo: -

Age: logFC(26M/2M)=-0.349

 0.955 - - 0.955 - - -

Mlig455_001648 {REF} {Length: 2010} {Pfam: Death domain [PF00531.24, score=20.4]} {RNA1509_32212, RNA1509_57415} {RNA1310_29260, RNA1509_32212, RNA1509_57415} {RNA1509_32212, RNA1509_57415, RNA815_17490}

Mlig455_001715 {REF} {Length: 1221} {RNA1509_32212} {RNA1310_56586} {RNA815_40737.1}
33. MligTC455_26956 524 10.91 Mlig455_007984

Neo: -

Age: Down-Up-Up

 0.955 - - - - 0.955 - Mlig455_007984 {REF} {Length: 1388} {RNA1509_52323} {RNA1310_12387.2} {RNA815_14587}
34. MligTC455_48066 328 6.84 Mlig455_036125, Mlig455_036160

Neo: -

Age: -

Region-enriched R2: 2.674/0.01484

 0.955 - - - - 0.955 -

Mlig455_036125 {REF} {Length: 1205} {NoTransDecoderORF} {RNA1509_25368} {RNA1310_58162} {RNA815_17371}

Mlig455_036160 {REF} {Length: 2487} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=204.5]; Sulfotransferase family [PF13469.8, score=22.2]} {Smed: dd_Smed_v6_5024_0_1, dd_Smed_v6_5024_0_1, [Score=168, Expect=2e-51]} {RNA1509_29042} {RNA1310_28759.2} {RNA815_17371}
35. MligTC455_20056 31 0.64 Mlig455_031637

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_031637 {REF} {Length: 993} {NoTransDecoderORF}
36. MligTC455_29983 94 1.95 Mlig455_037901

Neo: -

Age: Down-Up-Down

 0.954 - - - - 0.954 - Mlig455_037901 {REF} {Length: 2356} {Pfam: Mab-21 protein [PF03281.16, score=27.2]} {RNA1509_59266} {RNA1310_36780} {RNA815_5358.1}
37. MligTC455_30269 148 3.09 Mlig455_050984

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_050984 {REF} {Length: 3262} {Dmel: FBgn0036278, CrzR, Corazonin receptor, [Score=55.5, Expect=1e-09]} {RNA1509_5039} {RNA1310_3442.1} {RNA815_3500.1}
38. MligTC455_35351 57 1.19 Mlig455_065460

Neo: -

Age: -

 AF241726.2 0.954 - - - - 0.954 - Mlig455_065460 {REF} {Length: 1961} {Pfam: Tetraspanin family [PF00335.22, score=78.8]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=54.7, Expect=8e-08]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=52.4, Expect=3e-07]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_3116_0_1, dd_Smed_v6_3116_0_1, [Score=87.8, Expect=1e-19]} {RNA1509_60052} {RNA1310_15363} {RNA815_5523}
39. MligTC455_51796 22 0.47 Mlig455_023049

Neo: -

Age: Up-Down-Down

 0.953 - - - - 0.953 - Mlig455_023049 {REF} {Length: 5192} {RNA1509_51131} {RNA1310_28552.1, RNA1509_51131} {RNA1509_51131, RNA815_11097}
40. MligTC455_14328 585 12.19 Mlig455_035956, Mlig455_058425

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=3.032

Region-enriched R2: 6.210/0.01234
Region-enriched R3: 5.834/0.00211

 CYP2U1 0.952 - - - - 0.952 -

Mlig455_035956 {REF} {Length: 4315} {Pfam: Cytochrome P450 [PF00067.24, score=301.9]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=213, Expect=5e-62]; ENSG00000108242, CYP2C18, cytochrome P450 family 2 subfamily C member 18, [Score=205, Expect=9e-60]} {Mouse: ENSMUSG00000032808, Cyp2c38, cytochrome P450, family 2, subfamily c, polypeptide 38, [Score=215, Expect=9e-64]; ENSMUSG00000025003, Cyp2c39, cytochrome P450, family 2, subfamily c, polypeptide 39, [Score=214, Expect=3e-63]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=213, Expect=2e-62]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=213, Expect=2e-62]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=212, Expect=2e-62]; ENSMUSG00000052974, Cyp2f2, cytochrome P450, family 2, subfamily f, polypeptide 2, [Score=208, Expect=5e-61]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=179, Expect=5e-50]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=206, Expect=3e-60]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=226, Expect=7e-68]} {RNA1509_49553} {RNA1310_2911.1} {RNA815_12179}

Mlig455_058425 {REF} {Length: 2850} {Pfam: Cytochrome P450 [PF00067.24, score=301.9]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=213, Expect=5e-62]; ENSG00000108242, CYP2C18, cytochrome P450 family 2 subfamily C member 18, [Score=205, Expect=9e-60]} {Mouse: ENSMUSG00000032808, Cyp2c38, cytochrome P450, family 2, subfamily c, polypeptide 38, [Score=215, Expect=9e-64]; ENSMUSG00000025003, Cyp2c39, cytochrome P450, family 2, subfamily c, polypeptide 39, [Score=214, Expect=3e-63]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=213, Expect=2e-62]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=213, Expect=2e-62]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=212, Expect=2e-62]; ENSMUSG00000052974, Cyp2f2, cytochrome P450, family 2, subfamily f, polypeptide 2, [Score=208, Expect=5e-61]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=179, Expect=5e-50]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=206, Expect=3e-60]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=226, Expect=7e-68]} {RNA1509_49553} {RNA1310_2911.1, RNA1509_49553} {RNA1509_49553, RNA815_12179}
41. MligTC455_21597 35 0.72 Mlig455_019890

Neo: Germline

Age: -

 0.952 - - - - 0.952 - Mlig455_019890 {REF} {Length: 744} {NoTransDecoderORF} {RNA1310_5686} {RNA815_28184}
42. MligTC455_27392 69 1.44 Mlig455_025611

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_025611 {REF} {Length: 1130} {NoTransDecoderORF} {RNA1509_53194} {RNA1310_47725} {RNA815_22886.1}
43. MligTC455_28898 438 9.12 Mlig455_007410, Mlig455_013718, Mlig455_023882, Mlig455_031815, Mlig455_047666, Mlig455_048592

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_007410 {REF} {Length: 379} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_013718 {REF} {Length: 306} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_023882 {REF} {Length: 222} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_18744} {RNA815_63603}

Mlig455_031815 {REF} {Length: 445} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_4007.1} {RNA815_63603}

Mlig455_047666 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_10113} {RNA1310_4007.1} {RNA815_63603}

Mlig455_048592 {REF} {Length: 2146} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.2]} {RNA1509_10113} {RNA1310_4007.1} {RNA815_5184.1}
44. MligTC455_31902 293 6.11 Mlig455_022360

Neo: -

Age: -

Region-enriched R2: 3.717/0.04491

 WSCD2 0.951 - - - - 0.951 - Mlig455_022360 {REF} {Length: 5720} {Pfam: WSC domain [PF01822.21, score=54.8]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=48.1, Expect=5e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=48.5, Expect=2e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.6, Expect=1e-07]} {RNA1509_31473} {RNA1310_51110.1} {RNA815_20842.1}
45. MligTC455_35325 26 0.54 Mlig455_008452, Mlig455_031353, Mlig455_056519

Neo: -

Age: -

 HTR3A 0.951 - - 0.951 - - -

Mlig455_008452 {REF} {Length: 1552} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=81.9]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=26.8]} {Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=97.4, Expect=2e-22]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=92.8, Expect=1e-20]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=92.8, Expect=6e-21]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=91.7, Expect=2e-20]; ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=90.9, Expect=3e-20]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=93.2, Expect=4e-21]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=98.2, Expect=6e-23]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [Score=88.6, Expect=9e-20]} {RNA1509_7752} {RNA1310_93708} {RNA815_49010}

Mlig455_031353 {REF} {Length: 1802} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=61.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=54.4]} {Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=103, Expect=5e-25]; ENSG00000149305, HTR3B, 5-hydroxytryptamine receptor 3B, [Score=101, Expect=1e-24]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=100, Expect=4e-24]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=98.2, Expect=2e-23]; ENSMUSG00000008590, Htr3b, 5-hydroxytryptamine (serotonin) receptor 3B, [Score=96.3, Expect=7e-23]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=93.6, Expect=6e-22]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=100, Expect=1e-24]} {Smed: dd_Smed_v6_11955_0_1, dd_Smed_v6_11955_0_1, [Score=90.5, Expect=5e-21]} {RNA1509_7752} {RNA1310_93708} {RNA815_49010}

Mlig455_056519 {REF} {Length: 1867} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=81.9]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=26.8]} {Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=97.4, Expect=2e-22]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=92.8, Expect=1e-20]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=92.8, Expect=6e-21]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=91.7, Expect=2e-20]; ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=90.9, Expect=3e-20]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=93.2, Expect=4e-21]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=98.2, Expect=6e-23]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [Score=88.6, Expect=9e-20]} {RNA1509_53098} {RNA1310_93708} {RNA815_49010}
46. MligTC455_36869 69 1.45 Mlig455_037726

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_037726 {REF} {Length: 3927} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_10807.1, RNA1509_32637} {RNA1509_32637, RNA815_15623}
47. MligTC455_42789 51 1.05 Mlig455_049242

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_049242 {REF} {Length: 2156} {NoTransDecoderORF} {RNA1509_49659} {RNA1310_121980} {RNA815_13521.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA