Data search
Results for MligTC455_28943
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28943 | 106 | 2.20 | Mlig455_024566 | Neo: Int S/G2/M Age: Down-Up-Down |
Mlig455_024566 {REF} {Length: 6089} {TRANSSPLICED} {RNA1509_14315} {RNA1310_1783, RNA1509_14315} {RNA1509_14315, RNA815_29572} |
Cumulative graph for MligTC455_28943
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.626 | 1.997 | 0.99990 | 1.00000 | |
| RegionR2 | 3.217 | 1.997 | 0.02442 | 0.17422 | |
| RegionR3 | 1.24 | 1.997 | 0.26262 | 0.80710 | |
| RegionR4 | -1.076 | 1.997 | 0.93828 | 1.00000 | |
| RegionR5 | 2.266 | 1.997 | 0.02030 | 0.09819 | |
| RegionR6 | 2.643 | 1.997 | 0.01344 | 0.20146 | |
| RegionR7 | -4.006 | 1.997 | 0.99952 | 1.00000 | |
| RegionR8 | 3.342 | 1.997 | 0.01556 | 0.24314 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.063 | 1.997 | 0.99980 | 1.00000 | |
| RegenerationR2 | 2.67 | 1.997 | 0.00630 | 0.12708 | |
| RegenerationR3 | 3.315 | 1.997 | 0.00443 | 0.11999 | |
| RegenerationR4 | 1.8 | 1.997 | 0.13474 | 0.55377 | |
| RegenerationR5 | 1.549 | 1.997 | 0.06430 | 0.40004 | |
| RegenerationR6 | 1.759 | 1.997 | 0.09206 | 0.37754 | |
| RegenerationBL | 3.205 | 1.997 | 0.05295 | 0.26581 | |
| RegenerationTP | 4.81 | 1.997 | 0.00419 | 0.10746 |
Genes with expression patterns similar to MligTC455_28943
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28943 | 106 | 2.2 | Mlig455_024566 | Neo: Int S/G2/M Age: Down-Up-Down |
5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_024566 {REF} {Length: 6089} {TRANSSPLICED} {RNA1509_14315} {RNA1310_1783, RNA1509_14315} {RNA1509_14315, RNA815_29572} | |
| 2. | MligTC455_33060 | 100 | 2.08 | Mlig455_045901 | Neo: Germline Age: Up-Down-Up Region-enriched R5: 3.781/0.00002 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_045901 {REF} {Length: 2137} {Pfam: Immunoglobulin domain [PF13927.8, score=49.5]; Immunoglobulin domain [PF13895.8, score=47.1]; Immunoglobulin I-set domain [PF07679.18, score=41.6]; Immunoglobulin V-set domain [PF07686.19, score=29.8]; Immunoglobulin domain [PF00047.27, score=27.2]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=53.1, Expect=7e-07]} {Smed: dd_Smed_v6_2673_0_1, dd_Smed_v6_2673_0_1, [Score=50.4, Expect=3e-06]} {RNA1509_12903} {RNA1310_11861, RNA1509_12903} {RNA1509_12903, RNA815_4505} | |
| 3. | MligTC455_19336 | 106 | 2.22 | Mlig455_043985 | Neo: - |
ANKRD60 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_043985 {REF} {Length: 2392} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=55.8]; Ankyrin repeats (3 copies) [PF12796.9, score=49.1]; Ankyrin repeats (many copies) [PF13857.8, score=48.9]; Ankyrin repeat [PF00023.32, score=47.3]; Ankyrin repeat [PF13606.8, score=44.5]} {Human: ENSG00000124227, ANKRD60, ankyrin repeat domain 60, [Score=84.0, Expect=1e-18]} {Mouse: ENSMUSG00000027517, Ankrd60, ankyrin repeat domain 60, [Score=83.6, Expect=7e-19]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=70.1, Expect=7e-14]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=57.4, Expect=1e-09]} {Smed: dd_Smed_v6_8330_0_1, dd_Smed_v6_8330_0_1, [Score=177, Expect=8e-54]} {RNA1509_32608} {RNA1310_9165} {RNA815_3110} |
| 4. | MligTC455_25048 | 94 | 1.96 | Mlig455_041230 | Neo: - Age: - Region-enriched R5: 2.308/0.04470 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_041230 {REF} {Length: 530} {NoTransDecoderORF} {RNA1310_63225} {RNA815_30268} | |
| 5. | MligTC455_23517 | 847 | 17.64 | Mlig455_027857 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.877 Region-enriched R8: 5.900/0.00000 |
TLL1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_027857 {REF} {Length: 1443} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=138.1]} {Human: ENSG00000038295, TLL1, tolloid like 1, [Score=95.9, Expect=7e-22]} {Mouse: ENSMUSG00000053626, Tll1, tolloid-like, [Score=94.7, Expect=4e-21]} {Dmel: FBgn0037395, CG10280, [Score=102, Expect=1e-24]} {Celegans: WBGene00003534, nas-15, Zinc metalloproteinase nas-15, [Score=119, Expect=6e-30]} {Smed: dd_Smed_v6_345_0_1, dd_Smed_v6_345_0_1, [RH, Score=124, Expect=7e-34]} {RNA1509_35571} {RNA1310_3360.1} {RNA815_11450} |
| 6. | MligTC455_21143 | 296 | 6.18 | Mlig455_016004 | Neo: - Age: logFC(26M/2M)=-0.497 Regeneration-downregulated R6: -2.391 Regeneration-depleted R6: -2.391 |
WNT5A | 0.954 | - | - | - | - | 0.954 | - | Mlig455_016004 {REF} {Length: 3460} {Pfam: wnt family [PF00110.21, score=323.9]} {Human: ENSG00000114251, WNT5A, Wnt family member 5A, [RH, Score=282, Expect=7e-92]; ENSG00000111186, WNT5B, Wnt family member 5B, [RH, Score=280, Expect=4e-91]} {Mouse: ENSMUSG00000021994, Wnt5a, wingless-type MMTV integration site family, member 5A, [RH, Score=283, Expect=1e-92]; ENSMUSG00000030170, Wnt5b, wingless-type MMTV integration site family, member 5B, [RH, Score=277, Expect=4e-90]} {Dmel: FBgn0004360, Wnt2, Wnt oncogene analog 2, [RH, Score=201, Expect=7e-61]} {Celegans: WBGene00000858, cwn-2, [RH, Score=249, Expect=9e-80]} {Smed: dd_Smed_v6_15469_0_1, dd_Smed_v6_15469_0_1, [RH, Score=283, Expect=1e-92]} {RNA1509_15617, RNA1509_43347} {RNA1310_6635.1, RNA1509_15617, RNA1509_43347} {RNA1509_15617, RNA1509_43347, RNA815_13704} |
| 7. | MligTC455_16483 | 151 | 3.14 | Mlig455_004968 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-1.027 Region-enriched R4: 2.423/0.02120 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_004968 {REF} {Length: 3106} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=25.4]} {Celegans: WBGene00019616, nmur-2, NMUR (NeuroMedin U Receptor) homolog, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_6153_0_1, dd_Smed_v6_6153_0_1, [Score=92.0, Expect=1e-20]} {RNA1509_19863} {RNA1310_10105.1} {RNA815_12791.1} | |
| 8. | MligTC455_19473 | 281 | 5.84 | Mlig455_054301 | Neo: - Age: - Region-enriched R7: 3.456/0.00000 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_054301 {REF} {Length: 1587} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.4]} {RNA1310_40703} {RNA815_56404} | |
| 9. | MligTC455_47356 | 1519 | 31.65 | Mlig455_018207 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.601 Region-enriched R7: 1.519/0.03644 |
RCN1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_018207 {REF} {Length: 2295} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=68.7]; EF-hand domain pair [PF13499.8, score=60.6]; EF-hand domain [PF13405.8, score=45.6]; EF hand [PF13202.8, score=45.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.6]; EF-hand domain pair [PF13833.8, score=25.8]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [Score=168, Expect=4e-49]; ENSG00000142552, RCN3, reticulocalbin 3, [Score=167, Expect=9e-49]; ENSG00000128595, CALU, calumenin, [Score=166, Expect=3e-48]} {Mouse: ENSMUSG00000019539, Rcn3, reticulocalbin 3, EF-hand calcium binding domain, [Score=167, Expect=6e-49]; ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=167, Expect=1e-48]; ENSMUSG00000029767, Calu, calumenin, [Score=166, Expect=2e-48]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=169, Expect=9e-50]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=165, Expect=2e-48]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=182, Expect=3e-55]} {RNA1509_12383, RNA1509_43918, RNA1509_5096} {RNA1310_2693.1, RNA1509_43918, RNA1509_5096} {RNA1509_43918, RNA1509_5096, RNA815_747.1} |
| 10. | MligTC455_26403 | 211 | 4.39 | Mlig455_042094 | Neo: - Age: Down-Down-Up |
0.951 | - | - | - | 0.951 | - | - | Mlig455_042094 {REF} {Length: 2243} {TRANSSPLICED} {RNA1509_47973} {RNA1310_48875} {RNA815_24752} | |
| 11. | MligTC455_21386 | 20 | 0.41 | Mlig455_004837 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_004837 {REF} {Length: 1232} {TRANSSPLICED} {RNA1509_55729} {RNA1310_30927} {RNA815_14344} |
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