Data search
Results for MligTC455_25048
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25048 | 94 | 1.96 | Mlig455_041230 | Neo: - Age: - Region-enriched R5: 2.308/0.04470 |
Mlig455_041230 {REF} {Length: 530} {NoTransDecoderORF} {RNA1310_63225} {RNA815_30268} |
Cumulative graph for MligTC455_25048
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.504 | 1.749 | 0.99599 | 1.00000 | |
| RegionR2 | 1.824 | 1.749 | 0.16539 | 0.50890 | |
| RegionR3 | 1.785 | 1.749 | 0.07804 | 0.49447 | |
| RegionR4 | 0.1 | 1.749 | 0.76148 | 1.00000 | |
| RegionR5 | 2.308 | 1.749 | 0.00702 | 0.04470 | |
| RegionR6 | 1.127 | 1.749 | 0.28907 | 0.88114 | |
| RegionR7 | -0.25 | 1.749 | 0.90045 | 1.00000 | |
| RegionR8 | -5.39 | 1.749 | 0.07663 | 0.52765 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.516 | 1.749 | 0.45697 | 1.00000 | |
| RegenerationR2 | -0.197 | 1.749 | 0.82144 | 0.99544 | |
| RegenerationR3 | -0.304 | 1.749 | 0.75443 | 0.96593 | |
| RegenerationR4 | 0.189 | 1.749 | 0.86780 | 1.00000 | |
| RegenerationR5 | 0.29 | 1.749 | 0.70184 | 0.95215 | |
| RegenerationR6 | -0.016 | 1.749 | 0.97115 | 1.00000 | |
| RegenerationBL | -2.068 | 1.749 | 1.00000 | 1.00000 | |
| RegenerationTP | 3.785 | 1.749 | 0.07186 | 0.43006 |
Genes with expression patterns similar to MligTC455_25048
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25048 | 94 | 1.96 | Mlig455_041230 | Neo: - Age: - Region-enriched R5: 2.308/0.04470 |
5 | 1.000 | 1.000 | 1.000 | 1.000 | - | 1.000 | Mlig455_041230 {REF} {Length: 530} {NoTransDecoderORF} {RNA1310_63225} {RNA815_30268} | |
| 2. | MligTC455_25047 | 135 | 2.82 | Mlig455_041213 | Neo: - Age: - |
RNF31 | 3.567 | - | 0.981 | 0.961 | 0.779 | - | 0.846 | Mlig455_041213 {REF} {Length: 3533} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=39.2]; E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=27.3]; Domain of unknown function (DUF4573) [PF15140.8, score=21.0]} {Human: ENSG00000285152, RNF31, ring finger protein 31, [Score=188, Expect=2e-49]; ENSG00000092098, RNF31, ring finger protein 31, [Score=188, Expect=2e-49]; ENSG00000284845, AL136295.10, novel transcript, [Score=185, Expect=3e-50]; ENSG00000259529, AL136295.5, novel transcript, [Score=185, Expect=3e-50]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=184, Expect=3e-48]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=171, Expect=7e-44]} {Smed: dd_Smed_v6_4074_0_1, dd_Smed_v6_4074_0_1, [RH, Score=134, Expect=1e-32]} {RNA1509_18940} {RNA1310_17723.1} {RNA815_23151} |
| 3. | MligTC455_25046 | 61 | 1.27 | Mlig455_039916 | Neo: - Age: - Region-enriched R5: 2.995/0.01907 |
2.814 | 0.824 | - | 1.000 | - | - | 0.990 | Mlig455_039916 {REF} {Length: 1732} {RNA1509_55761} {RNA1310_38048} {RNA815_50613} | |
| 4. | MligTC455_45266 | 627 | 13.07 | Mlig455_002174, Mlig455_002275, Mlig455_002319 | Neo: - Age: - Region-enriched R5: 1.135/0.02910 |
RHBDF1 | 1.737 | - | - | 0.781 | - | - | 0.956 | Mlig455_002174 {REF} {Length: 3658} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=65.8]} {Human: ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [Score=316, Expect=1e-94]; ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [Score=304, Expect=2e-90]} {Mouse: ENSMUSG00000020282, Rhbdf1, rhomboid 5 homolog 1, [Score=317, Expect=3e-95]; ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [Score=303, Expect=3e-90]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [Score=293, Expect=4e-84]} {Celegans: WBGene00004402, rom-3, RhOMboid (Drosophila) related, [Score=262, Expect=2e-75]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [Score=355, Expect=3e-111]} {RNA1509_34916} {RNA1310_6258} {RNA815_6719} Mlig455_002275 {REF} {Length: 4384} {Pfam: Rhomboid family [PF01694.24, score=65.9]} {Human: ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [Score=316, Expect=7e-95]; ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [Score=303, Expect=3e-90]} {Mouse: ENSMUSG00000020282, Rhbdf1, rhomboid 5 homolog 1, [Score=317, Expect=3e-95]; ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [Score=302, Expect=4e-90]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [Score=293, Expect=4e-84]} {Celegans: WBGene00004402, rom-3, RhOMboid (Drosophila) related, [Score=255, Expect=1e-75]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [Score=355, Expect=2e-111]} {RNA1509_34916} {RNA1310_6258} {RNA815_6719} Mlig455_002319 {REF} {Length: 4391} {Pfam: Rhomboid family [PF01694.24, score=65.9]} {Human: ENSG00000007384, RHBDF1, rhomboid 5 homolog 1, [Score=315, Expect=9e-95]; ENSG00000129667, RHBDF2, rhomboid 5 homolog 2, [Score=303, Expect=2e-90]} {Mouse: ENSMUSG00000020282, Rhbdf1, rhomboid 5 homolog 1, [Score=317, Expect=3e-95]; ENSMUSG00000020806, Rhbdf2, rhomboid 5 homolog 2, [Score=302, Expect=4e-90]} {Dmel: FBgn0041723, rho-5, rhomboid-5, [Score=293, Expect=4e-84]} {Celegans: WBGene00004402, rom-3, RhOMboid (Drosophila) related, [Score=255, Expect=1e-75]} {Smed: dd_Smed_v6_11534_0_2, dd_Smed_v6_11534_0_2, [Score=355, Expect=2e-111]} {RNA1509_34916} {RNA1310_6258} {RNA815_6719} |
| 5. | MligTC455_52799 | 80 | 1.66 | Mlig455_031263 | Neo: - Age: - |
0.979 | - | - | 0.979 | - | - | - | Mlig455_031263 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: Yippee zinc-binding/DNA-binding /Mis18, centromere assembly [PF03226.16, score=19.0]} {Celegans: WBGene00011139, R08B4.3, [RH, Score=67.4, Expect=2e-14]} {RNA1509_40856, RNA1509_47857} {RNA1310_46338, RNA1509_40856} {RNA1509_40856, RNA815_34349} | |
| 6. | MligTC455_37168 | 752 | 15.67 | Mlig455_032391 | Neo: - Age: Up-Down-Up Region-enriched R5: 1.708/0.00065 Regeneration-upregulated BL: 2.288 Regeneration-enriched BL: 2.288 |
CIC | 0.972 | - | - | - | - | - | 0.972 | Mlig455_032391 {REF} {Length: 2915} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4819) [PF16090.7, score=43.4]} {Human: ENSG00000079432, CIC, capicua transcriptional repressor, [RH, Score=108, Expect=1e-23]} {Mouse: ENSMUSG00000005442, Cic, capicua transcriptional repressor, [RH, Score=105, Expect=1e-22]} {Dmel: FBgn0262582, cic, capicua, [Score=90.5, Expect=3e-18]} {Celegans: WBGene00001560, gei-3, GEX Interacting protein, [RH, Score=103, Expect=2e-22]} {Smed: dd_Smed_v6_4601_0_1, dd_Smed_v6_4601_0_1, [RH, Score=101, Expect=8e-22]} {RNA1509_30705} {RNA1310_5821, RNA1509_30705} {RNA1509_30705, RNA815_6450} |
| 7. | MligTC455_15962 | 394 | 8.22 | Mlig455_016102 | Neo: Irradiation Age: - Region-enriched R5: 1.799/0.00090 |
MIB2 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_016102 {REF} {Length: 4719} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=169.0]; Mib_herc2 [PF06701.15, score=160.9]; Ankyrin repeats (many copies) [PF13637.8, score=122.9]; Ankyrin repeats (many copies) [PF13857.8, score=111.6]; Ankyrin repeat [PF00023.32, score=102.2]; Ankyrin repeat [PF13606.8, score=86.2]; Mind bomb SH3 repeat domain [PF18346.3, score=81.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=60.4]; Zinc finger, ZZ type [PF00569.19, score=22.2]} {Human: ENSG00000197530, MIB2, mindbomb E3 ubiquitin protein ligase 2, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000029060, Mib2, mindbomb E3 ubiquitin protein ligase 2, [RH, Score=493, Expect=8e-159]} {Dmel: FBgn0086442, mib2, mind bomb 2, [RH, Score=555, Expect=0.0]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=124, Expect=2e-28]} {Smed: dd_Smed_v6_6104_0_2, dd_Smed_v6_6104_0_2, [Score=275, Expect=1e-76]} {RNA1509_12439} {RNA1310_3959.1, RNA1509_12439} {RNA1509_12439, RNA815_13244} |
| 8. | MligTC455_23519 | 291 | 6.06 | Mlig455_043085 | Neo: - Age: logFC(26M/2M)=0.337 Region-enriched R5: 1.705/0.02838 |
DOLPP1 | 0.97 | - | - | 0.970 | - | - | - | Mlig455_043085 {REF} {Length: 1650} {Pfam: PAP2 superfamily [PF01569.23, score=51.2]} {Human: ENSG00000167130, DOLPP1, dolichyldiphosphatase 1, [Score=117, Expect=6e-33]} {Mouse: ENSMUSG00000026856, Dolpp1, dolichyl pyrophosphate phosphatase 1, [RH, Score=113, Expect=1e-32]} {Smed: dd_Smed_v6_6607_0_1, dd_Smed_v6_6607_0_1, [Score=119, Expect=2e-34]} {RNA1509_22706} {RNA1310_2620} {RNA815_4895} |
| 9. | MligTC455_37773 | 356 | 7.41 | Mlig455_007672 | Neo: - Age: Down-Up-Down |
CCDC88C | 0.966 | - | - | - | - | - | 0.966 | Mlig455_007672 {REF} {Length: 3717} {Pfam: HOOK domain [PF19047.2, score=42.4]} {Human: ENSG00000015133, CCDC88C, coiled-coil domain containing 88C, [Score=83.6, Expect=9e-16]} {Mouse: ENSMUSG00000021182, Ccdc88c, coiled-coil domain containing 88C, [Score=89.0, Expect=1e-17]} {Smed: dd_Smed_v6_3591_0_1, dd_Smed_v6_3591_0_1, [Score=85.5, Expect=4e-17]} {RNA1509_24831} {RNA1310_4015.1, RNA1509_24831} {RNA1509_24831, RNA815_10694} |
| 10. | MligTC455_28943 | 106 | 2.2 | Mlig455_024566 | Neo: Int S/G2/M Age: Down-Up-Down |
0.96 | - | - | - | - | - | 0.960 | Mlig455_024566 {REF} {Length: 6089} {TRANSSPLICED} {RNA1509_14315} {RNA1310_1783, RNA1509_14315} {RNA1509_14315, RNA815_29572} | |
| 11. | MligTC455_12778 | 358 | 7.46 | Mlig455_018555, Mlig455_018575, Mlig455_019418 | Neo: - Age: - |
GPR89A, GPR89B | 0.959 | - | - | - | - | - | 0.959 | Mlig455_018555 {REF} {Length: 2903} {TRANSSPLICED} {Pfam: The Golgi pH Regulator (GPHR) Family N-terminal [PF12537.10, score=41.1]; Abscisic acid G-protein coupled receptor [PF12430.10, score=25.7]} {Human: ENSG00000117262, GPR89A, G protein-coupled receptor 89A, [Score=271, Expect=2e-87]; ENSG00000188092, GPR89B, G protein-coupled receptor 89B, [Score=271, Expect=2e-87]} {Mouse: ENSMUSG00000028096, Gpr89, G protein-coupled receptor 89, [Score=270, Expect=1e-86]} {Dmel: FBgn0033995, GPHR, Golgi pH Regulator, [Score=237, Expect=3e-74]} {Celegans: WBGene00013551, Y75B8A.16, [Score=250, Expect=2e-79]} {Smed: dd_Smed_v6_12507_0_1, dd_Smed_v6_12507_0_1, [Score=277, Expect=4e-90]} {RNA1509_38264} {RNA1310_11473.2} {RNA815_22038} Mlig455_018575 {REF} {Length: 5317} {Pfam: Abscisic acid G-protein coupled receptor [PF12430.10, score=132.3]; The Golgi pH Regulator (GPHR) Family N-terminal [PF12537.10, score=83.5]} {Human: ENSG00000117262, GPR89A, G protein-coupled receptor 89A, [RH, Score=499, Expect=5e-175]; ENSG00000188092, GPR89B, G protein-coupled receptor 89B, [RH, Score=499, Expect=5e-175]} {Mouse: ENSMUSG00000028096, Gpr89, G protein-coupled receptor 89, [RH, Score=499, Expect=6e-175]} {Dmel: FBgn0033995, GPHR, Golgi pH Regulator, [RH, Score=439, Expect=1e-151]} {Celegans: WBGene00013551, Y75B8A.16, [RH, Score=459, Expect=2e-159]} {Smed: dd_Smed_v6_12507_0_1, dd_Smed_v6_12507_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_38264} {RNA1310_11473.2} {RNA815_22038} Mlig455_019418 {REF} {Length: 3736} {TRANSSPLICED} {Pfam: Abscisic acid G-protein coupled receptor [PF12430.10, score=133.6]; The Golgi pH Regulator (GPHR) Family N-terminal [PF12537.10, score=83.5]} {Human: ENSG00000188092, GPR89B, G protein-coupled receptor 89B, [RH, Score=498, Expect=1e-174]; ENSG00000117262, GPR89A, G protein-coupled receptor 89A, [RH, Score=498, Expect=1e-174]} {Mouse: ENSMUSG00000028096, Gpr89, G protein-coupled receptor 89, [RH, Score=498, Expect=9e-175]} {Dmel: FBgn0033995, GPHR, Golgi pH Regulator, [RH, Score=439, Expect=1e-151]} {Celegans: WBGene00013551, Y75B8A.16, [RH, Score=459, Expect=3e-159]} {Smed: dd_Smed_v6_12507_0_1, dd_Smed_v6_12507_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_38264} {RNA1310_11473.2, RNA1509_38264} {RNA1509_38264, RNA815_22038} |
| 12. | MligTC455_42727 | 115 | 2.39 | Mlig455_028231 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.994/0.02137 |
VPS54 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_028231 {REF} {Length: 3695} {TRANSSPLICED} {Pfam: Vacuolar-sorting protein 54, of GARP complex [PF10475.11, score=59.7]} {Human: ENSG00000143952, VPS54, VPS54, GARP complex subunit, [Score=217, Expect=4e-58]} {Mouse: ENSMUSG00000020128, Vps54, VPS54 GARP complex subunit, [Score=214, Expect=2e-57]} {Dmel: FBgn0011232, scat, scattered, [Score=268, Expect=3e-76]} {Celegans: WBGene00006934, vps-54, Vacuolar protein sorting-associated protein 54, [RH, Score=174, Expect=2e-44]} {Smed: dd_Smed_v6_10319_0_1, dd_Smed_v6_10319_0_1, [Score=268, Expect=4e-76]} {RNA1509_9367} {RNA1310_5688.1} {RNA815_23566} |
| 13. | MligTC455_36117 | 406 | 8.45 | Mlig455_032713 | Neo: Neoblast, stringent Age: - |
POLA1 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_032713 {REF} {Length: 5929} {TRANSSPLICED} {Pfam: DNA polymerase family B [PF00136.23, score=355.1]; DNA Polymerase alpha zinc finger [PF08996.12, score=85.3]; DNA polymerase family B, exonuclease domain [PF03104.21, score=71.1]} {Human: ENSG00000101868, POLA1, DNA polymerase alpha 1, catalytic subunit, [RH, Score=760, Expect=0.0]} {Mouse: ENSMUSG00000006678, Pola1, polymerase (DNA directed), alpha 1, [RH, Score=745, Expect=0.0]} {Dmel: FBgn0259113, DNApol-alpha180, DNA polymerase alpha 180kD, [RH, Score=655, Expect=0.0]} {Celegans: WBGene00012936, pola-1, DNA polymerase, [RH, Score=575, Expect=7e-179]} {Smed: dd_Smed_v6_9168_0_1, dd_Smed_v6_9168_0_1, [RH, Score=618, Expect=0.0]} {RNA1509_10689, RNA1509_5465} {RNA1310_1287, RNA1509_10689, RNA1509_5465} {RNA1509_10689, RNA1509_5465, RNA815_2020} |
| 14. | MligTC455_43190 | 251 | 5.23 | Mlig455_062279 | Neo: - Age: logFC(26M/2M)=1.774 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_062279 {REF} {Length: 435} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_17845} {RNA1310_65602} {RNA815_45469} | |
| 15. | MligTC455_16947 | 1136 | 23.67 | Mlig455_001481 | Neo: Irradiation Age: logFC(26M/2M)=0.345 Region-enriched R5: 1.131/0.00263 |
UBE2C | 0.952 | - | - | - | - | - | 0.952 | Mlig455_001481 {REF} {Length: 2661} {TRANSSPLICED} {tRNA: Gly(CCC),pseudo, score=24.5} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=106.1]} {Human: ENSG00000175063, UBE2C, ubiquitin conjugating enzyme E2 C, [Score=132, Expect=9e-40]} {Mouse: ENSMUSG00000001403, Ube2c, ubiquitin-conjugating enzyme E2C, [Score=131, Expect=7e-40]} {Dmel: FBgn0264848, vih, vihar, [Score=125, Expect=9e-38]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=93.6, Expect=1e-25]} {Smed: dd_Smed_v6_3846_0_1, dd_Smed_v6_3846_0_1, [Score=104, Expect=5e-30]} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1310_35900.2, RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558, RNA815_23169.2} |
| 16. | MligTC455_49789 | 85 | 1.77 | Mlig455_033540 | Neo: - Age: Up-Up-Down Region-enriched R5: 3.704/0.00008 |
TRIM2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_033540 {REF} {Length: 4183} {Pfam: NHL repeat [PF01436.23, score=48.9]; Filamin/ABP280 repeat [PF00630.21, score=33.2]; SMP-30/Gluconolactonase/LRE-like region [PF08450.14, score=29.4]; RING-type zinc-finger [PF13445.8, score=26.1]; zinc-RING finger domain [PF14634.8, score=25.3]; B-box zinc finger [PF00643.26, score=21.8]; Ring finger domain [PF13639.8, score=20.8]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=152, Expect=6e-38]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=150, Expect=1e-37]} {Dmel: FBgn0031999, CG8419, [RH, Score=59.7, Expect=8e-09]} {Celegans: WBGene00003599, nhl-3, NHL (Ring finger b-box coiled coil) domain containing, [Score=304, Expect=4e-93]} {RNA1509_46302, RNA1509_58017} {RNA1310_9321, RNA1509_46302, RNA1509_58017} {RNA1509_46302, RNA1509_58017, RNA815_20657} |