M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_29054

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29054 70 1.45 Mlig455_013486

Neo: -

Age: -

 Mlig455_013486 {REF} {Length: 1916} {NoTransDecoderORF} {RNA1310_69487} {RNA815_59599}

Cumulative graph for MligTC455_29054

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.157 1.541 0.99980 1.00000
RegionR2 5.177 1.541 0.00347 0.05055
RegionR3 3.822 1.541 0.01474 0.19529
RegionR4 0.069 1.541 0.65754 0.95786
RegionR5 1.828 1.541 0.21378 0.51186
RegionR6 3.192 1.541 0.04634 0.40250
RegionR7 -2.225 1.541 1.00000 1.00000
RegionR8 -4.707 1.541 0.99975 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.426 1.541 0.99991 1.00000
RegenerationR2 -0.919 1.541 0.23283 0.68063
RegenerationR3 0.089 1.541 0.89815 1.00000
RegenerationR4 0.539 1.541 0.56695 0.89989
RegenerationR5 0.588 1.541 0.50149 0.85926
RegenerationR6 0.726 1.541 0.43537 0.76104
RegenerationBL 4.209 1.541 0.02879 0.18845
RegenerationTP 4.676 1.541 0.07106 0.42734


Genes with expression patterns similar to MligTC455_29054

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29054 70 1.45 Mlig455_013486

Neo: -

Age: -

 4 - - 1.000 1.000 1.000 1.000 Mlig455_013486 {REF} {Length: 1916} {NoTransDecoderORF} {RNA1310_69487} {RNA815_59599}
2. MligTC455_40287 116 2.41 Mlig455_043891

Neo: -

Age: logFC(26M/2M)=-0.916

Regeneration-enriched BL: 6.689
Regeneration-enriched R2: 6.021

 1.712 - - - - 0.750 0.962 Mlig455_043891 {REF} {Length: 4345} {RNA1509_22214} {RNA1310_39071, RNA1509_22214} {RNA1509_22214, RNA815_41273}
3. MligTC455_25534 310 6.46 Mlig455_000181

Neo: -

Age: logFC(26M/2M)=-0.492

 0.985 - - - - - 0.985 Mlig455_000181 {REF} {Length: 1867} {TRANSSPLICED} {Pfam: Lectin C-type domain [PF00059.23, score=32.2]} {RNA1509_57829} {RNA1310_16312, RNA1509_57829} {RNA1509_57829, RNA815_15052}
4. MligTC455_15017 54 1.13 Mlig455_023985

Neo: -

Age: logFC(26M/2M)=0.798

 PRR9 0.982 - - - 0.982 - - Mlig455_023985 {REF} {Length: 2349} {Pfam: Cysteine rich repeat [PF02363.21, score=20.3]} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=48.9, Expect=6e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=91.3, Expect=3e-20]} {RNA1509_13008, RNA1509_50480} {RNA1310_42834, RNA1509_50480} {RNA1509_50480, RNA815_37802}
5. MligTC455_52494 100 2.08 Mlig455_013751

Neo: -

Age: -

Region-enriched R6: 6.660/0.00069

 BEST4 0.981 - - - - - 0.981 Mlig455_013751 {REF} {Length: 1713} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=176.9]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=187, Expect=2e-53]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=181, Expect=2e-50]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=198, Expect=6e-56]} {Celegans: WBGene00022797, best-24, Bestrophin homolog 24, [Score=168, Expect=1e-45]} {Smed: dd_Smed_v6_22175_0_4, dd_Smed_v6_22175_0_4, [Score=295, Expect=7e-95]} {RNA1310_16906} {RNA815_14720}
6. MligTC455_00307 21 0.44 Mlig455_065049

Neo: -

Age: -

 0.979 - - - - - 0.979 Mlig455_065049 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_18025} {RNA1310_50423.1} {RNA815_44681}
7. MligTC455_08728 78 1.63 Mlig455_048047, Mlig455_048066

Neo: -

Age: -

 0.979 - - - - - 0.979

Mlig455_048047 {REF} {Length: 979} {NoTransDecoderORF}

Mlig455_048066 {REF} {Length: 704} {NoTransDecoderORF}
8. MligTC455_10907 39 0.81 Mlig455_030325

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_030325 {REF} {Length: 1588} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.2]} {RNA1310_27913} {RNA815_25050}
9. MligTC455_27591 24 0.5 Mlig455_021100

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_021100 {REF} {Length: 1478} {RNA1509_46103} {RNA1310_81900} {RNA815_8813.1}
10. MligTC455_09656 14 0.3 Mlig455_008782

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_008782 {REF} {Length: 329} {NoTransDecoderORF}
11. MligTC455_14045 44 0.93 Mlig455_014678

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_014678 {REF} {Length: 1127} {RNA1509_32807} {RNA1310_50499} {RNA815_11759.1}
12. MligTC455_13046 94 1.96 Mlig455_027003, Mlig455_043462

Neo: -

Age: -

 0.975 - - - - - 0.975

Mlig455_027003 {REF} {Length: 2071} {NoTransDecoderORF} {RNA1509_31427} {RNA1310_20953.1} {RNA815_18897.1}

Mlig455_043462 {REF} {Length: 746} {NoTransDecoderORF} {RNA1310_97651}
13. MligTC455_34858 27 0.57 Mlig455_064094

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.290

 DPYD 0.973 - - - - - 0.973 Mlig455_064094 {REF} {Length: 5732} {Pfam: Conserved region in glutamate synthase [PF01645.19, score=504.5]; Glutamate synthase central domain [PF04898.16, score=353.2]; GXGXG motif [PF01493.21, score=249.1]; Glutamine amidotransferases class-II [PF00310.23, score=203.2]; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster [PF14691.8, score=67.6]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=54.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=32.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=27.4]; FAD dependent oxidoreductase [PF01266.26, score=23.4]; HI0933-like protein [PF03486.16, score=22.3]; Thi4 family [PF01946.19, score=22.1]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=21.9]} {Human: ENSG00000188641, DPYD, dihydropyrimidine dehydrogenase, [Score=87.8, Expect=1e-16]} {Mouse: ENSMUSG00000033308, Dpyd, dihydropyrimidine dehydrogenase, [Score=86.3, Expect=3e-16]} {Dmel: FBgn0036663, CG9674, [Score=1686, Expect=0.0]} {Celegans: WBGene00012326, W07E11.1, [Score=1832, Expect=0.0]} {Smed: dd_Smed_v6_5074_0_1, dd_Smed_v6_5074_0_1, [Score=1622, Expect=0.0]} {RNA1509_10634, RNA1509_223, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495} {RNA1310_1077.1, RNA1509_10634, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495} {RNA1509_10634, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495, RNA815_141.1}
14. MligTC455_56643 11 0.23 Mlig455_002103

Neo: -

Age: -

 0.973 - - - - - 0.973 Mlig455_002103 {REF} {Length: 238} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
15. MligTC455_56644 11 0.23 Mlig455_002211

Neo: -

Age: -

 0.973 - - - - - 0.973 Mlig455_002211 {REF} {Length: 492} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
16. MligTC455_37508 108 2.26 Mlig455_010524, Mlig455_061849

Neo: -

Age: -

 0.972 - - - - - 0.972

Mlig455_010524 {REF} {Length: 589} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}

Mlig455_061849 {REF} {Length: 1216} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
17. MligTC455_40365 195 4.05 Mlig455_038370

Neo: -

Age: Down-Up-Down

Region-enriched R2: 3.989/0.00156

 0.972 - - - - - 0.972 Mlig455_038370 {REF} {Length: 3062} {RNA1509_57598} {RNA1310_48414, RNA1509_57598} {RNA1509_57598, RNA815_41099}
18. MligTC455_01552 71 1.47 Mlig455_038980

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_038980 {REF} {Length: 991}
19. MligTC455_32661 38 0.78 Mlig455_068427

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_068427 {REF} {Length: 5227} {NoTransDecoderORF} {RNA1509_26128} {RNA1310_7005.1} {RNA815_8730.1}
20. MligTC455_28329 89 1.86 Mlig455_031656

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_031656 {REF} {Length: 3392} {Pfam: Integrase core domain [PF00665.28, score=30.9]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=63.5, Expect=9e-13]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
21. MligTC455_16895 508 10.58 Mlig455_020558, Mlig455_044511

Neo: -

Age: Up-Down-Down

Region-enriched R8: 4.020/0.00009
Region-enriched R7: 2.782/0.03064

 FAT4 0.969 - - - - - 0.969

Mlig455_020558 {REF} {Length: 15261} {Pfam: Cadherin domain [PF00028.19, score=236.6]; EGF-like domain [PF00008.29, score=31.7]; Laminin G domain [PF02210.26, score=27.3]; Laminin G domain [PF00054.25, score=27.1]; Long Rib domain [PF18957.2, score=19.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=523, Expect=9e-151]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=509, Expect=1e-146]} {Dmel: FBgn0001075, ft, fat, [Score=503, Expect=2e-144]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=234, Expect=2e-61]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [Score=298, Expect=7e-81]} {RNA1509_19257} {RNA1310_36936, RNA1509_19257} {RNA1509_19257, RNA815_35431}

Mlig455_044511 {REF} {Length: 14996} {Pfam: Cadherin domain [PF00028.19, score=1056.4]; Cadherin-like [PF16184.7, score=66.3]; Cadherin-like [PF08266.14, score=54.7]; EGF-like domain [PF00008.29, score=28.9]; Long Rib domain [PF18957.2, score=27.4]; Cadherin prodomain like [PF08758.13, score=26.9]; Laminin G domain [PF00054.25, score=22.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=1341, Expect=0.0]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=1291, Expect=0.0]} {Dmel: FBgn0001075, ft, fat, [Score=726, Expect=0.0]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=303, Expect=2e-81]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [Score=280, Expect=1e-74]} {RNA1509_19257, RNA1509_53071} {RNA1310_36936, RNA1509_53071} {RNA1509_53071, RNA815_35431}
22. MligTC455_49969 23 0.48 Mlig455_006042

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_006042 {REF} {Length: 2204} {Pfam: F5/8 type C domain [PF00754.27, score=21.8]} {RNA1509_25922} {RNA1310_32867} {RNA815_55792}
23. MligTC455_39858 79 1.66 Mlig455_038520

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.278

 NECAB1 0.966 - - - - - 0.966 Mlig455_038520 {REF} {Length: 1812} {Pfam: EF-hand domain [PF13405.8, score=35.3]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.7]; EF-hand domain pair [PF13833.8, score=27.4]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=26.7]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=187, Expect=2e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=181, Expect=2e-53]} {RNA1310_5770} {RNA815_27367}
24. MligTC455_51628 96 2.01 Mlig455_004880, Mlig455_047262

Neo: -

Age: -

Region-enriched R2: 7.137/0.00371

 0.966 - - - - - 0.966

Mlig455_004880 {REF} {Length: 548} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_75098} {RNA815_1171.1}

Mlig455_047262 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_75098} {RNA815_1171.1}
25. MligTC455_00387 32 0.66 Mlig455_025051, Mlig455_025067

Neo: -

Age: -

 0.965 - - - - - 0.965

Mlig455_025051 {REF} {Length: 625} {NoTransDecoderORF}

Mlig455_025067 {REF} {Length: 1006}
26. MligTC455_15952 131 2.73 Mlig455_044303

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_044303 {REF} {Length: 1141} {NoTransDecoderORF} {RNA1509_33012} {RNA1310_1160.1} {RNA815_41842}
27. MligTC455_41882 38 0.79 Mlig455_068617

Neo: -

Age: Down-Up-Down

 FGFR1OP 0.965 - - - - - 0.965 Mlig455_068617 {REF} {Length: 3810} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=38.7]; LisH [PF16045.7, score=17.7]} {Human: ENSG00000213066, FGFR1OP, FGFR1 oncogene partner, [RH, Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000069135, Fgfr1op, Fgfr1 oncogene partner, [RH, Score=97.4, Expect=1e-21]} {Smed: dd_Smed_v6_5371_0_1, dd_Smed_v6_5371_0_1, [Score=57.4, Expect=5e-09]} {RNA1509_14615} {RNA1310_14786} {RNA815_10750}
28. MligTC455_08367 22 0.45 Mlig455_000673

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_000673 {REF} {Length: 899} {Pfam: WSC domain [PF01822.21, score=48.6]; PAN domain [PF00024.28, score=23.3]} {RNA1310_39474.2} {RNA815_33128}
29. MligTC455_57726 39 0.82 Mlig455_030142

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_030142 {REF} {Length: 234} {NoTransDecoderORF} {RNA1310_117714}
30. MligTC455_53348 35 0.73 Mlig455_015410

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_015410 {REF} {Length: 651} {NoTransDecoderORF} {RNA1509_3658} {RNA1310_99291.2} {RNA815_125.1}
31. MligTC455_41929 42 0.87 Mlig455_058092

Neo: -

Age: Down-Up-Down

 0.961 - - - - - 0.961 Mlig455_058092 {REF} {Length: 1217} {NoTransDecoderORF} {RNA1509_11856} {RNA1310_9867.2} {RNA815_18841.1}
32. MligTC455_53796 139 2.89 Mlig455_043491

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_043491 {REF} {Length: 544} {RNA1310_29537.1}
33. MligTC455_05881 14 0.29 Mlig455_048278

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_048278 {REF} {Length: 1904} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=35.4]} {RNA1310_71987} {RNA815_42817}
34. MligTC455_13403 157 3.27 Mlig455_058321

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.878/0.03174

 LARP1 0.96 - - - - - 0.960 Mlig455_058321 {REF} {Length: 2328} {Human: ENSG00000155506, LARP1, La ribonucleoprotein domain family member 1, [Score=178, Expect=6e-52]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [Score=178, Expect=5e-52]; ENSMUSG00000025762, Larp1b, La ribonucleoprotein domain family, member 1B, [Score=171, Expect=9e-54]} {Dmel: FBgn0261618, larp, La related protein, [Score=172, Expect=4e-50]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [Score=136, Expect=2e-37]} {Smed: dd_Smed_v6_2667_0_1, dd_Smed_v6_2667_0_1, [Score=170, Expect=2e-49]} {RNA1509_29509} {RNA1310_3597.2, RNA1509_29509} {RNA1509_29509, RNA815_2607}
35. MligTC455_02586 18 0.38 Mlig455_027317

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-1.626

 0.958 - - - - - 0.958 Mlig455_027317 {REF} {Length: 1429} {TRANSSPLICED} {RNA1509_15660} {RNA1310_28914} {RNA815_2791.1}
36. MligTC455_04227 22 0.45 Mlig455_061453

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_061453 {REF} {Length: 2038} {Pfam: Glycine rich protein [PF12810.9, score=24.7]} {RNA1509_28715} {RNA1310_109445}
37. MligTC455_30312 52 1.09 Mlig455_064890

Neo: -

Age: logFC(26M/2M)=-0.341

 MAP3K19 0.958 - - - - - 0.958 Mlig455_064890 {REF} {Length: 3703} {Pfam: Protein kinase domain [PF00069.27, score=186.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.8]; Ankyrin repeats (3 copies) [PF12796.9, score=63.4]; Ankyrin repeats (many copies) [PF13637.8, score=62.5]; Ankyrin repeats (many copies) [PF13857.8, score=41.8]; Ankyrin repeat [PF00023.32, score=37.4]; Ankyrin repeat [PF13606.8, score=31.0]; ABC1 atypical kinase-like domain [PF03109.18, score=28.7]; Fungal protein kinase [PF17667.3, score=27.3]; Phosphotransferase enzyme family [PF01636.25, score=20.7]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=153, Expect=8e-40]; ENSG00000072786, STK10, serine/threonine kinase 10, [Score=151, Expect=6e-38]; ENSG00000065613, SLK, STE20 like kinase, [Score=147, Expect=2e-36]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=157, Expect=2e-41]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=149, Expect=4e-38]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [Score=135, Expect=4e-33]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=140, Expect=4e-37]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
38. MligTC455_54466 24 0.5 Mlig455_005145

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_005145 {REF} {Length: 267} {RNA1310_84659}
39. MligTC455_15595 114 2.37 Mlig455_009340

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_009340 {REF} {Length: 1538} {TRANSSPLICED} {RNA1310_41965} {RNA815_27810}
40. MligTC455_41840 89 1.86 Mlig455_070879

Neo: -

Age: logFC(26M/2M)=1.973

 KCNT2 0.956 - - - - - 0.956 Mlig455_070879 {REF} {Length: 2497} {Human: ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [Score=385, Expect=1e-121]; ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=385, Expect=1e-120]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [Score=384, Expect=2e-121]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=382, Expect=1e-119]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [Score=455, Expect=5e-146]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=347, Expect=6e-108]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [Score=476, Expect=5e-156]} {RNA1509_17871} {RNA1310_1587.3} {RNA815_1330}
41. MligTC455_22712 451 9.39 Mlig455_036500, Mlig455_056387

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.479

Regeneration-upregulated BL: 3.623

Regeneration-enriched BL: 3.623

 CASZ1 0.955 - - - - - 0.955

Mlig455_036500 {REF} {Length: 3533} {Human: ENSG00000130940, CASZ1, castor zinc finger 1, [RH, Score=266, Expect=1e-73]} {Mouse: ENSMUSG00000028977, Casz1, castor zinc finger 1, [RH, Score=271, Expect=2e-75]} {Dmel: FBgn0004878, cas, castor, [RH, Score=267, Expect=3e-76]} {Smed: dd_Smed_v6_6778_0_1, dd_Smed_v6_6778_0_1, [RH, Score=478, Expect=1e-152]} {RNA1509_38584} {RNA1310_14915, RNA1509_38584} {RNA1509_38584, RNA815_45739}

Mlig455_056387 {REF} {Length: 3535} {Human: ENSG00000130940, CASZ1, castor zinc finger 1, [Score=222, Expect=5e-60]} {Mouse: ENSMUSG00000028977, Casz1, castor zinc finger 1, [Score=223, Expect=2e-60]} {Dmel: FBgn0004878, cas, castor, [Score=219, Expect=4e-61]} {Smed: dd_Smed_v6_6778_0_1, dd_Smed_v6_6778_0_1, [Score=275, Expect=4e-79]} {RNA1509_38584} {RNA1310_14915} {RNA815_45739}
42. MligTC455_56336 20 0.42 Mlig455_005736

Neo: -

Age: -

Regeneration-enriched R3: 8.275
Regeneration-enriched R4: 8.133
Regeneration-enriched R5: 7.743
Regeneration-enriched R2: 6.547

 0.955 - - - - - 0.955 Mlig455_005736 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_85720}
43. MligTC455_13080 144 2.99 Mlig455_034913

Neo: -

Age: Down-Up-Up

 0.953 - - - - - 0.953 Mlig455_034913 {REF} {Length: 3833} {Pfam: Tetraspanin family [PF00335.22, score=32.2]} {RNA1509_13981} {RNA1310_616.2} {RNA815_2054.1}
44. MligTC455_28105 262 5.46 Mlig455_038527

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_038527 {REF} {Length: 3543} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_9245.1} {RNA815_15623}
45. MligTC455_15164 23 0.47 Mlig455_057743

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_057743 {REF} {Length: 1373} {Pfam: Glycine rich protein [PF12810.9, score=25.6]} {RNA1310_45253} {RNA815_29629}
46. MligTC455_26999 330 6.88 Mlig455_037719, Mlig455_037789

Neo: -

Age: -

 RBM12B 0.951 - - - - - 0.951

Mlig455_037719 {REF} {Length: 3624} {Pfam: Mitochondrial distribution and morphology protein 10 [PF12519.10, score=19.6]} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=58.9, Expect=4e-08]} {RNA1509_40809} {RNA1310_8203} {RNA815_13132}

Mlig455_037789 {REF} {Length: 3262} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=61.2, Expect=7e-09]} {RNA1310_8203} {RNA815_13132}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA