M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_54466

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_54466 24 0.50 Mlig455_005145

Neo: -

Age: -

 Mlig455_005145 {REF} {Length: 267} {RNA1310_84659}

Cumulative graph for MligTC455_54466

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.661 0.729 0.99956 1.00000
RegionR2 3.899 0.729 0.99970 1.00000
RegionR3 0.993 0.729 1.00000 1.00000
RegionR4 -3.109 0.729 0.99942 1.00000
RegionR5 -0.217 0.729 1.00000 1.00000
RegionR6 1.021 0.729 1.00000 1.00000
RegionR7 1.16 0.729 1.00000 1.00000
RegionR8 0.914 0.729 0.99981 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.762 0.729 1.00000 1.00000
RegenerationR2 4.018 0.729 0.00901 0.15144
RegenerationR3 4.474 0.729 0.00940 0.17706
RegenerationR4 3.805 0.729 0.00785 0.13085
RegenerationR5 4.029 0.729 0.00508 0.12929
RegenerationR6 3.794 0.729 0.01492 0.15040
RegenerationBL 5.369 0.729 0.00308 0.04772
RegenerationTP 0.981 0.729 0.99980 1.00000


Genes with expression patterns similar to MligTC455_54466

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_54466 24 0.5 Mlig455_005145

Neo: -

Age: -

 2 - - - - 1.000 1.000 Mlig455_005145 {REF} {Length: 267} {RNA1310_84659}
2. MligTC455_48213 164 3.41 Mlig455_056285, Mlig455_056310

Neo: -

Age: -

Region-enriched R2: 5.079/0.00142

 1.861 - - - - 0.882 0.979

Mlig455_056285 {REF} {Length: 2259} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}

Mlig455_056310 {REF} {Length: 1953} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}
3. MligTC455_40859 58 1.2 Mlig455_009533

Neo: -

Age: -

 TRIOBP 1.763 - - - - 0.802 0.961 Mlig455_009533 {REF} {Length: 2328} {Human: ENSG00000100106, TRIOBP, TRIO and F-actin binding protein, [Score=58.2, Expect=8e-09]}
4. MligTC455_08216 34 0.7 Mlig455_009138

Neo: -

Age: -

 1.757 - - - - 0.797 0.960 Mlig455_009138 {REF} {Length: 379} {NoTransDecoderORF} {RNA1310_66482.1} {RNA815_62564}
5. MligTC455_23080 199 4.15 Mlig455_011733

Neo: -

Age: logFC(26M/2M)=-0.537

 CUBN 1.725 - - - - 0.775 0.950 Mlig455_011733 {REF} {Length: 1824} {Pfam: EGF-like domain [PF00008.29, score=38.3]; Human growth factor-like EGF [PF12661.9, score=21.2]} {Human: ENSG00000107611, CUBN, cubilin, [Score=60.8, Expect=3e-10]} {Mouse: ENSMUSG00000049252, Lrp1b, low density lipoprotein-related protein 1B (deleted in tumors), [Score=52.8, Expect=8e-08]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=51.6, Expect=2e-07]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=51.2, Expect=3e-07]} {Dmel: FBgn0259140, CG42255, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=54.3, Expect=2e-08]} {RNA1509_38266} {RNA1310_19274} {RNA815_9585.2}
6. MligTC455_39057 57 1.18 Mlig455_013966

Neo: Int S/G2/M

Age: -

 1.697 - - - - 0.742 0.955 Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321}
7. MligTC455_56598 18 0.37 Mlig455_042778

Neo: -

Age: -

 0.995 - - - - - 0.995 Mlig455_042778 {REF} {Length: 367} {NoTransDecoderORF} {RNA1310_101806.2}
8. MligTC455_40287 116 2.41 Mlig455_043891

Neo: -

Age: logFC(26M/2M)=-0.916

Regeneration-enriched BL: 6.689
Regeneration-enriched R2: 6.021

 0.994 - - - - - 0.994 Mlig455_043891 {REF} {Length: 4345} {RNA1509_22214} {RNA1310_39071, RNA1509_22214} {RNA1509_22214, RNA815_41273}
9. MligTC455_01552 71 1.47 Mlig455_038980

Neo: -

Age: -

 0.99 - - - - - 0.990 Mlig455_038980 {REF} {Length: 991}
10. MligTC455_05881 14 0.29 Mlig455_048278

Neo: -

Age: -

 0.99 - - - - - 0.990 Mlig455_048278 {REF} {Length: 1904} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=35.4]} {RNA1310_71987} {RNA815_42817}
11. MligTC455_20175 294 6.12 Mlig455_005758

Neo: -

Age: Down-Up-Down

 PLEKHD1 0.99 - - - - 0.990 - Mlig455_005758 {REF} {Length: 3388} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=46.6]} {Human: ENSG00000175985, PLEKHD1, pleckstrin homology and coiled-coil domain containing D1, [RH, Score=134, Expect=6e-34]} {Mouse: ENSMUSG00000066438, Plekhd1, pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, [RH, Score=134, Expect=6e-34]} {Smed: dd_Smed_v6_3737_0_1, dd_Smed_v6_3737_0_1, [RH, Score=175, Expect=7e-50]} {RNA1509_16240, RNA1509_17876, RNA1509_41234, RNA1509_59092} {RNA1310_12965, RNA1509_16240, RNA1509_41234, RNA1509_59092} {RNA1509_16240, RNA1509_41234, RNA1509_59092, RNA815_14309.1}
12. MligTC455_08728 78 1.63 Mlig455_048047, Mlig455_048066

Neo: -

Age: -

 0.986 - - - - - 0.986

Mlig455_048047 {REF} {Length: 979} {NoTransDecoderORF}

Mlig455_048066 {REF} {Length: 704} {NoTransDecoderORF}
13. MligTC455_14045 44 0.93 Mlig455_014678

Neo: -

Age: -

 0.986 - - - - - 0.986 Mlig455_014678 {REF} {Length: 1127} {RNA1509_32807} {RNA1310_50499} {RNA815_11759.1}
14. MligTC455_08498 26 0.55 Mlig455_053380

Neo: -

Age: -

 0.982 - - - - - 0.982 Mlig455_053380 {REF} {Length: 962} {NoTransDecoderORF} {RNA1310_91082}
15. MligTC455_22125 178 3.71 Mlig455_028579, Mlig455_028597

Neo: -

Age: -

Region-enriched R2: 5.949/0.00261

 0.982 - - - - - 0.982

Mlig455_028579 {REF} {Length: 993} {RNA1509_54214} {RNA1310_51652} {RNA815_36975}

Mlig455_028597 {REF} {Length: 962} {RNA1509_54214} {RNA1310_51652} {RNA815_36975}
16. MligTC455_34858 27 0.57 Mlig455_064094

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.290

 DPYD 0.982 - - - - - 0.982 Mlig455_064094 {REF} {Length: 5732} {Pfam: Conserved region in glutamate synthase [PF01645.19, score=504.5]; Glutamate synthase central domain [PF04898.16, score=353.2]; GXGXG motif [PF01493.21, score=249.1]; Glutamine amidotransferases class-II [PF00310.23, score=203.2]; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster [PF14691.8, score=67.6]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=54.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=32.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=27.4]; FAD dependent oxidoreductase [PF01266.26, score=23.4]; HI0933-like protein [PF03486.16, score=22.3]; Thi4 family [PF01946.19, score=22.1]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=21.9]} {Human: ENSG00000188641, DPYD, dihydropyrimidine dehydrogenase, [Score=87.8, Expect=1e-16]} {Mouse: ENSMUSG00000033308, Dpyd, dihydropyrimidine dehydrogenase, [Score=86.3, Expect=3e-16]} {Dmel: FBgn0036663, CG9674, [Score=1686, Expect=0.0]} {Celegans: WBGene00012326, W07E11.1, [Score=1832, Expect=0.0]} {Smed: dd_Smed_v6_5074_0_1, dd_Smed_v6_5074_0_1, [Score=1622, Expect=0.0]} {RNA1509_10634, RNA1509_223, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495} {RNA1310_1077.1, RNA1509_10634, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495} {RNA1509_10634, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495, RNA815_141.1}
17. MligTC455_56643 11 0.23 Mlig455_002103

Neo: -

Age: -

 0.981 - - - - - 0.981 Mlig455_002103 {REF} {Length: 238} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
18. MligTC455_56644 11 0.23 Mlig455_002211

Neo: -

Age: -

 0.981 - - - - - 0.981 Mlig455_002211 {REF} {Length: 492} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
19. MligTC455_49969 23 0.48 Mlig455_006042

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_006042 {REF} {Length: 2204} {Pfam: F5/8 type C domain [PF00754.27, score=21.8]} {RNA1509_25922} {RNA1310_32867} {RNA815_55792}
20. MligTC455_40365 195 4.05 Mlig455_038370

Neo: -

Age: Down-Up-Down

Region-enriched R2: 3.989/0.00156

 0.978 - - - - - 0.978 Mlig455_038370 {REF} {Length: 3062} {RNA1509_57598} {RNA1310_48414, RNA1509_57598} {RNA1509_57598, RNA815_41099}
21. MligTC455_27063 74 1.54 Mlig455_019209

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_019209 {REF} {Length: 481} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
22. MligTC455_27080 48 1 Mlig455_061810

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_061810 {REF} {Length: 665} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
23. MligTC455_38597 42 0.87 Mlig455_025025

Neo: -

Age: -

 0.976 - - - - - 0.976 Mlig455_025025 {REF} {Length: 836} {NoTransDecoderORF} {RNA1509_21228} {RNA1310_9218} {RNA815_7856.3}
24. MligTC455_45963 404 8.41 Mlig455_011128, Mlig455_043757

Neo: -

Age: -

 0.976 - - - - - 0.976

Mlig455_011128 {REF} {Length: 1167} {NoTransDecoderORF} {RNA1509_5701} {RNA1310_32112.1} {RNA815_453.1}

Mlig455_043757 {REF} {Length: 1039} {NoTransDecoderORF} {RNA1509_43730, RNA1509_5701} {RNA1310_32112.1, RNA1509_43730} {RNA1509_43730, RNA815_453.2}
25. MligTC455_08367 22 0.45 Mlig455_000673

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_000673 {REF} {Length: 899} {Pfam: WSC domain [PF01822.21, score=48.6]; PAN domain [PF00024.28, score=23.3]} {RNA1310_39474.2} {RNA815_33128}
26. MligTC455_53348 35 0.73 Mlig455_015410

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_015410 {REF} {Length: 651} {NoTransDecoderORF} {RNA1509_3658} {RNA1310_99291.2} {RNA815_125.1}
27. MligTC455_51254 45 0.94 Mlig455_062218

Neo: -

Age: -

 0.973 - - - - - 0.973 Mlig455_062218 {REF} {Length: 1157} {NoTransDecoderORF}
28. MligTC455_09656 14 0.3 Mlig455_008782

Neo: -

Age: -

 0.972 - - - - - 0.972 Mlig455_008782 {REF} {Length: 329} {NoTransDecoderORF}
29. MligTC455_22869 61 1.28 Mlig455_039906, Mlig455_039942

Neo: -

Age: -

Region-enriched R2: 3.948/0.03818

 HCRTR1 0.971 - - - - - 0.971

Mlig455_039906 {REF} {Length: 2770} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=99.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=18.8]} {Human: ENSG00000121764, HCRTR1, hypocretin receptor 1, [Score=78.6, Expect=4e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=82.4, Expect=2e-16]} {Dmel: FBgn0025595, AkhR, Adipokinetic hormone receptor, [Score=54.7, Expect=9e-08]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_16129_0_1, dd_Smed_v6_16129_0_1, [RH, Score=215, Expect=2e-65]} {RNA1310_40963.1}

Mlig455_039942 {REF} {Length: 1828} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=99.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=18.8]} {Human: ENSG00000121764, HCRTR1, hypocretin receptor 1, [Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=83.2, Expect=9e-17]} {Dmel: FBgn0025595, AkhR, Adipokinetic hormone receptor, [Score=54.7, Expect=9e-08]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=62.0, Expect=3e-10]} {Smed: dd_Smed_v6_16129_0_1, dd_Smed_v6_16129_0_1, [RH, Score=215, Expect=1e-65]} {RNA1310_40963.1}
30. MligTC455_28586 32 0.66 Mlig455_032084

Neo: -

Age: Up-Down-Down

 0.971 - - - - - 0.971 Mlig455_032084 {REF} {Length: 7595} {RNA1509_42521, RNA1509_44223, RNA1509_46209} {RNA1310_31499, RNA1509_42521, RNA1509_46209} {RNA1509_42521, RNA1509_46209, RNA815_19070}
31. MligTC455_28784 65 1.35 Mlig455_060676

Neo: -

Age: logFC(26M/2M)=-0.366

 ANKRD17 0.971 - - - - - 0.971 Mlig455_060676 {REF} {Length: 5241} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.5]; Ankyrin repeats (many copies) [PF13637.8, score=110.0]; Ankyrin repeat [PF13606.8, score=74.0]; Ankyrin repeats (many copies) [PF13857.8, score=61.8]; Mab-21 protein [PF03281.16, score=44.0]; Ankyrin repeat [PF00023.32, score=41.5]; ABC transporter transmembrane region [PF13748.8, score=21.9]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=95.5, Expect=4e-19]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=95.9, Expect=2e-19]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=80.1, Expect=8e-15]} {Celegans: WBGene00012124, T28D6.4, [Score=67.8, Expect=3e-11]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=90.5, Expect=2e-18]} {RNA1509_27730} {RNA1310_4721} {RNA815_5358.1}
32. MligTC455_56264 21 0.44 Mlig455_057708

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_057708 {REF} {Length: 755} {RNA1509_18097} {RNA1310_18939} {RNA815_5467.1}
33. MligTC455_17947 64 1.34 Mlig455_042563

Neo: -

Age: -

Region-enriched R2: 7.054/0.00113

 ASCL5 0.969 - - - - - 0.969 Mlig455_042563 {REF} {Length: 1821} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=52.5]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=84.7, Expect=6e-20]} {Mouse: ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=84.0, Expect=5e-20]} {Dmel: FBgn0002922, nau, nautilus, [Score=49.3, Expect=6e-07]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [RH, Score=90.9, Expect=4e-22]} {Smed: dd_Smed_v6_14753_0_1, dd_Smed_v6_14753_0_1, [RH, Score=76.6, Expect=2e-17]} {RNA1310_71187}
34. MligTC455_32661 38 0.78 Mlig455_068427

Neo: -

Age: -

 0.969 - - - - - 0.969 Mlig455_068427 {REF} {Length: 5227} {NoTransDecoderORF} {RNA1509_26128} {RNA1310_7005.1} {RNA815_8730.1}
35. MligTC455_01654 34 0.71 Mlig455_025189

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_025189 {REF} {Length: 577} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_76847} {RNA815_29511.2}
36. MligTC455_24621 43 0.9 Mlig455_034366

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_034366 {REF} {Length: 575} {NoTransDecoderORF}
37. MligTC455_28151 69 1.43 Mlig455_052923

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_052923 {REF} {Length: 885} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_34613}
38. MligTC455_28278 110 2.28 Mlig455_018484

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_018484 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
39. MligTC455_30255 132 2.75 Mlig455_011743

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.728/0.02036

 0.966 - - - - - 0.966 Mlig455_011743 {REF} {Length: 945} {TRANSSPLICED} {RNA1509_16349} {RNA1310_2575} {RNA815_54759}
40. MligTC455_13403 157 3.27 Mlig455_058321

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.878/0.03174

 LARP1 0.965 - - - - - 0.965 Mlig455_058321 {REF} {Length: 2328} {Human: ENSG00000155506, LARP1, La ribonucleoprotein domain family member 1, [Score=178, Expect=6e-52]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [Score=178, Expect=5e-52]; ENSMUSG00000025762, Larp1b, La ribonucleoprotein domain family, member 1B, [Score=171, Expect=9e-54]} {Dmel: FBgn0261618, larp, La related protein, [Score=172, Expect=4e-50]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [Score=136, Expect=2e-37]} {Smed: dd_Smed_v6_2667_0_1, dd_Smed_v6_2667_0_1, [Score=170, Expect=2e-49]} {RNA1509_29509} {RNA1310_3597.2, RNA1509_29509} {RNA1509_29509, RNA815_2607}
41. MligTC455_28329 89 1.86 Mlig455_031656

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_031656 {REF} {Length: 3392} {Pfam: Integrase core domain [PF00665.28, score=30.9]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=63.5, Expect=9e-13]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
42. MligTC455_49818 37 0.78 Mlig455_007221, Mlig455_007455

Neo: -

Age: -

 0.964 - - - - - 0.964

Mlig455_007221 {REF} {Length: 2050} {RNA1310_53527} {RNA815_61088}

Mlig455_007455 {REF} {Length: 3769} {Mouse: ENSMUSG00000054999, Naaladl1, N-acetylated alpha-linked acidic dipeptidase-like 1, [Score=56.6, Expect=8e-08]} {RNA1310_53527} {RNA815_58531}
43. MligTC455_50250 182 3.8 Mlig455_066969

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.390

 SIM1 0.964 - - - - - 0.964 Mlig455_066969 {REF} {Length: 3256} {Pfam: PAS fold [PF08447.14, score=73.2]; PAS fold [PF00989.27, score=58.1]; PAS domain [PF14598.8, score=53.9]; Helix-loop-helix DNA-binding domain [PF00010.28, score=22.4]} {Human: ENSG00000112246, SIM1, SIM bHLH transcription factor 1, [RH, Score=526, Expect=2e-175]; ENSG00000159263, SIM2, SIM bHLH transcription factor 2, [RH, Score=522, Expect=4e-175]} {Mouse: ENSMUSG00000019913, Sim1, single-minded family bHLH transcription factor 1, [RH, Score=525, Expect=4e-175]; ENSMUSG00000062713, Sim2, single-minded family bHLH transcription factor 2, [RH, Score=522, Expect=5e-179]} {Dmel: FBgn0004666, sim, single-minded, [RH, Score=471, Expect=2e-155]} {Celegans: WBGene00011327, hlh-34, Helix-loop-helix 34, [RH, Score=128, Expect=3e-32]} {Smed: dd_Smed_v6_17731_0_1, dd_Smed_v6_17731_0_1, [RH, Score=511, Expect=3e-171]} {RNA1310_34436} {RNA815_20408}
44. MligTC455_30270 406 8.46 Mlig455_012719, Mlig455_044289

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 4.823

Regeneration-enriched BL: 4.823

 0.963 - - - - - 0.963

Mlig455_012719 {REF} {Length: 392} {RNA1509_16349} {RNA1310_2575}

Mlig455_044289 {REF} {Length: 4784} {RNA1509_16349} {RNA1310_2575} {RNA815_3500.1}
45. MligTC455_14517 21 0.45 Mlig455_071167

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_071167 {REF} {Length: 785} {NoTransDecoderORF} {RNA1310_122612}
46. MligTC455_47068 69 1.43 Mlig455_060910

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_060910 {REF} {Length: 1012}
47. MligTC455_50100 86 1.8 Mlig455_031032

Neo: -

Age: -

Region-enriched R8: 4.201/0.00579

 SLC4A11 0.961 - - - - - 0.961 Mlig455_031032 {REF} {Length: 3497} {Pfam: HCO3- transporter family [PF00955.23, score=526.7]; Band 3 cytoplasmic domain [PF07565.15, score=23.8]; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 [PF00359.24, score=22.0]} {Human: ENSG00000088836, SLC4A11, solute carrier family 4 member 11, [RH, Score=547, Expect=3e-180]} {Mouse: ENSMUSG00000074796, Slc4a11, solute carrier family 4, sodium bicarbonate transporter-like, member 11, [RH, Score=533, Expect=2e-175]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=242, Expect=3e-66]} {Celegans: WBGene00019018, abts-3, Anion transporter ABTS-3; Anion/Bicarbonate TranSporter family, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_16577_0_1, dd_Smed_v6_16577_0_1, [RH, Score=904, Expect=0.0]} {RNA1509_55902} {RNA1310_18543} {RNA815_14015}
48. MligTC455_13046 94 1.96 Mlig455_027003, Mlig455_043462

Neo: -

Age: -

 0.96 - - - - - 0.960

Mlig455_027003 {REF} {Length: 2071} {NoTransDecoderORF} {RNA1509_31427} {RNA1310_20953.1} {RNA815_18897.1}

Mlig455_043462 {REF} {Length: 746} {NoTransDecoderORF} {RNA1310_97651}
49. MligTC455_23006 48 1 Mlig455_001776

Neo: -

Age: logFC(26M/2M)=-0.676

 0.959 - - - - - 0.959 Mlig455_001776 {REF} {Length: 2604} {RNA1310_41105} {RNA815_50956}
50. MligTC455_27802 89 1.86 Mlig455_057249

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_057249 {REF} {Length: 8422} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=129.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.3]; Integrase zinc binding domain [PF17921.3, score=71.9]; Integrase core domain [PF00665.28, score=47.6]; Aspartyl protease [PF13650.8, score=39.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.0]; Retroviral aspartyl protease [PF00077.22, score=28.6]; Aspartyl protease [PF09668.12, score=23.4]; Putative peptidase (DUF1758) [PF05585.14, score=22.5]; Retroviral aspartyl protease [PF08284.13, score=19.6]; DDE superfamily endonuclease [PF13358.8, score=19.1]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=342, Expect=8e-103]} {RNA1509_28802} {RNA1310_131.1} {RNA815_52.1}
51. MligTC455_42418 64 1.33 Mlig455_063557

Neo: -

Age: -

 SCNN1G 0.959 - - - - - 0.959 Mlig455_063557 {REF} {Length: 3686} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=197.1]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=75.5, Expect=1e-13]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=53.9, Expect=4e-07]; ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=52.0, Expect=1e-06]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=56.6, Expect=3e-08]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=318, Expect=6e-101]} {RNA1310_46167} {RNA815_32816}
52. MligTC455_16560 215 4.47 Mlig455_050739

Neo: -

Age: -

 C9orf116 0.958 - - - - - 0.958 Mlig455_050739 {REF} {Length: 1016} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4490) [PF14892.8, score=113.1]} {Human: ENSG00000160345, C9orf116, chromosome 9 open reading frame 116, [RH, Score=81.6, Expect=1e-20]} {Mouse: ENSMUSG00000026831, 1700007K13Rik, RIKEN cDNA 1700007K13 gene, [RH, Score=80.5, Expect=5e-20]} {Dmel: FBgn0083943, CG34107, [Score=64.3, Expect=2e-14]} {Smed: dd_Smed_v6_49903_0_1, dd_Smed_v6_49903_0_1, [RH, Score=75.5, Expect=5e-18]} {RNA1509_25772} {RNA1310_28661.1, RNA1509_25772} {RNA1509_25772, RNA815_31506}
53. MligTC455_29054 70 1.45 Mlig455_013486

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_013486 {REF} {Length: 1916} {NoTransDecoderORF} {RNA1310_69487} {RNA815_59599}
54. MligTC455_46857 65 1.36 Mlig455_027226

Neo: -

Age: Down-Up-Down

 TJP2 0.958 - - - - - 0.958 Mlig455_027226 {REF} {Length: 3999} {Pfam: PDZ domain [PF00595.26, score=90.1]; PDZ domain [PF17820.3, score=65.7]; Guanylate kinase [PF00625.23, score=35.9]; PDZ domain [PF13180.8, score=34.4]; ZU5 domain [PF00791.22, score=27.1]} {Human: ENSG00000119139, TJP2, tight junction protein 2, [RH, Score=184, Expect=3e-48]; ENSG00000277401, TJP1, tight junction protein 1, [RH, Score=184, Expect=5e-47]; ENSG00000104067, TJP1, tight junction protein 1, [RH, Score=184, Expect=5e-47]; ENSG00000285130, AL358113.1, tight junction protein 2, [RH, Score=182, Expect=1e-46]} {Mouse: ENSMUSG00000030516, Tjp1, tight junction protein 1, [RH, Score=185, Expect=1e-47]; ENSMUSG00000024812, Tjp2, tight junction protein 2, [RH, Score=182, Expect=1e-46]} {Dmel: FBgn0262614, pyd, polychaetoid, [Score=210, Expect=9e-56]} {Celegans: WBGene00013683, zoo-1, ZO-1 (Zonula Occludens tight junctional protein) Ortholog, [RH, Score=175, Expect=1e-44]} {Smed: dd_Smed_v6_7374_0_1, dd_Smed_v6_7374_0_1, [Score=53.1, Expect=7e-07]} {RNA1509_55128} {RNA1310_1784} {RNA815_1919}
55. MligTC455_52494 100 2.08 Mlig455_013751

Neo: -

Age: -

Region-enriched R6: 6.660/0.00069

 BEST4 0.958 - - - - - 0.958 Mlig455_013751 {REF} {Length: 1713} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=176.9]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=187, Expect=2e-53]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=181, Expect=2e-50]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=198, Expect=6e-56]} {Celegans: WBGene00022797, best-24, Bestrophin homolog 24, [Score=168, Expect=1e-45]} {Smed: dd_Smed_v6_22175_0_4, dd_Smed_v6_22175_0_4, [Score=295, Expect=7e-95]} {RNA1310_16906} {RNA815_14720}
56. MligTC455_10907 39 0.81 Mlig455_030325

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_030325 {REF} {Length: 1588} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.2]} {RNA1310_27913} {RNA815_25050}
57. MligTC455_27591 24 0.5 Mlig455_021100

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_021100 {REF} {Length: 1478} {RNA1509_46103} {RNA1310_81900} {RNA815_8813.1}
58. MligTC455_49308 26 0.55 Mlig455_055283

Neo: -

Age: -

 ZAN 0.957 - - - - - 0.957 Mlig455_055283 {REF} {Length: 2486} {Pfam: Glycine rich protein [PF12810.9, score=31.8]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=65.1, Expect=4e-10]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=61.6, Expect=3e-09]} {Dmel: FBgn0053196, dpy, dumpy, [Score=51.6, Expect=3e-06]} {RNA1310_18897} {RNA815_40026}
59. MligTC455_07516 112 2.34 Mlig455_060804

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_060804 {REF} {Length: 844} {Pfam: Presenilin [PF01080.19, score=19.5]} {RNA1509_21195} {RNA1310_23162} {RNA815_26275}
60. MligTC455_11319 34 0.7 Mlig455_054806

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_054806 {REF} {Length: 275} {NoTransDecoderORF}
61. MligTC455_25776 220 4.59 Mlig455_000479, Mlig455_024867

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_000479 {REF} {Length: 548} {Pfam: PHD-finger [PF00628.31, score=27.6]} {RNA1310_79789}

Mlig455_024867 {REF} {Length: 1776} {Pfam: PHD-finger [PF00628.31, score=25.7]} {RNA1310_46465}
62. MligTC455_18879 26 0.55 Mlig455_063345

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_063345 {REF} {Length: 769} {NoTransDecoderORF}
63. MligTC455_27911 45 0.94 Mlig455_049225, Mlig455_049228

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.777

 FAT4 0.955 - - - - - 0.955

Mlig455_049225 {REF} {Length: 12873} {Pfam: Cadherin domain [PF00028.19, score=824.7]; Cadherin prodomain like [PF08758.13, score=35.4]; Cadherin-like [PF16184.7, score=28.6]; Peptidase propeptide and YPEB domain [PF03413.21, score=22.0]; Bacterial cadherin-like domain [PF17803.3, score=19.8]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=310, Expect=1e-83]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=368, Expect=4e-101]} {Dmel: FBgn0001075, ft, fat, [Score=283, Expect=2e-75]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=176, Expect=4e-43]} {Smed: dd_Smed_v6_12895_0_1, dd_Smed_v6_12895_0_1, [Score=155, Expect=2e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}

Mlig455_049228 {REF} {Length: 24107} {Pfam: Cadherin domain [PF00028.19, score=1466.0]; RET Cadherin like domain 1 [PF17756.3, score=58.7]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=48.5]; Cadherin-like [PF16184.7, score=34.1]; Cadherin prodomain like [PF08758.13, score=29.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=396, Expect=8e-109]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=389, Expect=5e-107]} {Dmel: FBgn0001075, ft, fat, [Score=334, Expect=1e-90]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=183, Expect=5e-45]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=158, Expect=1e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}
64. MligTC455_51628 96 2.01 Mlig455_004880, Mlig455_047262

Neo: -

Age: -

Region-enriched R2: 7.137/0.00371

 0.955 - - - - - 0.955

Mlig455_004880 {REF} {Length: 548} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_75098} {RNA815_1171.1}

Mlig455_047262 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_75098} {RNA815_1171.1}
65. MligTC455_24261 90 1.87 Mlig455_022408

Neo: -

Age: logFC(26M/2M)=-0.488

 0.954 - - - - - 0.954 Mlig455_022408 {REF} {Length: 2883} {Pfam: Dpy-30 motif [PF05186.15, score=36.5]} {RNA1509_44741} {RNA1310_10316, RNA1509_44741} {RNA1509_44741, RNA815_22683}
66. MligTC455_09724 48 1.01 Mlig455_009261

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_009261 {REF} {Length: 1012} {NoTransDecoderORF}
67. MligTC455_26941 8 0.16 Mlig455_040102

Neo: -

Age: Down-Up-Down

 0.952 - - - - 0.952 - Mlig455_040102 {REF} {Length: 3150} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.5]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=72.4, Expect=3e-13]} {RNA1509_27849} {RNA1310_5710.1} {RNA815_6291.1}
68. MligTC455_29937 75 1.55 Mlig455_053384

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_053384 {REF} {Length: 3610} {NoTransDecoderORF} {RNA1509_57191} {RNA1310_45092} {RNA815_10095.1}
69. MligTC455_15541 46 0.95 Mlig455_004049

Neo: -

Age: -

 SYT7 0.951 - - - - - 0.951 Mlig455_004049 {REF} {Length: 2753} {Pfam: C2 domain [PF00168.32, score=65.0]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=110, Expect=2e-26]; ENSG00000143858, SYT2, synaptotagmin 2, [Score=105, Expect=1e-24]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=105, Expect=1e-24]; ENSMUSG00000027849, Syt6, synaptotagmin VI, [Score=104, Expect=3e-24]; ENSMUSG00000035864, Syt1, synaptotagmin I, [Score=103, Expect=3e-24]; ENSMUSG00000024743, Syt7, synaptotagmin VII, [Score=102, Expect=1e-23]; ENSMUSG00000024261, Syt4, synaptotagmin IV, [Score=100, Expect=6e-23]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=107, Expect=1e-25]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=117, Expect=2e-29]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=103, Expect=2e-24]} {RNA1509_57171} {RNA1310_13836} {RNA815_4752.1}
70. MligTC455_39858 79 1.66 Mlig455_038520

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.278

 NECAB1 0.951 - - - - - 0.951 Mlig455_038520 {REF} {Length: 1812} {Pfam: EF-hand domain [PF13405.8, score=35.3]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.7]; EF-hand domain pair [PF13833.8, score=27.4]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=26.7]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=187, Expect=2e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=181, Expect=2e-53]} {RNA1310_5770} {RNA815_27367}
71. MligTC455_00307 21 0.44 Mlig455_065049

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_065049 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_18025} {RNA1310_50423.1} {RNA815_44681}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA