TomoSeq data search

Data search

Results for MligTC455_29080

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29080	526	10.95	Mlig455_027059	Neo: - Age: Up-Down-Down	GABPB1	Mlig455_027059 {REF} {Length: 2992} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.3]; Ankyrin repeat [PF00023.32, score=50.0]; Ankyrin repeat [PF13606.8, score=46.5]; Ankyrin repeats (many copies) [PF13857.8, score=46.2]; Ankyrin repeats (many copies) [PF13637.8, score=42.0]} {Human: ENSG00000104064, GABPB1, GA binding protein transcription factor subunit beta 1, [Score=75.5, Expect=3e-15]} {Mouse: ENSMUSG00000027361, Gabpb1, GA repeat binding protein, beta 1, [Score=75.1, Expect=2e-15]} {Dmel: FBgn0036814, CG14073, [Score=62.0, Expect=9e-11]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=60.1, Expect=3e-10]} {Smed: dd_Smed_v6_12476_0_1, dd_Smed_v6_12476_0_1, [Score=56.6, Expect=3e-09]} {RNA1509_25445} {RNA1310_17845.1, RNA1509_25445} {RNA1509_25445, RNA815_16485.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29080

526

10.95

Mlig455_027059

Neo: -

Age: Up-Down-Down

GABPB1

Mlig455_027059 {REF} {Length: 2992} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.3]; Ankyrin repeat [PF00023.32, score=50.0]; Ankyrin repeat [PF13606.8, score=46.5]; Ankyrin repeats (many copies) [PF13857.8, score=46.2]; Ankyrin repeats (many copies) [PF13637.8, score=42.0]} {Human: ENSG00000104064, GABPB1, GA binding protein transcription factor subunit beta 1, [Score=75.5, Expect=3e-15]} {Mouse: ENSMUSG00000027361, Gabpb1, GA repeat binding protein, beta 1, [Score=75.1, Expect=2e-15]} {Dmel: FBgn0036814, CG14073, [Score=62.0, Expect=9e-11]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=60.1, Expect=3e-10]} {Smed: dd_Smed_v6_12476_0_1, dd_Smed_v6_12476_0_1, [Score=56.6, Expect=3e-09]} {RNA1509_25445} {RNA1310_17845.1, RNA1509_25445} {RNA1509_25445, RNA815_16485.1}

Cumulative graph for MligTC455_29080

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.701	3.651	0.62828	1.00000
RegionR2	-0.099	3.651	0.85719	1.00000
RegionR3	-0.682	3.651	0.15813	0.67340
RegionR4	0.487	3.651	0.32893	0.64690
RegionR5	0.404	3.651	0.30260	0.63855
RegionR6	0.893	3.651	0.03308	0.33877
RegionR7	0.359	3.651	0.53764	1.00000
RegionR8	-0.661	3.651	0.43849	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.236	3.651	0.90908	1.00000
RegenerationR2	0.139	3.651	0.74660	0.97204
RegenerationR3	0.496	3.651	0.32934	0.75516
RegenerationR4	-0.281	3.651	0.55442	0.89397
RegenerationR5	0.31	3.651	0.45925	0.83586
RegenerationR6	0.229	3.651	0.59785	0.86749
RegenerationBL	0.942	3.651	0.07729	0.32444
RegenerationTP	0.919	3.651	0.14577	0.56860

Genes with expression patterns similar to MligTC455_29080

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29080	526	10.95	Mlig455_027059	Neo: - Age: Up-Down-Down	GABPB1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027059 {REF} {Length: 2992} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.3]; Ankyrin repeat [PF00023.32, score=50.0]; Ankyrin repeat [PF13606.8, score=46.5]; Ankyrin repeats (many copies) [PF13857.8, score=46.2]; Ankyrin repeats (many copies) [PF13637.8, score=42.0]} {Human: ENSG00000104064, GABPB1, GA binding protein transcription factor subunit beta 1, [Score=75.5, Expect=3e-15]} {Mouse: ENSMUSG00000027361, Gabpb1, GA repeat binding protein, beta 1, [Score=75.1, Expect=2e-15]} {Dmel: FBgn0036814, CG14073, [Score=62.0, Expect=9e-11]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=60.1, Expect=3e-10]} {Smed: dd_Smed_v6_12476_0_1, dd_Smed_v6_12476_0_1, [Score=56.6, Expect=3e-09]} {RNA1509_25445} {RNA1310_17845.1, RNA1509_25445} {RNA1509_25445, RNA815_16485.1}
2.	MligTC455_29079	497	10.35	Mlig455_009156	Neo: - Age: logFC(26M/2M)=0.687		4.897	0.993	0.942	0.987	0.984	0.991	-	Mlig455_009156 {REF} {Length: 1357} {NoTransDecoderORF} {RNA1509_25445} {RNA1310_20024} {RNA815_16485.1}
3.	MligTC455_16218	507	10.57	Mlig455_008713	Neo: - Age: Up-Down-Up Region-enriched R6: 1.915/0.00013 Region-enriched R7: 1.907/0.00836 Region-enriched R5: 1.352/0.00254		1.694	-	-	0.730	-	-	0.964	Mlig455_008713 {REF} {Length: 2746} {RNA1509_37336} {RNA1310_6936.1} {RNA815_9561.1}
4.	MligTC455_42498	845	17.61	Mlig455_061340	Neo: - Age: - Region-enriched R4: 1.646/0.00161	PPHLN1	0.971	-	-	-	-	-	0.971	Mlig455_061340 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=21.8]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [Score=73.9, Expect=3e-14]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_3002_0_2, dd_Smed_v6_3002_0_2, [Score=72.0, Expect=5e-14]} {RNA1509_3916} {RNA1310_29650.1, RNA1509_3916} {RNA1509_3916, RNA815_12725}
5.	MligTC455_48078	569	11.85	Mlig455_046853	Neo: - Age: logFC(26M/2M)=0.753		0.961	-	-	0.961	-	-	-	Mlig455_046853 {REF} {Length: 2156} {TRANSSPLICED} {RNA1509_16364} {RNA1310_13050.1} {RNA815_7204}
6.	MligTC455_24769	227	4.72	Mlig455_027516	Neo: - Age: - Regeneration-upregulated BL: 4.185 Regeneration-enriched BL: 4.185	AMBRA1	0.955	-	-	-	-	0.955	-	Mlig455_027516 {REF} {Length: 4785} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.9]} {Human: ENSG00000110497, AMBRA1, autophagy and beclin 1 regulator 1, [RH, Score=79.7, Expect=1e-14]} {Mouse: ENSMUSG00000040506, Ambra1, autophagy/beclin 1 regulator 1, [RH, Score=79.7, Expect=9e-15]} {RNA1509_17935} {RNA1310_8113.1, RNA1509_17935} {RNA1509_17935, RNA815_408.1}