Data search
Results for MligTC455_29079
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29079 | 497 | 10.35 | Mlig455_009156 | Neo: - Age: logFC(26M/2M)=0.687 |
Mlig455_009156 {REF} {Length: 1357} {NoTransDecoderORF} {RNA1509_25445} {RNA1310_20024} {RNA815_16485.1} |
Cumulative graph for MligTC455_29079
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.663 | 3.714 | 0.64831 | 1.00000 | |
| RegionR2 | -0.16 | 3.714 | 0.77046 | 1.00000 | |
| RegionR3 | -0.758 | 3.714 | 0.11603 | 0.59154 | |
| RegionR4 | 0.39 | 3.714 | 0.44157 | 0.77022 | |
| RegionR5 | 0.355 | 3.714 | 0.36244 | 0.71488 | |
| RegionR6 | 0.888 | 3.714 | 0.03261 | 0.33574 | |
| RegionR7 | 0.468 | 3.714 | 0.40584 | 1.00000 | |
| RegionR8 | -0.521 | 3.714 | 0.52351 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.849 | 3.714 | 0.26030 | 0.96822 | |
| RegenerationR2 | 0.088 | 3.714 | 0.83841 | 1.00000 | |
| RegenerationR3 | 0.552 | 3.714 | 0.27528 | 0.70953 | |
| RegenerationR4 | -0.274 | 3.714 | 0.57092 | 0.90189 | |
| RegenerationR5 | 0.3 | 3.714 | 0.47639 | 0.84508 | |
| RegenerationR6 | 0.119 | 3.714 | 0.78457 | 0.96990 | |
| RegenerationBL | 0.768 | 3.714 | 0.14584 | 0.45594 | |
| RegenerationTP | 0.69 | 3.714 | 0.26680 | 0.71446 |
Genes with expression patterns similar to MligTC455_29079
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29079 | 497 | 10.35 | Mlig455_009156 | Neo: - Age: logFC(26M/2M)=0.687 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009156 {REF} {Length: 1357} {NoTransDecoderORF} {RNA1509_25445} {RNA1310_20024} {RNA815_16485.1} | |
| 2. | MligTC455_29080 | 526 | 10.95 | Mlig455_027059 | Neo: - Age: Up-Down-Down |
GABPB1 | 4.897 | 0.993 | 0.942 | 0.987 | 0.984 | 0.991 | - | Mlig455_027059 {REF} {Length: 2992} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.3]; Ankyrin repeat [PF00023.32, score=50.0]; Ankyrin repeat [PF13606.8, score=46.5]; Ankyrin repeats (many copies) [PF13857.8, score=46.2]; Ankyrin repeats (many copies) [PF13637.8, score=42.0]} {Human: ENSG00000104064, GABPB1, GA binding protein transcription factor subunit beta 1, [Score=75.5, Expect=3e-15]} {Mouse: ENSMUSG00000027361, Gabpb1, GA repeat binding protein, beta 1, [Score=75.1, Expect=2e-15]} {Dmel: FBgn0036814, CG14073, [Score=62.0, Expect=9e-11]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=60.1, Expect=3e-10]} {Smed: dd_Smed_v6_12476_0_1, dd_Smed_v6_12476_0_1, [Score=56.6, Expect=3e-09]} {RNA1509_25445} {RNA1310_17845.1, RNA1509_25445} {RNA1509_25445, RNA815_16485.1} |
| 3. | MligTC455_48078 | 569 | 11.85 | Mlig455_046853 | Neo: - Age: logFC(26M/2M)=0.753 |
1.678 | - | - | 0.975 | 0.703 | - | - | Mlig455_046853 {REF} {Length: 2156} {TRANSSPLICED} {RNA1509_16364} {RNA1310_13050.1} {RNA815_7204} | |
| 4. | MligTC455_44422 | 527 | 10.98 | Mlig455_022718 | Neo: - Age: - Region-enriched R6: 1.348/0.01141 |
CREBRF | 0.956 | - | - | - | - | - | 0.956 | Mlig455_022718 {REF} {Length: 2918} {TRANSSPLICED} {Pfam: bZIP transcription factor [PF00170.23, score=24.9]} {Human: ENSG00000164463, CREBRF, CREB3 regulatory factor, [RH, Score=74.7, Expect=9e-14]} {Mouse: ENSMUSG00000048249, Crebrf, CREB3 regulatory factor, [RH, Score=74.7, Expect=8e-14]} {Dmel: FBgn0039209, REPTOR, Repressed by TOR, [RH, Score=100, Expect=4e-22]} {Smed: dd_Smed_v6_6373_0_1, dd_Smed_v6_6373_0_1, [RH, Score=60.1, Expect=6e-10]} {RNA1509_17556} {RNA1310_18927.1, RNA1509_17556} {RNA1509_17556, RNA815_13663.1} |
| 5. | MligTC455_47208 | 1083 | 22.56 | Mlig455_034771 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.670 Regeneration-enriched BL: 1.670 |
E2F4 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_034771 {REF} {Length: 2224} {TRANSSPLICED} {Pfam: E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=89.0]; E2F transcription factor CC-MB domain [PF16421.7, score=79.6]} {Human: ENSG00000205250, E2F4, E2F transcription factor 4, [RH, Score=207, Expect=2e-62]} {Mouse: ENSMUSG00000014859, E2f4, E2F transcription factor 4, [RH, Score=206, Expect=4e-62]} {Dmel: FBgn0011766, E2f1, E2F transcription factor 1, [RH, Score=107, Expect=5e-25]} {Celegans: WBGene00001161, efl-1, E2F-like (Mammalian transcription factor); EFL-1, [RH, Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_3130_0_1, dd_Smed_v6_3130_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1310_22021, RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1509_11778, RNA1509_30431, RNA1509_39358, RNA815_22661} |
| 6. | MligTC455_33824 | 1641 | 34.2 | Mlig455_003443, Mlig455_030668 | Neo: Irradiation Age: logFC(26M/2M)=0.338 Region-enriched R5: 2.228/0.00000 |
AGAP1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_003443 {REF} {Length: 4766} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=122.4]; Ras family [PF00071.24, score=60.4]; PH domain [PF00169.31, score=35.4]; PHD-finger [PF00628.31, score=24.2]; Ankyrin repeats (many copies) [PF13637.8, score=21.0]; Ring finger domain [PF13639.8, score=19.6]; Ankyrin repeats (3 copies) [PF12796.9, score=19.3]; Pleckstrin homology domain [PF15413.8, score=19.3]} {Human: ENSG00000157985, AGAP1, ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, [RH, Score=376, Expect=1e-115]; ENSG00000133612, AGAP3, ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, [RH, Score=374, Expect=6e-117]} {Mouse: ENSMUSG00000055013, Agap1, ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, [RH, Score=379, Expect=4e-116]; ENSMUSG00000023353, Agap3, ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, [RH, Score=369, Expect=5e-117]} {Dmel: FBgn0028509, CenG1A, Centaurin gamma 1A, [RH, Score=275, Expect=1e-77]} {Celegans: WBGene00000566, cnt-2, Arf-GAP with ANK repeat and PH domain-containing protein cnt-2, [RH, Score=297, Expect=1e-85]} {Smed: dd_Smed_v6_4301_0_2, dd_Smed_v6_4301_0_2, [RH, Score=415, Expect=7e-128]} {RNA1509_34557} {RNA1310_2691} {RNA815_9681.2} Mlig455_030668 {REF} {Length: 4042} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=124.6]; PH domain [PF00169.31, score=35.6]; Ankyrin repeats (many copies) [PF13637.8, score=21.3]; Pleckstrin homology domain [PF15413.8, score=19.7]; Ankyrin repeats (3 copies) [PF12796.9, score=19.5]} {Human: ENSG00000157985, AGAP1, ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, [RH, Score=377, Expect=3e-117]; ENSG00000133612, AGAP3, ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, [RH, Score=375, Expect=1e-118]} {Mouse: ENSMUSG00000055013, Agap1, ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, [RH, Score=380, Expect=1e-119]; ENSMUSG00000023353, Agap3, ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, [RH, Score=370, Expect=1e-118]} {Dmel: FBgn0028509, CenG1A, Centaurin gamma 1A, [RH, Score=250, Expect=7e-71]} {Celegans: WBGene00000566, cnt-2, Arf-GAP with ANK repeat and PH domain-containing protein cnt-2, [RH, Score=299, Expect=4e-86]} {Smed: dd_Smed_v6_4301_0_2, dd_Smed_v6_4301_0_2, [RH, Score=414, Expect=2e-129]} {RNA1509_18121} {RNA1310_2691} {RNA815_9681.1} |