TomoSeq data search

Data search

Results for MligTC455_29128

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29128

72

1.51

Mlig455_038660

Neo: -

Age: -

Region-enriched R2: 5.702/0.02667

Mlig455_038660 {REF} {Length: 401} {NoTransDecoderORF} {RNA1509_56566} {RNA1310_39137} {RNA815_43871}

Cumulative graph for MligTC455_29128

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-11.099	1.76	0.99983	1.00000
RegionR2	5.702	1.76	0.00133	0.02667
RegionR3	4.13	1.76	0.00498	0.09477
RegionR4	1.303	1.76	0.30821	0.62233
RegionR5	3.446	1.76	0.00948	0.05551
RegionR6	3.862	1.76	0.01416	0.20745
RegionR7	-3.051	1.76	0.99977	1.00000
RegionR8	-4.293	1.76	0.99959	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.68	1.76	0.99973	1.00000
RegenerationR2	-1.672	1.76	0.14945	0.58269
RegenerationR3	1.653	1.76	0.10414	0.51167
RegenerationR4	2.333	1.76	0.03931	0.31984
RegenerationR5	2.029	1.76	0.02214	0.25665
RegenerationR6	1.052	1.76	0.36127	0.70563
RegenerationBL	4.683	1.76	0.02214	0.16237
RegenerationTP	6.67	1.76	0.01012	0.17100

Genes with expression patterns similar to MligTC455_29128

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29128	72	1.51	Mlig455_038660	Neo: - Age: - Region-enriched R2: 5.702/0.02667		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_038660 {REF} {Length: 401} {NoTransDecoderORF} {RNA1509_56566} {RNA1310_39137} {RNA815_43871}
2.	MligTC455_06530	27	0.57	Mlig455_031177	Neo: - Age: - Region-enriched R4: 5.786/0.04241		1	-	-	1.000	-	-	-	Mlig455_031177 {REF} {Length: 488} {NoTransDecoderORF}
3.	MligTC455_19083	43	0.9	Mlig455_058600	Neo: - Age: Up-Up-Down		0.996	-	-	0.996	-	-	-	Mlig455_058600 {REF} {Length: 1797} {NoTransDecoderORF} {RNA1509_49394} {RNA1310_30812, RNA1509_49394} {RNA1509_49394, RNA815_50223}
4.	MligTC455_37609	27	0.55	Mlig455_026308, Mlig455_026350	Neo: - Age: -	KCNH8	0.988	-	-	0.988	-	-	-	Mlig455_026308 {REF} {Length: 3639} {Pfam: Ion transport protein [PF00520.33, score=101.8]; PAS domain [PF13426.9, score=61.2]; Ion channel [PF07885.18, score=45.1]; Cyclic nucleotide-binding domain [PF00027.31, score=32.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=26.1]; PAS fold [PF08447.14, score=20.6]; PAS fold [PF00989.27, score=19.7]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [Score=536, Expect=1e-172]; ENSG00000135519, KCNH3, potassium voltage-gated channel subfamily H member 3, [Score=521, Expect=8e-167]; ENSG00000089558, KCNH4, potassium voltage-gated channel subfamily H member 4, [Score=512, Expect=2e-164]} {Mouse: ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=514, Expect=2e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=4e-130]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=764, Expect=0.0]} {RNA1509_55158} {RNA1310_3235} {RNA815_4951.1} Mlig455_026350 {REF} {Length: 4084} {Pfam: Ion transport protein [PF00520.33, score=101.4]; PAS domain [PF13426.9, score=61.9]; Ion channel [PF07885.18, score=45.2]; Cyclic nucleotide-binding domain [PF00027.31, score=34.5]; PAS fold [PF08447.14, score=22.0]; PAS fold [PF00989.27, score=21.5]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [RH, Score=542, Expect=1e-174]} {Mouse: ENSMUSG00000035580, Kcnh8, potassium voltage-gated channel, subfamily H (eag-related), member 8, [RH, Score=540, Expect=4e-174]; ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=513, Expect=7e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=718, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=8e-131]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=767, Expect=0.0]} {RNA1509_55158} {RNA1310_3235, RNA1509_55158} {RNA1509_55158, RNA815_4951.1}
5.	MligTC455_11100	14	0.3	Mlig455_017046	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_017046 {REF} {Length: 1178} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}
6.	MligTC455_20231	57	1.19	Mlig455_053859	Neo: - Age: Down-Up-Up Regeneration-downregulated R4: -5.496 Regeneration-depleted R4: -5.496		0.975	-	-	0.975	-	-	-	Mlig455_053859 {REF} {Length: 4284} {RNA1509_19779} {RNA1310_3385} {RNA815_965}
7.	MligTC455_08492	206	4.3	Mlig455_060683	Neo: - Age: - Region-enriched R6: 3.828/0.00000	SEPT4	0.967	-	-	-	-	0.967	-	Mlig455_060683 {REF} {Length: 2892} {Pfam: Septin [PF00735.20, score=398.8]; 50S ribosome-binding GTPase [PF01926.25, score=39.7]; RsgA GTPase [PF03193.18, score=36.4]; AIG1 family [PF04548.18, score=28.2]; Dynamin family [PF00350.25, score=27.7]; ABC transporter [PF00005.29, score=20.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=19.2]; Virulence-associated protein E [PF05272.13, score=18.5]} {Human: ENSG00000108387, SEPT4, septin 4, [RH, Score=442, Expect=2e-153]; ENSG00000284874, SEPT5-GP1BB, SEPT5-GP1BB readthrough, [RH, Score=433, Expect=5e-150]; ENSG00000184702, SEPT5, septin 5, [RH, Score=433, Expect=3e-150]} {Mouse: ENSMUSG00000020486, Sept4, septin 4, [RH, Score=439, Expect=2e-151]; ENSMUSG00000072214, Sept5, septin 5, [RH, Score=429, Expect=8e-149]} {Dmel: FBgn0259923, Sep4, Septin 4, [RH, Score=430, Expect=2e-148]} {Celegans: WBGene00006793, unc-59, [Score=290, Expect=2e-93]} {Smed: dd_Smed_v6_1717_0_1, dd_Smed_v6_1717_0_1, [RH, Score=467, Expect=9e-163]} {RNA1509_15235, RNA1509_34622} {RNA1310_14365, RNA1509_34622} {RNA1509_34622, RNA815_8672.1}
8.	MligTC455_12124	22	0.46	Mlig455_008041	Neo: - Age: -	POMGNT1	0.96	-	-	0.960	-	-	-	Mlig455_008041 {REF} {Length: 1990} {Pfam: GNT-I family [PF03071.17, score=56.0]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [Score=192, Expect=1e-52]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [Score=192, Expect=5e-53]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=67.4, Expect=1e-11]} {Celegans: WBGene00019786, M70.4, [RH, Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_12622_0_1, dd_Smed_v6_12622_0_1, [Score=48.1, Expect=1e-05]} {RNA1509_56901} {RNA1310_37241.1} {RNA815_25346}
9.	MligTC455_31951	24	0.51	Mlig455_042582	Neo: - Age: -	KCTD1	0.957	-	-	-	-	0.957	-	Mlig455_042582 {REF} {Length: 2050} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=68.9, Expect=5e-12]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=68.9, Expect=4e-12]} {RNA1509_56255} {RNA1310_16403.1} {RNA815_36960}
10.	MligTC455_20652	178	3.71	Mlig455_052421	Neo: - Age: Down-Up-Up		0.952	-	-	-	-	0.952	-	Mlig455_052421 {REF} {Length: 694} {NoTransDecoderORF} {RNA1310_55166} {RNA815_26630}
11.	MligTC455_33914	63	1.31	Mlig455_069339	Neo: - Age: -		0.952	-	-	0.952	-	-	-	Mlig455_069339 {REF} {Length: 2370} {Pfam: Spondin_N [PF06468.15, score=27.9]} {Dmel: FBgn0033710, CG17739, [Score=49.7, Expect=4e-06]} {RNA1310_29306} {RNA815_50316}
12.	MligTC455_17590	87	1.82	Mlig455_062602	Neo: - Age: - Region-enriched R8: 3.598/0.04613		0.951	-	-	-	0.951	-	-	Mlig455_062602 {REF} {Length: 695} {NoTransDecoderORF} {RNA1310_54038} {RNA815_27582}
13.	MligTC455_30887	96	1.99	Mlig455_009606	Neo: - Age: Down-Up-Down Region-enriched R8: 4.157/0.04948 Region-enriched R2: 3.891/0.00660 Region-enriched R7: 3.804/0.00783		0.951	-	-	0.951	-	-	-	Mlig455_009606 {REF} {Length: 3404} {Pfam: CD34/Podocalyxin family [PF06365.14, score=18.4]} {RNA1509_53360} {RNA1310_3978.1} {RNA815_1194.1}

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