TomoSeq data search

Data search

Results for MligTC455_37609

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_37609	27	0.55	Mlig455_026308, Mlig455_026350	Neo: - Age: -	KCNH8	Mlig455_026308 {REF} {Length: 3639} {Pfam: Ion transport protein [PF00520.33, score=101.8]; PAS domain [PF13426.9, score=61.2]; Ion channel [PF07885.18, score=45.1]; Cyclic nucleotide-binding domain [PF00027.31, score=32.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=26.1]; PAS fold [PF08447.14, score=20.6]; PAS fold [PF00989.27, score=19.7]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [Score=536, Expect=1e-172]; ENSG00000135519, KCNH3, potassium voltage-gated channel subfamily H member 3, [Score=521, Expect=8e-167]; ENSG00000089558, KCNH4, potassium voltage-gated channel subfamily H member 4, [Score=512, Expect=2e-164]} {Mouse: ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=514, Expect=2e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=4e-130]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=764, Expect=0.0]} {RNA1509_55158} {RNA1310_3235} {RNA815_4951.1} Mlig455_026350 {REF} {Length: 4084} {Pfam: Ion transport protein [PF00520.33, score=101.4]; PAS domain [PF13426.9, score=61.9]; Ion channel [PF07885.18, score=45.2]; Cyclic nucleotide-binding domain [PF00027.31, score=34.5]; PAS fold [PF08447.14, score=22.0]; PAS fold [PF00989.27, score=21.5]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [RH, Score=542, Expect=1e-174]} {Mouse: ENSMUSG00000035580, Kcnh8, potassium voltage-gated channel, subfamily H (eag-related), member 8, [RH, Score=540, Expect=4e-174]; ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=513, Expect=7e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=718, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=8e-131]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=767, Expect=0.0]} {RNA1509_55158} {RNA1310_3235, RNA1509_55158} {RNA1509_55158, RNA815_4951.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37609

0.55

Mlig455_026308, Mlig455_026350

Neo: -

Age: -

KCNH8

Mlig455_026308 {REF} {Length: 3639} {Pfam: Ion transport protein [PF00520.33, score=101.8]; PAS domain [PF13426.9, score=61.2]; Ion channel [PF07885.18, score=45.1]; Cyclic nucleotide-binding domain [PF00027.31, score=32.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=26.1]; PAS fold [PF08447.14, score=20.6]; PAS fold [PF00989.27, score=19.7]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [Score=536, Expect=1e-172]; ENSG00000135519, KCNH3, potassium voltage-gated channel subfamily H member 3, [Score=521, Expect=8e-167]; ENSG00000089558, KCNH4, potassium voltage-gated channel subfamily H member 4, [Score=512, Expect=2e-164]} {Mouse: ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=514, Expect=2e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=4e-130]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=764, Expect=0.0]} {RNA1509_55158} {RNA1310_3235} {RNA815_4951.1}

Mlig455_026350 {REF} {Length: 4084} {Pfam: Ion transport protein [PF00520.33, score=101.4]; PAS domain [PF13426.9, score=61.9]; Ion channel [PF07885.18, score=45.2]; Cyclic nucleotide-binding domain [PF00027.31, score=34.5]; PAS fold [PF08447.14, score=22.0]; PAS fold [PF00989.27, score=21.5]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [RH, Score=542, Expect=1e-174]} {Mouse: ENSMUSG00000035580, Kcnh8, potassium voltage-gated channel, subfamily H (eag-related), member 8, [RH, Score=540, Expect=4e-174]; ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=513, Expect=7e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=718, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=8e-131]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=767, Expect=0.0]} {RNA1509_55158} {RNA1310_3235, RNA1509_55158} {RNA1509_55158, RNA815_4951.1}

Cumulative graph for MligTC455_37609

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.572	1.053	0.99964	1.00000
RegionR2	4.507	1.053	0.02693	0.18460
RegionR3	1.838	1.053	0.28027	0.82412
RegionR4	1.192	1.053	0.32632	0.64428
RegionR5	1.013	1.053	0.43752	0.79786
RegionR6	3.469	1.053	0.04950	0.41663
RegionR7	-1.645	1.053	0.99970	1.00000
RegionR8	-3.802	1.053	0.99958	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.166	1.053	0.99996	1.00000
RegenerationR2	-0.916	1.053	0.35650	0.78659
RegenerationR3	1.127	1.053	0.39917	0.80210
RegenerationR4	0.533	1.053	0.55846	0.89604
RegenerationR5	0.929	1.053	0.43816	0.82309
RegenerationR6	0.733	1.053	0.51958	0.82030
RegenerationBL	-0.867	1.053	0.99977	1.00000
RegenerationTP	0.78	1.053	0.99993	1.00000

Genes with expression patterns similar to MligTC455_37609

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37609	27	0.55	Mlig455_026308, Mlig455_026350	Neo: - Age: -	KCNH8	4	-	1.000	1.000	1.000	1.000	-	Mlig455_026308 {REF} {Length: 3639} {Pfam: Ion transport protein [PF00520.33, score=101.8]; PAS domain [PF13426.9, score=61.2]; Ion channel [PF07885.18, score=45.1]; Cyclic nucleotide-binding domain [PF00027.31, score=32.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=26.1]; PAS fold [PF08447.14, score=20.6]; PAS fold [PF00989.27, score=19.7]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [Score=536, Expect=1e-172]; ENSG00000135519, KCNH3, potassium voltage-gated channel subfamily H member 3, [Score=521, Expect=8e-167]; ENSG00000089558, KCNH4, potassium voltage-gated channel subfamily H member 4, [Score=512, Expect=2e-164]} {Mouse: ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=514, Expect=2e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=710, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=4e-130]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=764, Expect=0.0]} {RNA1509_55158} {RNA1310_3235} {RNA815_4951.1} Mlig455_026350 {REF} {Length: 4084} {Pfam: Ion transport protein [PF00520.33, score=101.4]; PAS domain [PF13426.9, score=61.9]; Ion channel [PF07885.18, score=45.2]; Cyclic nucleotide-binding domain [PF00027.31, score=34.5]; PAS fold [PF08447.14, score=22.0]; PAS fold [PF00989.27, score=21.5]} {Human: ENSG00000183960, KCNH8, potassium voltage-gated channel subfamily H member 8, [RH, Score=542, Expect=1e-174]} {Mouse: ENSMUSG00000035580, Kcnh8, potassium voltage-gated channel, subfamily H (eag-related), member 8, [RH, Score=540, Expect=4e-174]; ENSMUSG00000037579, Kcnh3, potassium voltage-gated channel, subfamily H (eag-related), member 3, [RH, Score=513, Expect=7e-164]} {Dmel: FBgn0011589, Elk, Eag-like K[+] channel, [RH, Score=718, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [Score=412, Expect=8e-131]} {Smed: dd_Smed_v6_14863_0_2, dd_Smed_v6_14863_0_2, [Score=767, Expect=0.0]} {RNA1509_55158} {RNA1310_3235, RNA1509_55158} {RNA1509_55158, RNA815_4951.1}
2.	MligTC455_20231	57	1.19	Mlig455_053859	Neo: - Age: Down-Up-Up Regeneration-downregulated R4: -5.496 Regeneration-depleted R4: -5.496		0.998	-	-	0.998	-	-	-	Mlig455_053859 {REF} {Length: 4284} {RNA1509_19779} {RNA1310_3385} {RNA815_965}
3.	MligTC455_19083	43	0.9	Mlig455_058600	Neo: - Age: Up-Up-Down		0.997	-	-	0.997	-	-	-	Mlig455_058600 {REF} {Length: 1797} {NoTransDecoderORF} {RNA1509_49394} {RNA1310_30812, RNA1509_49394} {RNA1509_49394, RNA815_50223}
4.	MligTC455_06530	27	0.57	Mlig455_031177	Neo: - Age: - Region-enriched R4: 5.786/0.04241		0.988	-	-	0.988	-	-	-	Mlig455_031177 {REF} {Length: 488} {NoTransDecoderORF}
5.	MligTC455_29128	72	1.51	Mlig455_038660	Neo: - Age: - Region-enriched R2: 5.702/0.02667		0.988	-	-	0.988	-	-	-	Mlig455_038660 {REF} {Length: 401} {NoTransDecoderORF} {RNA1509_56566} {RNA1310_39137} {RNA815_43871}
6.	MligTC455_12124	22	0.46	Mlig455_008041	Neo: - Age: -	POMGNT1	0.984	-	-	0.984	-	-	-	Mlig455_008041 {REF} {Length: 1990} {Pfam: GNT-I family [PF03071.17, score=56.0]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [Score=192, Expect=1e-52]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [Score=192, Expect=5e-53]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=67.4, Expect=1e-11]} {Celegans: WBGene00019786, M70.4, [RH, Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_12622_0_1, dd_Smed_v6_12622_0_1, [Score=48.1, Expect=1e-05]} {RNA1509_56901} {RNA1310_37241.1} {RNA815_25346}
7.	MligTC455_29105	45	0.93	Mlig455_007483, Mlig455_012128, Mlig455_064550	Neo: - Age: -		0.974	-	-	0.974	-	-	-	Mlig455_007483 {REF} {Length: 115} {NoTransDecoderORF} {RNA1509_43734} {RNA1310_51856} Mlig455_012128 {REF} {Length: 3514} {TRANSSPLICED} {RNA1509_39872} {RNA1310_30293} {RNA815_50179} Mlig455_064550 {REF} {Length: 292} {NoTransDecoderORF} {RNA1509_39872} {RNA1310_30293}
8.	MligTC455_35089	36	0.75	Mlig455_017906	Neo: Int S/G2/M Age: Up-Down-Up Regeneration-upregulated R5: 6.095 Regeneration-enriched R5: 6.095		0.973	-	-	-	0.973	-	-	Mlig455_017906 {REF} {Length: 1284} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.3]; C2H2-type zinc finger [PF13894.8, score=49.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.1]; Zinc-finger of C2H2 type [PF12874.9, score=19.0]} {Mouse: ENSMUSG00000025602, Zfp202, zinc finger protein 202, [Score=53.1, Expect=4e-07]; ENSMUSG00000030380, Mzf1, myeloid zinc finger 1, [Score=50.8, Expect=2e-06]} {Dmel: FBgn0030240, CG2202, [Score=52.0, Expect=7e-07]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=53.9, Expect=1e-07]} {RNA1509_40803, RNA1509_53048} {RNA1310_18926, RNA1509_40803, RNA1509_53048} {RNA1509_40803, RNA1509_53048, RNA815_10511.1}
9.	MligTC455_33914	63	1.31	Mlig455_069339	Neo: - Age: -		0.964	-	-	0.964	-	-	-	Mlig455_069339 {REF} {Length: 2370} {Pfam: Spondin_N [PF06468.15, score=27.9]} {Dmel: FBgn0033710, CG17739, [Score=49.7, Expect=4e-06]} {RNA1310_29306} {RNA815_50316}
10.	MligTC455_47364	56	1.16	Mlig455_060227	Neo: - Age: -		0.962	-	-	0.962	-	-	-	Mlig455_060227 {REF} {Length: 2643} {TRANSSPLICED} {RNA1509_52272} {RNA1310_20343.2} {RNA815_28545}
11.	MligTC455_42012	50	1.04	Mlig455_066508	Neo: - Age: -	SEC23IP	0.958	-	-	0.958	-	-	-	Mlig455_066508 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: DDHD domain [PF02862.19, score=165.8]; SAM domain (Sterile alpha motif) [PF00536.32, score=28.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=23.5]} {Human: ENSG00000107651, SEC23IP, SEC23 interacting protein, [RH, Score=498, Expect=1e-162]; ENSG00000085788, DDHD2, DDHD domain containing 2, [RH, Score=485, Expect=4e-161]} {Mouse: ENSMUSG00000055319, Sec23ip, Sec23 interacting protein, [RH, Score=498, Expect=1e-162]; ENSMUSG00000061313, Ddhd2, DDHD domain containing 2, [RH, Score=478, Expect=1e-158]} {Dmel: FBgn0031990, PAPLA1, Phosphatidic Acid Phospholipase A1, [RH, Score=254, Expect=2e-74]} {Celegans: WBGene00019747, ipla-1, Intracelllar PhosphoLipase A family; Intracellular phospholipase A1, [Score=95.9, Expect=4e-20]} {Smed: dd_Smed_v6_4014_0_1, dd_Smed_v6_4014_0_1, [RH, Score=288, Expect=3e-83]} {RNA1509_38825} {RNA1310_9070.1} {RNA815_7099}
12.	MligTC455_07444	69	1.43	Mlig455_044739	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.842 Region-enriched R4: 4.220/0.00486		0.956	-	-	-	-	0.956	-	Mlig455_044739 {REF} {Length: 2756} {Pfam: Lectin C-type domain [PF00059.23, score=33.4]} {RNA1509_45595} {RNA1310_15100} {RNA815_7470.1}