Data search
Results for MligTC455_29156
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29156 | 91 | 1.90 | Mlig455_008644, Mlig455_039537, Mlig455_069412 | Neo: - Age: logFC(26M/2M)=-0.744 Region-enriched R4: 3.191/0.01054 |
Mlig455_008644 {REF} {Length: 1083} {TRANSSPLICED} {RNA1509_37249} {RNA1310_56218} {RNA815_37009} Mlig455_039537 {REF} {Length: 365} {NoTransDecoderORF} {RNA1509_53692} {RNA1310_56218} {RNA815_37009} Mlig455_069412 {REF} {Length: 1012} {TRANSSPLICED} {RNA1509_37249} {RNA1310_56218} {RNA815_37009} |
Cumulative graph for MligTC455_29156
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.186 | 1.76 | 0.17958 | 0.80820 | |
| RegionR2 | 0.879 | 1.76 | 0.52230 | 0.89613 | |
| RegionR3 | 1.707 | 1.76 | 0.15277 | 0.66143 | |
| RegionR4 | 3.191 | 1.76 | 0.00102 | 0.01054 | |
| RegionR5 | 0.359 | 1.76 | 0.75228 | 1.00000 | |
| RegionR6 | 0.785 | 1.76 | 0.55683 | 1.00000 | |
| RegionR7 | 1.238 | 1.76 | 0.38793 | 1.00000 | |
| RegionR8 | -1.974 | 1.76 | 0.99938 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.551 | 1.76 | 0.99997 | 1.00000 | |
| RegenerationR2 | -1.275 | 1.76 | 0.20732 | 0.65484 | |
| RegenerationR3 | -0.43 | 1.76 | 0.66268 | 0.93416 | |
| RegenerationR4 | -0.824 | 1.76 | 0.35569 | 0.78503 | |
| RegenerationR5 | 0.435 | 1.76 | 0.63161 | 0.92295 | |
| RegenerationR6 | 1.488 | 1.76 | 0.16039 | 0.48888 | |
| RegenerationBL | 1.463 | 1.76 | 0.25027 | 0.60636 | |
| RegenerationTP | 1.216 | 1.76 | 0.45251 | 0.86903 |
Genes with expression patterns similar to MligTC455_29156
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29156 | 91 | 1.9 | Mlig455_008644, Mlig455_039537, Mlig455_069412 | Neo: - Age: logFC(26M/2M)=-0.744 Region-enriched R4: 3.191/0.01054 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_008644 {REF} {Length: 1083} {TRANSSPLICED} {RNA1509_37249} {RNA1310_56218} {RNA815_37009} Mlig455_039537 {REF} {Length: 365} {NoTransDecoderORF} {RNA1509_53692} {RNA1310_56218} {RNA815_37009} Mlig455_069412 {REF} {Length: 1012} {TRANSSPLICED} {RNA1509_37249} {RNA1310_56218} {RNA815_37009} |
|
| 2. | MligTC455_37904 | 30 | 0.62 | Mlig455_020618 | Neo: - Age: - Region-enriched R4: 3.412/0.02257 |
0.976 | - | - | 0.976 | - | - | - | Mlig455_020618 {REF} {Length: 183} {NoTransDecoderORF} {RNA1310_48109} {RNA815_36337} | |
| 3. | MligTC455_34415 | 257 | 5.35 | Mlig455_004409 | Neo: - Age: - |
0.973 | - | - | - | - | 0.973 | - | Mlig455_004409 {REF} {Length: 2248} {RNA1509_21160} {RNA1310_6052} {RNA815_47286} | |
| 4. | MligTC455_37907 | 20 | 0.41 | Mlig455_053221 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_053221 {REF} {Length: 2536} {RNA1509_6302} {RNA1310_55549} {RNA815_60796} | |
| 5. | MligTC455_50000 | 222 | 4.62 | Mlig455_022111 | Neo: Germline Age: Up-Down-Down Region-specific R4: 3.841 Region-enriched R4: 1.956/0.04531 |
PCDH11X | 0.964 | - | - | 0.964 | - | - | - | Mlig455_022111 {REF} {Length: 5028} {Pfam: Cadherin domain [PF00028.19, score=302.2]; Cadherin-like [PF08266.14, score=49.3]; Cadherin-like [PF16184.7, score=29.4]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=300, Expect=1e-83]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=298, Expect=5e-83]; ENSG00000184226, PCDH9, protocadherin 9, [Score=285, Expect=6e-79]} {Mouse: ENSMUSG00000051323, Pcdh19, protocadherin 19, [RH, Score=274, Expect=7e-76]} {Dmel: FBgn0284247, ds, dachsous, [Score=246, Expect=9e-66]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=184, Expect=9e-47]} {Smed: dd_Smed_v6_14117_0_2, dd_Smed_v6_14117_0_2, [Score=385, Expect=1e-115]} {RNA1509_30226, RNA1509_40808} {RNA1310_15379, RNA1509_30226} {RNA1509_30226, RNA815_22718} |
| 6. | MligTC455_07498 | 16 | 0.33 | Mlig455_060982 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_060982 {REF} {Length: 433} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_69995} | |
| 7. | MligTC455_30133 | 50 | 1.05 | Mlig455_066762 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_066762 {REF} {Length: 2292} {Pfam: Domain of unknown function (DUF4072) [PF13284.8, score=21.5]} {RNA1509_23766} {RNA1310_81351} {RNA815_25702} | |
| 8. | MligTC455_49714 | 54 | 1.12 | Mlig455_003331 | Neo: - Age: - |
GALE | 0.954 | - | - | - | - | - | 0.954 | Mlig455_003331 {REF} {Length: 2262} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=199.0]; NAD dependent epimerase/dehydratase family [PF01370.23, score=182.7]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=63.2]; Polysaccharide biosynthesis protein [PF02719.17, score=62.3]; RmlD substrate binding domain [PF04321.19, score=50.2]; NAD(P)H-binding [PF13460.8, score=34.9]; Male sterility protein [PF07993.14, score=34.5]; short chain dehydrogenase [PF00106.27, score=30.5]; KR domain [PF08659.12, score=29.5]; NmrA-like family [PF05368.15, score=18.7]} {Human: ENSG00000117308, GALE, UDP-galactose-4-epimerase, [RH, Score=454, Expect=7e-161]} {Mouse: ENSMUSG00000028671, Gale, galactose-4-epimerase, UDP, [RH, Score=454, Expect=6e-161]} {Dmel: FBgn0035147, Gale, UDP-galactose 4'-epimerase, [RH, Score=429, Expect=4e-151]} {Celegans: WBGene00008132, gale-1, UDP-GALactose 4-Epimerase, [RH, Score=413, Expect=4e-145]} {Smed: dd_Smed_v6_1201_0_1, dd_Smed_v6_1201_0_1, [RH, Score=434, Expect=2e-153]} {RNA1509_23959} {RNA1310_16764.2} {RNA815_12053} |
| 9. | MligTC455_47764 | 44 | 0.92 | Mlig455_044544 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_044544 {REF} {Length: 4460} {RNA1509_51612} {RNA1310_8696} {RNA815_20831} | |
| 10. | MligTC455_51452 | 116 | 2.42 | Mlig455_059323 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_059323 {REF} {Length: 450} {NoTransDecoderORF} {RNA1509_51055} {RNA1310_86229.1} {RNA815_59589} |
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