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Results for MligTC455_51452

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51452 116 2.42 Mlig455_059323

Neo: -

Age: -

 Mlig455_059323 {REF} {Length: 450} {NoTransDecoderORF} {RNA1509_51055} {RNA1310_86229.1} {RNA815_59589}

Cumulative graph for MligTC455_51452

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.877 1.869 0.65793 1.00000
RegionR2 0.509 1.869 0.59017 0.94380
RegionR3 -1.1 1.869 0.16752 0.69058
RegionR4 -0.273 1.869 0.73964 1.00000
RegionR5 0.677 1.869 0.23624 0.54553
RegionR6 -0.532 1.869 0.50916 1.00000
RegionR7 0.054 1.869 0.95500 1.00000
RegionR8 -0.212 1.869 0.88959 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.42 1.869 0.46711 1.00000
RegenerationR2 -0.005 1.869 0.99380 1.00000
RegenerationR3 2.218 1.869 0.00905 0.17400
RegenerationR4 0.14 1.869 0.85792 1.00000
RegenerationR5 0.293 1.869 0.63889 0.92641
RegenerationR6 0.403 1.869 0.69779 0.92328
RegenerationBL 0.818 1.869 0.52160 0.88303
RegenerationTP 0.89 1.869 0.46301 0.87623


Genes with expression patterns similar to MligTC455_51452

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51452 116 2.42 Mlig455_059323

Neo: -

Age: -

 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_059323 {REF} {Length: 450} {NoTransDecoderORF} {RNA1509_51055} {RNA1310_86229.1} {RNA815_59589}
2. MligTC455_13636 272 5.66 Mlig455_051510, Mlig455_051549

Neo: -

Age: -

 CUEDC1 1.809 - 0.852 0.957 - - -

Mlig455_051510 {REF} {Length: 3096} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=35.6]} {Human: ENSG00000180891, CUEDC1, CUE domain containing 1, [RH, Score=65.5, Expect=1e-10]} {Mouse: ENSMUSG00000098571, Cuedc1, CUE domain containing 1, [RH, Score=67.0, Expect=2e-11]; ENSMUSG00000018378, Cuedc1, CUE domain containing 1, [RH, Score=67.0, Expect=2e-11]} {Celegans: WBGene00009649, F43C1.5, [RH, Score=48.5, Expect=4e-06]} {RNA1509_46938} {RNA1310_6206.1} {RNA815_13189}

Mlig455_051549 {REF} {Length: 3914} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=35.6]} {Human: ENSG00000180891, CUEDC1, CUE domain containing 1, [RH, Score=65.5, Expect=1e-10]} {Mouse: ENSMUSG00000018378, Cuedc1, CUE domain containing 1, [RH, Score=67.0, Expect=3e-11]; ENSMUSG00000098571, Cuedc1, CUE domain containing 1, [RH, Score=67.0, Expect=3e-11]} {Celegans: WBGene00009649, F43C1.5, [RH, Score=47.0, Expect=1e-05]} {RNA1509_46938, RNA1509_52331} {RNA1310_6206.1, RNA1509_46938, RNA1509_52331} {RNA1509_46938, RNA1509_52331, RNA815_13189}
3. MligTC455_39891 338 7.04 Mlig455_023376, Mlig455_046955

Neo: -

Age: -

 HIRA 1.706 - 0.951 - - - 0.755

Mlig455_023376 {REF} {Length: 3916} {TRANSSPLICED} {Pfam: TUP1-like enhancer of split [PF07569.13, score=92.1]; WD domain, G-beta repeat [PF00400.34, score=63.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.6]; HIRA B motif [PF09453.12, score=18.5]} {Human: ENSG00000100084, HIRA, histone cell cycle regulator, [Score=449, Expect=3e-140]} {Mouse: ENSMUSG00000022702, Hira, histone cell cycle regulator, [Score=433, Expect=9e-135]} {Dmel: FBgn0022786, Hira, [RH, Score=361, Expect=7e-108]} {Celegans: WBGene00019627, K10D2.1, Protein HIRA homolog, [RH, Score=216, Expect=5e-58]} {Smed: dd_Smed_v6_11365_0_1, dd_Smed_v6_11365_0_1, [RH, Score=292, Expect=1e-83]} {RNA1509_21457} {RNA1310_15050, RNA1509_21457} {RNA1509_21457, RNA815_26394}

Mlig455_046955 {REF} {Length: 3903} {TRANSSPLICED} {Pfam: TUP1-like enhancer of split [PF07569.13, score=95.6]; WD domain, G-beta repeat [PF00400.34, score=64.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.6]; HIRA B motif [PF09453.12, score=18.5]} {Human: ENSG00000100084, HIRA, histone cell cycle regulator, [RH, Score=452, Expect=8e-142]} {Mouse: ENSMUSG00000022702, Hira, histone cell cycle regulator, [Score=434, Expect=8e-135]} {Dmel: FBgn0022786, Hira, [RH, Score=364, Expect=5e-109]} {Celegans: WBGene00019627, K10D2.1, Protein HIRA homolog, [RH, Score=215, Expect=1e-57]} {Smed: dd_Smed_v6_11365_0_1, dd_Smed_v6_11365_0_1, [RH, Score=294, Expect=4e-84]} {RNA1509_21457, RNA1509_58633} {RNA1310_15050, RNA1509_58633} {RNA1509_58633, RNA815_26394}
4. MligTC455_48416 135 2.81 Mlig455_059481

Neo: -

Age: -

 TMEM74B 0.965 - - 0.965 - - - Mlig455_059481 {REF} {Length: 1441} {Pfam: Neurensin [PF14927.8, score=35.3]; Protein of unknown function (DUF3040) [PF11239.10, score=19.8]} {Human: ENSG00000125895, TMEM74B, transmembrane protein 74B, [Score=47.4, Expect=8e-07]} {Mouse: ENSMUSG00000044364, Tmem74b, transmembrane protein 74B, [Score=47.0, Expect=8e-07]} {RNA1509_33327} {RNA1310_52843} {RNA815_44553}
5. MligTC455_32075 440 9.16 Mlig455_018541

Neo: -

Age: -

 LIMD1 0.959 - - - - - 0.959 Mlig455_018541 {REF} {Length: 2943} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=90.3]} {Human: ENSG00000144791, LIMD1, LIM domains containing 1, [RH, Score=245, Expect=1e-73]; ENSG00000142279, WTIP, WT1 interacting protein, [RH, Score=238, Expect=3e-73]} {Mouse: ENSMUSG00000025239, Limd1, LIM domains containing 1, [RH, Score=245, Expect=7e-74]; ENSMUSG00000036459, Wtip, WT1-interacting protein, [RH, Score=234, Expect=2e-72]} {Dmel: FBgn0030530, jub, Ajuba LIM protein, [RH, Score=237, Expect=2e-70]} {Celegans: WBGene00006999, zyx-1, Zyxin, [RH, Score=164, Expect=2e-44]} {Smed: dd_Smed_v6_9489_0_2, dd_Smed_v6_9489_0_2, [RH, Score=209, Expect=3e-63]} {RNA1509_13676} {RNA1310_9185} {RNA815_7030}
6. MligTC455_31095 322 6.71 Mlig455_013789

Neo: -

Age: logFC(26M/2M)=0.396

Region-enriched R8: 3.245/0.00236

 TRPA1 0.954 - 0.954 - - - - Mlig455_013789 {REF} {Length: 4115} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=243.4]; Ankyrin repeats (many copies) [PF13637.8, score=217.2]; Ankyrin repeat [PF00023.32, score=188.8]; Ankyrin repeats (many copies) [PF13857.8, score=188.8]; Ankyrin repeat [PF13606.8, score=182.5]; Ion transport protein [PF00520.33, score=39.5]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=281, Expect=5e-78]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=265, Expect=7e-73]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=320, Expect=2e-91]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=269, Expect=4e-74]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=482, Expect=9e-152]} {RNA1509_56707, RNA1509_8449} {RNA1310_3264.1, RNA1509_56707, RNA1509_8449} {RNA1509_56707, RNA1509_8449, RNA815_808.1}
7. MligTC455_04064 58 1.21 Mlig455_032788

Neo: Germline

Age: -

 0.952 - 0.952 - - - - Mlig455_032788 {REF} {Length: 764} {NoTransDecoderORF} {RNA1310_95655}
8. MligTC455_38531 621 12.94 Mlig455_070506

Neo: -

Age: -

 SMARCA4 0.952 - - - - - 0.952 Mlig455_070506 {REF} {Length: 6540} {TRANSSPLICED} {Pfam: HSA [PF07529.15, score=48.3]; BRK domain [PF07533.18, score=44.8]; SNF2-related domain [PF00176.25, score=32.2]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=391, Expect=2e-117]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=387, Expect=3e-114]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=391, Expect=4e-115]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=388, Expect=3e-114]} {Dmel: FBgn0000212, brm, brahma, [Score=408, Expect=3e-121]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [Score=336, Expect=1e-96]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [Score=410, Expect=5e-123]} {RNA1509_2390} {RNA1310_6889} {RNA815_8843}
9. MligTC455_53734 59 1.23 Mlig455_055711

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}
10. MligTC455_27100 122 2.54 Mlig455_030113

Neo: -

Age: -

 URGCP 0.95 - 0.950 - - - - Mlig455_030113 {REF} {Length: 4646} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.3]; Mediator complex subunit 25 von Willebrand factor type A [PF11265.10, score=24.3]; Dynamin family [PF00350.25, score=23.2]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=22.0]; 50S ribosome-binding GTPase [PF01926.25, score=21.4]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=354, Expect=1e-101]; ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=353, Expect=1e-101]} {RNA1509_16396} {RNA1310_766.1} {RNA815_6560}
11. MligTC455_29156 91 1.9 Mlig455_008644, Mlig455_039537, Mlig455_069412

Neo: -

Age: logFC(26M/2M)=-0.744

Region-enriched R4: 3.191/0.01054

 0.95 - - 0.950 - - -

Mlig455_008644 {REF} {Length: 1083} {TRANSSPLICED} {RNA1509_37249} {RNA1310_56218} {RNA815_37009}

Mlig455_039537 {REF} {Length: 365} {NoTransDecoderORF} {RNA1509_53692} {RNA1310_56218} {RNA815_37009}

Mlig455_069412 {REF} {Length: 1012} {TRANSSPLICED} {RNA1509_37249} {RNA1310_56218} {RNA815_37009}

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