TomoSeq data search

Data search

Results for MligTC455_29340

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29340

215

4.49

Mlig455_045804

Neo: -

Age: Down-Up-Down

SIDT1

Mlig455_045804 {REF} {Length: 7995} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=364.2]} {Human: ENSG00000072858, SIDT1, SID1 transmembrane family member 1, [Score=243, Expect=1e-68]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=228, Expect=2e-63]; ENSMUSG00000034908, Sidt2, SID1 transmembrane family, member 2, [Score=221, Expect=7e-61]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [Score=203, Expect=3e-55]} {Smed: dd_Smed_v6_6063_0_2, dd_Smed_v6_6063_0_2, [Score=231, Expect=5e-65]} {RNA1509_21798, RNA1509_22787} {RNA1310_927.1, RNA1509_21798, RNA1509_22787} {RNA1509_21798, RNA1509_22787, RNA815_827}

Cumulative graph for MligTC455_29340

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.785	2.645	0.64636	1.00000
RegionR2	1.046	2.645	0.17801	0.52753
RegionR3	-0.298	2.645	0.68463	1.00000
RegionR4	-0.468	2.645	0.55871	0.87857
RegionR5	-0.447	2.645	0.49968	0.86271
RegionR6	-1.476	2.645	0.09012	0.55253
RegionR7	-0.519	2.645	0.65428	1.00000
RegionR8	1.376	2.645	0.19713	0.79370

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.021	2.645	0.24573	0.96633
RegenerationR2	-0.031	2.645	0.95596	1.00000
RegenerationR3	1.171	2.645	0.13436	0.55807
RegenerationR4	1.699	2.645	0.02421	0.24875
RegenerationR5	0.856	2.645	0.24670	0.68009
RegenerationR6	2.28	2.645	0.01092	0.12912
RegenerationBL	1.906	2.645	0.01663	0.13706
RegenerationTP	1.391	2.645	0.12745	0.53970

Genes with expression patterns similar to MligTC455_29340

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29340	215	4.49	Mlig455_045804	Neo: - Age: Down-Up-Down	SIDT1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_045804 {REF} {Length: 7995} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=364.2]} {Human: ENSG00000072858, SIDT1, SID1 transmembrane family member 1, [Score=243, Expect=1e-68]} {Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=228, Expect=2e-63]; ENSMUSG00000034908, Sidt2, SID1 transmembrane family, member 2, [Score=221, Expect=7e-61]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [Score=203, Expect=3e-55]} {Smed: dd_Smed_v6_6063_0_2, dd_Smed_v6_6063_0_2, [Score=231, Expect=5e-65]} {RNA1509_21798, RNA1509_22787} {RNA1310_927.1, RNA1509_21798, RNA1509_22787} {RNA1509_21798, RNA1509_22787, RNA815_827}
2.	MligTC455_13322	348	7.26	Mlig455_045509	Neo: - Age: Up-Down-Up		0.963	-	-	-	-	-	0.963	Mlig455_045509 {REF} {Length: 2060} {RNA1509_43769} {RNA1310_13950} {RNA815_5909}
3.	MligTC455_13321	258	5.38	Mlig455_045501	Neo: - Age: Down-Down-Up		0.955	-	-	-	-	-	0.955	Mlig455_045501 {REF} {Length: 2006} {RNA1509_43769} {RNA1310_13950, RNA1509_43769} {RNA1509_43769, RNA815_5909}
4.	MligTC455_40734	722	15.04	Mlig455_038758	Neo: - Age: -	BAG6	0.954	-	-	-	0.954	-	-	Mlig455_038758 {REF} {Length: 3599} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=53.4]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=33.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=31.1]; Protein of unknown function (DUF2722) [PF10846.10, score=27.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.8]} {Human: ENSG00000233348, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000204463, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000228760, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000227761, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000096155, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000234651, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000229524, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]} {Mouse: ENSMUSG00000024392, Bag6, BCL2-associated athanogene 6, [RH, Score=77.4, Expect=2e-16]} {Dmel: FBgn0035793, CG7546, [RH, Score=65.5, Expect=2e-10]} {Smed: dd_Smed_v6_1102_0_1, dd_Smed_v6_1102_0_1, [RH, Score=121, Expect=8e-28]} {RNA1509_17545, RNA1509_37191} {RNA1310_3107.1, RNA1509_37191} {RNA1509_37191, RNA815_4886}
5.	MligTC455_17408	421	8.78	Mlig455_012190	Neo: Int S/G2/M Age: logFC(26M/2M)=0.351 Region-enriched R4: 3.528/0.00000 Region-enriched R5: 2.363/0.00037	TMEM56	0.951	-	-	-	0.951	-	-	Mlig455_012190 {REF} {Length: 1503} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=83.5]} {Human: ENSG00000152078, TMEM56, transmembrane protein 56, [RH, Score=87.4, Expect=8e-20]} {Mouse: ENSMUSG00000028132, Tmem56, transmembrane protein 56, [Score=100, Expect=9e-25]} {Smed: dd_Smed_v6_10262_0_1, dd_Smed_v6_10262_0_1, [Score=84.0, Expect=1e-18]} {RNA1509_23853, RNA1509_52773, RNA1509_58140} {RNA1310_7508, RNA1509_52773, RNA1509_58140} {RNA1509_52773, RNA1509_58140, RNA815_176.1}
6.	MligTC455_16731	2084	43.42	Mlig455_021681	Neo: - Age: -	CYB561	0.95	-	-	-	0.950	-	-	Mlig455_021681 {REF} {Length: 1741} {TRANSSPLICED} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=64.9]} {Human: ENSG00000008283, CYB561, cytochrome b561, [Score=92.0, Expect=3e-24]} {Mouse: ENSMUSG00000019590, Cyb561, cytochrome b-561, [Score=84.3, Expect=4e-21]} {Dmel: FBgn0035321, CG1275, [Score=90.1, Expect=7e-23]} {Celegans: WBGene00010131, F55H2.5, Putative cytochrome b561, [Score=102, Expect=2e-27]} {Smed: dd_Smed_v6_4017_0_1, dd_Smed_v6_4017_0_1, [Score=97.4, Expect=8e-26]} {RNA1509_4623} {RNA1310_20415.2} {RNA815_11404}

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