Data search
Results for MligTC455_29357
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29357 | 414 | 8.63 | Mlig455_047924 | Neo: - Age: Up-Up-Down |
TRIM3 | Mlig455_047924 {REF} {Length: 6288} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=90.2]; B-box zinc finger [PF00643.26, score=42.4]; RING-type zinc-finger [PF13445.8, score=25.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=22.4]; 6-bladed beta-propeller [PF17170.6, score=20.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=18.9]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=128, Expect=5e-30]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=128, Expect=8e-30]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=466, Expect=2e-146]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=229, Expect=4e-63]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414} {RNA1310_9506.1, RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414} {RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414, RNA815_13729.1} |
Cumulative graph for MligTC455_29357
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.591 | 3.505 | 0.58730 | 1.00000 | |
| RegionR2 | -0.136 | 3.505 | 0.80782 | 1.00000 | |
| RegionR3 | -0.231 | 3.505 | 0.58688 | 1.00000 | |
| RegionR4 | -0.376 | 3.505 | 0.43367 | 0.76257 | |
| RegionR5 | 0.33 | 3.505 | 0.34044 | 0.68753 | |
| RegionR6 | 0.309 | 3.505 | 0.44621 | 1.00000 | |
| RegionR7 | -0.322 | 3.505 | 0.63680 | 1.00000 | |
| RegionR8 | -0.165 | 3.505 | 0.84864 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.655 | 3.505 | 0.63749 | 1.00000 | |
| RegenerationR2 | 0.29 | 3.505 | 0.52505 | 0.88186 | |
| RegenerationR3 | 0.649 | 3.505 | 0.16567 | 0.59985 | |
| RegenerationR4 | 0.577 | 3.505 | 0.19892 | 0.64475 | |
| RegenerationR5 | 0.738 | 3.505 | 0.04861 | 0.35715 | |
| RegenerationR6 | 0.792 | 3.505 | 0.07257 | 0.33657 | |
| RegenerationBL | 0.668 | 3.505 | 0.29272 | 0.65492 | |
| RegenerationTP | 0.216 | 3.505 | 0.77673 | 1.00000 |
Genes with expression patterns similar to MligTC455_29357
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29357 | 414 | 8.63 | Mlig455_047924 | Neo: - Age: Up-Up-Down |
TRIM3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047924 {REF} {Length: 6288} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=90.2]; B-box zinc finger [PF00643.26, score=42.4]; RING-type zinc-finger [PF13445.8, score=25.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=22.4]; 6-bladed beta-propeller [PF17170.6, score=20.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=18.9]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=128, Expect=5e-30]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=128, Expect=8e-30]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=466, Expect=2e-146]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=229, Expect=4e-63]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414} {RNA1310_9506.1, RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414} {RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414, RNA815_13729.1} |
| 2. | MligTC455_48111 | 1192 | 24.84 | Mlig455_003138 | Neo: Int S/G2/M Age: - |
CNOT7 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_003138 {REF} {Length: 3134} {TRANSSPLICED} {Pfam: CAF1 family ribonuclease [PF04857.22, score=70.6]} {Human: ENSG00000198791, CNOT7, CCR4-NOT transcription complex subunit 7, [RH, Score=270, Expect=1e-89]; ENSG00000155508, CNOT8, CCR4-NOT transcription complex subunit 8, [RH, Score=266, Expect=6e-88]} {Mouse: ENSMUSG00000031601, Cnot7, CCR4-NOT transcription complex, subunit 7, [RH, Score=270, Expect=9e-90]; ENSMUSG00000020515, Cnot8, CCR4-NOT transcription complex, subunit 8, [RH, Score=266, Expect=4e-88]} {Dmel: FBgn0036239, Pop2, [RH, Score=277, Expect=2e-92]} {Celegans: WBGene00000369, ccf-1, CCR4-NOT transcription complex subunit 7, [RH, Score=189, Expect=4e-58]} {Smed: dd_Smed_v6_10225_0_1, dd_Smed_v6_10225_0_1, [RH, Score=266, Expect=2e-86]} {RNA1509_11515, RNA1509_15417, RNA1509_20534, RNA1509_35734, RNA1509_38866, RNA1509_53668} {RNA1310_20569.1, RNA1509_11515, RNA1509_15417, RNA1509_20534, RNA1509_35734, RNA1509_38866, RNA1509_53668} {RNA1509_11515, RNA1509_15417, RNA1509_20534, RNA1509_35734, RNA1509_38866, RNA1509_53668, RNA815_9569} |
| 3. | MligTC455_49348 | 106 | 2.22 | Mlig455_042275 | Neo: - Age: - |
0.967 | - | - | - | 0.967 | - | - | Mlig455_042275 {REF} {Length: 1278} {NoTransDecoderORF} {RNA1509_58228} {RNA1310_48769.2} {RNA815_29333} | |
| 4. | MligTC455_17198 | 464 | 9.66 | Mlig455_050496 | Neo: - Age: - |
RTEL1 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_050496 {REF} {Length: 4360} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=191.2]; DEAD_2 [PF06733.17, score=170.8]; Type III restriction enzyme, res subunit [PF04851.17, score=25.9]; DEAD/DEAH box helicase [PF00270.31, score=20.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=18.9]} {Human: ENSG00000258366, RTEL1, regulator of telomere elongation helicase 1, [RH, Score=628, Expect=0.0]} {Mouse: ENSMUSG00000038685, Rtel1, regulator of telomere elongation helicase 1, [RH, Score=632, Expect=0.0]} {Dmel: FBgn0029798, CG4078, [RH, Score=588, Expect=0.0]} {Celegans: WBGene00009124, rtel-1, Regulator of telomere elongation helicase 1 homolog, [Score=430, Expect=4e-132]} {Smed: dd_Smed_v6_12261_0_1, dd_Smed_v6_12261_0_1, [RH, Score=607, Expect=0.0]} {RNA1509_13087} {RNA1310_1915, RNA1509_13087} {RNA1509_13087, RNA815_13398} |
| 5. | MligTC455_11802 | 214 | 4.45 | Mlig455_002601 | Neo: Int S/G2/M Age: - |
0.961 | - | - | - | 0.961 | - | - | Mlig455_002601 {REF} {Length: 2904} {TRANSSPLICED} {Smed: dd_Smed_v6_2756_0_1, dd_Smed_v6_2756_0_1, [RH, Score=55.8, Expect=4e-08]} {RNA1509_17455} {RNA1310_8401.1} {RNA815_22037} | |
| 6. | MligTC455_45040 | 558 | 11.63 | Mlig455_030496 | Neo: - Age: - |
MMAA | 0.958 | - | - | - | 0.958 | - | - | Mlig455_030496 {REF} {Length: 2382} {TRANSSPLICED} {Pfam: Methylmalonyl Co-A mutase-associated GTPase MeaB [PF03308.18, score=304.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=29.8]} {Human: ENSG00000151611, MMAA, methylmalonic aciduria (cobalamin deficiency) cblA type, [RH, Score=303, Expect=5e-100]} {Mouse: ENSMUSG00000037022, Mmaa, methylmalonic aciduria (cobalamin deficiency) type A, [RH, Score=315, Expect=9e-105]} {Celegans: WBGene00020169, mmaa-1, Methylmalonic aciduria type A homolog, mitochondrial, [RH, Score=337, Expect=1e-113]} {Smed: dd_Smed_v6_7238_0_1, dd_Smed_v6_7238_0_1, [RH, Score=310, Expect=9e-104]} {RNA1509_15100, RNA1509_18380, RNA1509_44023, RNA1509_6618} {RNA1310_14903.1, RNA1509_15100, RNA1509_18380, RNA1509_44023, RNA1509_6618} {RNA1509_15100, RNA1509_18380, RNA1509_44023, RNA1509_6618, RNA815_10061} |
| 7. | MligTC455_41857 | 148 | 3.08 | Mlig455_037828 | Neo: - |
BRD8 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_037828 {REF} {Length: 2010} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=33.1]} {Human: ENSG00000112983, BRD8, bromodomain containing 8, [Score=69.3, Expect=9e-12]} {Mouse: ENSMUSG00000003778, Brd8, bromodomain containing 8, [Score=69.3, Expect=7e-12]} {Dmel: FBgn0050417, tbrd-3, testis-specifically expressed bromodomain containing protein-3, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_10362_1_1, dd_Smed_v6_10362_1_1, [RH, Score=57.0, Expect=1e-08]} {RNA1509_27181} {RNA1310_17527} {RNA815_26572} |
| 8. | MligTC455_29424 | 1655 | 34.49 | Mlig455_024008 | Neo: - Age: Up-Down-Down Regeneration-upregulated R6: 1.784 Regeneration-enriched R6: 1.784 |
GCN1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_024008 {REF} {Length: 9722} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=110.6]; CLASP N terminal [PF12348.10, score=75.8]; HEAT repeats [PF13646.8, score=72.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=50.3]; Vacuolar 14 Fab1-binding region [PF12755.9, score=42.7]; RNAPII transcription regulator C-terminal [PF12460.10, score=38.3]; Integrase zinc binding domain [PF17921.3, score=30.8]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=27.1]; HEAT-like repeat [PF13513.8, score=24.3]; Adaptin N terminal region [PF01602.22, score=23.1]; Dopey, N-terminal [PF04118.16, score=21.3]; UME (NUC010) domain [PF08064.15, score=21.3]} {Human: ENSG00000089154, GCN1, GCN1, eIF2 alpha kinase activator homolog, [RH, Score=1226, Expect=0.0]} {Mouse: ENSMUSG00000041638, Gcn1l1, GCN1 general control of amino-acid synthesis 1-like 1 (yeast), [RH, Score=1285, Expect=0.0]} {Dmel: FBgn0039959, CG17514, [RH, Score=1231, Expect=0.0]} {Celegans: WBGene00021697, gcn-1, GCN (Yeast General Control Nondrepressible) homolog, [RH, Score=926, Expect=0.0]} {Smed: dd_Smed_v6_3929_0_1, dd_Smed_v6_3929_0_1, [RH, Score=937, Expect=0.0]} {RNA1509_2095} {RNA1310_102.1} {RNA815_83} |
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