Data search
Results for MligTC455_29424
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29424 | 1655 | 34.49 | Mlig455_024008 | Neo: - Age: Up-Down-Down Regeneration-upregulated R6: 1.784 Regeneration-enriched R6: 1.784 |
GCN1 | Mlig455_024008 {REF} {Length: 9722} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=110.6]; CLASP N terminal [PF12348.10, score=75.8]; HEAT repeats [PF13646.8, score=72.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=50.3]; Vacuolar 14 Fab1-binding region [PF12755.9, score=42.7]; RNAPII transcription regulator C-terminal [PF12460.10, score=38.3]; Integrase zinc binding domain [PF17921.3, score=30.8]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=27.1]; HEAT-like repeat [PF13513.8, score=24.3]; Adaptin N terminal region [PF01602.22, score=23.1]; Dopey, N-terminal [PF04118.16, score=21.3]; UME (NUC010) domain [PF08064.15, score=21.3]} {Human: ENSG00000089154, GCN1, GCN1, eIF2 alpha kinase activator homolog, [RH, Score=1226, Expect=0.0]} {Mouse: ENSMUSG00000041638, Gcn1l1, GCN1 general control of amino-acid synthesis 1-like 1 (yeast), [RH, Score=1285, Expect=0.0]} {Dmel: FBgn0039959, CG17514, [RH, Score=1231, Expect=0.0]} {Celegans: WBGene00021697, gcn-1, GCN (Yeast General Control Nondrepressible) homolog, [RH, Score=926, Expect=0.0]} {Smed: dd_Smed_v6_3929_0_1, dd_Smed_v6_3929_0_1, [RH, Score=937, Expect=0.0]} {RNA1509_2095} {RNA1310_102.1} {RNA815_83} |
Cumulative graph for MligTC455_29424
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.465 | 5.256 | 0.18477 | 0.81476 | |
| RegionR2 | 0.822 | 5.256 | 0.10180 | 0.39285 | |
| RegionR3 | 0.081 | 5.256 | 0.83937 | 1.00000 | |
| RegionR4 | -0.081 | 5.256 | 0.86363 | 1.00000 | |
| RegionR5 | 0.726 | 5.256 | 0.04152 | 0.16387 | |
| RegionR6 | -0.005 | 5.256 | 0.99250 | 1.00000 | |
| RegionR7 | 0.428 | 5.256 | 0.38226 | 1.00000 | |
| RegionR8 | -0.506 | 5.256 | 0.48319 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.443 | 5.256 | 0.00324 | 0.29188 | |
| RegenerationR2 | 0.535 | 5.256 | 0.21691 | 0.66404 | |
| RegenerationR3 | 1.25 | 5.256 | 0.00914 | 0.17470 | |
| RegenerationR4 | 0.919 | 5.256 | 0.05395 | 0.37321 | |
| RegenerationR5 | 0.462 | 5.256 | 0.29432 | 0.72212 | |
| RegenerationR6 | 1.784 | 5.256 | 0.00010 | 0.00906 | Specific for R6: 1.784 |
| RegenerationBL | 1.356 | 5.256 | 0.00565 | 0.07113 | |
| RegenerationTP | 0.026 | 5.256 | 0.96606 | 1.00000 |
Genes with expression patterns similar to MligTC455_29424
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29424 | 1655 | 34.49 | Mlig455_024008 | Neo: - Age: Up-Down-Down Regeneration-upregulated R6: 1.784 Regeneration-enriched R6: 1.784 |
GCN1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024008 {REF} {Length: 9722} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=110.6]; CLASP N terminal [PF12348.10, score=75.8]; HEAT repeats [PF13646.8, score=72.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=50.3]; Vacuolar 14 Fab1-binding region [PF12755.9, score=42.7]; RNAPII transcription regulator C-terminal [PF12460.10, score=38.3]; Integrase zinc binding domain [PF17921.3, score=30.8]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=27.1]; HEAT-like repeat [PF13513.8, score=24.3]; Adaptin N terminal region [PF01602.22, score=23.1]; Dopey, N-terminal [PF04118.16, score=21.3]; UME (NUC010) domain [PF08064.15, score=21.3]} {Human: ENSG00000089154, GCN1, GCN1, eIF2 alpha kinase activator homolog, [RH, Score=1226, Expect=0.0]} {Mouse: ENSMUSG00000041638, Gcn1l1, GCN1 general control of amino-acid synthesis 1-like 1 (yeast), [RH, Score=1285, Expect=0.0]} {Dmel: FBgn0039959, CG17514, [RH, Score=1231, Expect=0.0]} {Celegans: WBGene00021697, gcn-1, GCN (Yeast General Control Nondrepressible) homolog, [RH, Score=926, Expect=0.0]} {Smed: dd_Smed_v6_3929_0_1, dd_Smed_v6_3929_0_1, [RH, Score=937, Expect=0.0]} {RNA1509_2095} {RNA1310_102.1} {RNA815_83} |
| 2. | MligTC455_29425 | 1662 | 34.63 | Mlig455_024071 | Neo: - Age: - Regeneration-upregulated R6: 1.829 Regeneration-enriched R6: 1.829 |
GCN1 | 5.942 | 0.999 | 0.997 | 0.996 | 0.992 | 0.992 | 0.966 | Mlig455_024071 {REF} {Length: 8504} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=109.6]; CLASP N terminal [PF12348.10, score=75.9]; HEAT repeats [PF13646.8, score=72.0]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=49.6]; Vacuolar 14 Fab1-binding region [PF12755.9, score=44.4]; RNAPII transcription regulator C-terminal [PF12460.10, score=38.0]; UME (NUC010) domain [PF08064.15, score=30.4]; HEAT-like repeat [PF13513.8, score=29.4]; Dopey, N-terminal [PF04118.16, score=22.0]; Adaptin N terminal region [PF01602.22, score=21.9]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=21.1]} {Human: ENSG00000089154, GCN1, GCN1, eIF2 alpha kinase activator homolog, [Score=1230, Expect=0.0]} {Mouse: ENSMUSG00000041638, Gcn1l1, GCN1 general control of amino-acid synthesis 1-like 1 (yeast), [RH, Score=1322, Expect=0.0]} {Dmel: FBgn0039959, CG17514, [RH, Score=1229, Expect=0.0]} {Celegans: WBGene00021697, gcn-1, GCN (Yeast General Control Nondrepressible) homolog, [RH, Score=919, Expect=0.0]} {Smed: dd_Smed_v6_3929_0_1, dd_Smed_v6_3929_0_1, [RH, Score=937, Expect=0.0]} {RNA1509_2095, RNA1509_21822, RNA1509_24849, RNA1509_9007} {RNA1310_102.1, RNA1509_21822, RNA1509_24849, RNA1509_9007} {RNA1509_21822, RNA1509_24849, RNA1509_9007, RNA815_83} |
| 3. | MligTC455_19458 | 1300 | 27.09 | Mlig455_007643 | Neo: - Age: logFC(26M/2M)=0.891 |
ATP6AP2 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_007643 {REF} {Length: 3965} {Pfam: Renin receptor-like protein [PF07850.16, score=80.6]} {Human: ENSG00000182220, ATP6AP2, ATPase H+ transporting accessory protein 2, [RH, Score=73.2, Expect=3e-14]} {Mouse: ENSMUSG00000031007, Atp6ap2, ATPase, H+ transporting, lysosomal accessory protein 2, [RH, Score=73.6, Expect=3e-14]} {Dmel: FBgn0037671, VhaM8.9, Vacuolar H[+] ATPase M8.9 accessory subunit, [RH, Score=67.0, Expect=3e-12]} {Celegans: WBGene00010993, vha-20, Vacuolar H ATPase, [RH, Score=56.2, Expect=1e-08]} {Smed: dd_Smed_v6_1067_0_1, dd_Smed_v6_1067_0_1, [RH, Score=77.8, Expect=2e-18]} {RNA1509_44098} {RNA1310_8954} {RNA815_3484.1} |
| 4. | MligTC455_29357 | 414 | 8.63 | Mlig455_047924 | Neo: - Age: Up-Up-Down |
TRIM3 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_047924 {REF} {Length: 6288} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=90.2]; B-box zinc finger [PF00643.26, score=42.4]; RING-type zinc-finger [PF13445.8, score=25.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=22.4]; 6-bladed beta-propeller [PF17170.6, score=20.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=18.9]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=128, Expect=5e-30]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=128, Expect=8e-30]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=466, Expect=2e-146]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=229, Expect=4e-63]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414} {RNA1310_9506.1, RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414} {RNA1509_10636, RNA1509_19977, RNA1509_38408, RNA1509_39131, RNA1509_7414, RNA815_13729.1} |
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