Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_29375 | 1793 | 37.35 | Mlig455_005038, Mlig455_005079 | Neo: - Age: - |
YTHDF2 | Mlig455_005038 {REF} {Length: 3550} {TRANSSPLICED} {Pfam: YT521-B-like domain [PF04146.17, score=132.5]} {Human: ENSG00000198492, YTHDF2, YTH N6-methyladenosine RNA binding protein 2, [RH, Score=248, Expect=2e-75]; ENSG00000149658, YTHDF1, YTH N6-methyladenosine RNA binding protein 1, [RH, Score=240, Expect=2e-72]; ENSG00000185728, YTHDF3, YTH N6-methyladenosine RNA binding protein 3, [RH, Score=237, Expect=2e-71]} {Mouse: ENSMUSG00000040025, Ythdf2, YTH N6-methyladenosine RNA binding protein 2, [RH, Score=248, Expect=3e-75]; ENSMUSG00000038848, Ythdf1, YTH N6-methyladenosine RNA binding protein 1, [RH, Score=245, Expect=2e-74]; ENSMUSG00000047213, Ythdf3, YTH N6-methyladenosine RNA binding protein 3, [RH, Score=238, Expect=4e-71]} {Dmel: FBgn0039261, CG6422, [RH, Score=238, Expect=1e-70]} {Smed: dd_Smed_v6_7891_0_1, dd_Smed_v6_7891_0_1, [RH, Score=229, Expect=3e-69]} {RNA1509_11375, RNA1509_59510} {RNA1310_10049, RNA1509_11375, RNA1509_59510} {RNA1509_11375, RNA1509_59510, RNA815_13801} Mlig455_005079 {REF} {Length: 4171} {TRANSSPLICED} {Pfam: YT521-B-like domain [PF04146.17, score=132.7]} {Human: ENSG00000198492, YTHDF2, YTH N6-methyladenosine RNA binding protein 2, [RH, Score=248, Expect=5e-75]; ENSG00000149658, YTHDF1, YTH N6-methyladenosine RNA binding protein 1, [RH, Score=240, Expect=2e-72]; ENSG00000185728, YTHDF3, YTH N6-methyladenosine RNA binding protein 3, [RH, Score=237, Expect=3e-71]} {Mouse: ENSMUSG00000040025, Ythdf2, YTH N6-methyladenosine RNA binding protein 2, [RH, Score=248, Expect=3e-75]; ENSMUSG00000038848, Ythdf1, YTH N6-methyladenosine RNA binding protein 1, [RH, Score=245, Expect=3e-74]; ENSMUSG00000047213, Ythdf3, YTH N6-methyladenosine RNA binding protein 3, [RH, Score=237, Expect=4e-71]} {Dmel: FBgn0039261, CG6422, [RH, Score=238, Expect=2e-70]} {Smed: dd_Smed_v6_7891_0_1, dd_Smed_v6_7891_0_1, [RH, Score=229, Expect=3e-69]} {RNA1509_11375, RNA1509_22293, RNA1509_35748, RNA1509_42189, RNA1509_53677} {RNA1310_10049, RNA1509_22293, RNA1509_35748, RNA1509_42189, RNA1509_53677} {RNA1509_22293, RNA1509_35748, RNA1509_42189, RNA1509_53677, RNA815_13801} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.205 | 5.455 | 0.77360 | 1.00000 | |
RegionR2 | -0.127 | 5.455 | 0.72837 | 1.00000 | |
RegionR3 | -0.142 | 5.455 | 0.63989 | 1.00000 | |
RegionR4 | 0.778 | 5.455 | 0.03556 | 0.15310 | |
RegionR5 | -0.106 | 5.455 | 0.71515 | 1.00000 | |
RegionR6 | -0.105 | 5.455 | 0.73678 | 1.00000 | |
RegionR7 | 0.045 | 5.455 | 0.89687 | 1.00000 | |
RegionR8 | -0.138 | 5.455 | 0.73093 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -8.088 | 5.455 | 0.01308 | 0.48870 | |
RegenerationR2 | -0.08 | 5.455 | 0.81731 | 0.99449 | |
RegenerationR3 | 0.199 | 5.455 | 0.59288 | 0.90474 | |
RegenerationR4 | -0.311 | 5.455 | 0.42942 | 0.83023 | |
RegenerationR5 | 0.421 | 5.455 | 0.23607 | 0.66983 | |
RegenerationR6 | 0.298 | 5.455 | 0.41905 | 0.75021 | |
RegenerationBL | -1.192 | 5.455 | 0.00743 | 0.08394 | |
RegenerationTP | 0.114 | 5.455 | 0.77718 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_29375 | 1793 | 37.35 | Mlig455_005038, Mlig455_005079 | Neo: - Age: - |
YTHDF2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005038 {REF} {Length: 3550} {TRANSSPLICED} {Pfam: YT521-B-like domain [PF04146.17, score=132.5]} {Human: ENSG00000198492, YTHDF2, YTH N6-methyladenosine RNA binding protein 2, [RH, Score=248, Expect=2e-75]; ENSG00000149658, YTHDF1, YTH N6-methyladenosine RNA binding protein 1, [RH, Score=240, Expect=2e-72]; ENSG00000185728, YTHDF3, YTH N6-methyladenosine RNA binding protein 3, [RH, Score=237, Expect=2e-71]} {Mouse: ENSMUSG00000040025, Ythdf2, YTH N6-methyladenosine RNA binding protein 2, [RH, Score=248, Expect=3e-75]; ENSMUSG00000038848, Ythdf1, YTH N6-methyladenosine RNA binding protein 1, [RH, Score=245, Expect=2e-74]; ENSMUSG00000047213, Ythdf3, YTH N6-methyladenosine RNA binding protein 3, [RH, Score=238, Expect=4e-71]} {Dmel: FBgn0039261, CG6422, [RH, Score=238, Expect=1e-70]} {Smed: dd_Smed_v6_7891_0_1, dd_Smed_v6_7891_0_1, [RH, Score=229, Expect=3e-69]} {RNA1509_11375, RNA1509_59510} {RNA1310_10049, RNA1509_11375, RNA1509_59510} {RNA1509_11375, RNA1509_59510, RNA815_13801} Mlig455_005079 {REF} {Length: 4171} {TRANSSPLICED} {Pfam: YT521-B-like domain [PF04146.17, score=132.7]} {Human: ENSG00000198492, YTHDF2, YTH N6-methyladenosine RNA binding protein 2, [RH, Score=248, Expect=5e-75]; ENSG00000149658, YTHDF1, YTH N6-methyladenosine RNA binding protein 1, [RH, Score=240, Expect=2e-72]; ENSG00000185728, YTHDF3, YTH N6-methyladenosine RNA binding protein 3, [RH, Score=237, Expect=3e-71]} {Mouse: ENSMUSG00000040025, Ythdf2, YTH N6-methyladenosine RNA binding protein 2, [RH, Score=248, Expect=3e-75]; ENSMUSG00000038848, Ythdf1, YTH N6-methyladenosine RNA binding protein 1, [RH, Score=245, Expect=3e-74]; ENSMUSG00000047213, Ythdf3, YTH N6-methyladenosine RNA binding protein 3, [RH, Score=237, Expect=4e-71]} {Dmel: FBgn0039261, CG6422, [RH, Score=238, Expect=2e-70]} {Smed: dd_Smed_v6_7891_0_1, dd_Smed_v6_7891_0_1, [RH, Score=229, Expect=3e-69]} {RNA1509_11375, RNA1509_22293, RNA1509_35748, RNA1509_42189, RNA1509_53677} {RNA1310_10049, RNA1509_22293, RNA1509_35748, RNA1509_42189, RNA1509_53677} {RNA1509_22293, RNA1509_35748, RNA1509_42189, RNA1509_53677, RNA815_13801} |
2. | MligTC455_33341 | 1458 | 30.37 | Mlig455_032573 | Neo: - Age: Up-Down-Down |
CBL | 2.527 | - | - | - | 0.772 | 0.804 | 0.951 | Mlig455_032573 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: CBL proto-oncogene N-terminus, EF hand-like domain [PF02761.16, score=106.4]; CBL proto-oncogene N-terminus, SH2-like domain [PF02762.16, score=92.4]; CBL proto-oncogene N-terminal domain 1 [PF02262.18, score=72.7]; Prokaryotic RING finger family 4 [PF14447.8, score=49.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=42.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.8]; Ring finger domain [PF13639.8, score=28.3]; RING-type zinc-finger [PF13445.8, score=25.7]; zinc-RING finger domain [PF14634.8, score=20.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=18.8]} {Human: ENSG00000110395, CBL, Cbl proto-oncogene, [Score=342, Expect=8e-108]; ENSG00000114423, CBLB, Cbl proto-oncogene B, [Score=337, Expect=1e-105]} {Mouse: ENSMUSG00000034342, Cbl, Casitas B-lineage lymphoma, [Score=344, Expect=2e-108]; ENSMUSG00000022637, Cblb, Casitas B-lineage lymphoma b, [Score=337, Expect=2e-105]} {Dmel: FBgn0020224, Cbl, Cbl proto-oncogene, [Score=325, Expect=3e-106]} {Celegans: WBGene00004829, sli-1, Sli-1 protein; Suppressor of LIneage defect, [Score=289, Expect=2e-91]} {Smed: dd_Smed_v6_6780_0_1, dd_Smed_v6_6780_0_1, [Score=281, Expect=4e-88]} {RNA1509_11760, RNA1509_34426, RNA1509_9322} {RNA1310_7631.1, RNA1509_11760, RNA1509_34426, RNA1509_9322} {RNA1509_11760, RNA1509_34426, RNA1509_9322, RNA815_3518} |
3. | MligTC455_39537 | 847 | 17.64 | Mlig455_043925 | Neo: - Age: - Region-enriched R4: 1.204/0.02719 |
ACTR2 | 2.388 | - | 0.712 | - | - | 0.719 | 0.957 | Mlig455_043925 {REF} {Length: 4431} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=324.1]} {Human: ENSG00000138071, ACTR2, ARP2 actin related protein 2 homolog, [RH, Score=672, Expect=0.0]} {Mouse: ENSMUSG00000020152, Actr2, ARP2 actin-related protein 2, [RH, Score=672, Expect=0.0]} {Dmel: FBgn0011742, Arp2, Actin-related protein 2, [RH, Score=648, Expect=0.0]} {Celegans: WBGene00000200, arx-2, Actin-related protein 2, [RH, Score=601, Expect=0.0]} {Smed: dd_Smed_v6_623_0_1, dd_Smed_v6_623_0_1, [RH, Score=634, Expect=0.0]} {RNA1509_10489, RNA1509_21141, RNA1509_23327} {RNA1310_24490, RNA1509_10489, RNA1509_21141, RNA1509_23327} {RNA1509_10489, RNA1509_21141, RNA1509_23327, RNA815_9307} |
4. | MligTC455_45601 | 917 | 19.11 | Mlig455_009807 | Neo: - Age: - |
SLC15A4 | 1.736 | - | - | - | 0.778 | - | 0.958 | Mlig455_009807 {REF} {Length: 2847} {TRANSSPLICED} {Pfam: POT family [PF00854.23, score=234.1]} {Human: ENSG00000139370, SLC15A4, solute carrier family 15 member 4, [RH, Score=309, Expect=3e-96]} {Mouse: ENSMUSG00000029416, Slc15a4, solute carrier family 15, member 4, [RH, Score=305, Expect=8e-95]} {Celegans: WBGene00003877, pept-1, Peptide transporter family 1, [Score=77.4, Expect=2e-14]} {Smed: dd_Smed_v6_8178_0_1, dd_Smed_v6_8178_0_1, [RH, Score=254, Expect=9e-76]} {RNA1509_31535, RNA1509_42147} {RNA1310_3190.1, RNA1509_42147} {RNA1509_42147, RNA815_1889} |
5. | MligTC455_46732 | 1475 | 30.74 | Mlig455_016558 | Neo: - Age: - |
ARFGAP1 | 1.706 | - | 0.756 | - | - | - | 0.950 | Mlig455_016558 {REF} {Length: 3115} {TRANSSPLICED} {Human: ENSG00000101199, ARFGAP1, ADP ribosylation factor GTPase activating protein 1, [Score=149, Expect=4e-40]} {Mouse: ENSMUSG00000027575, Arfgap1, ADP-ribosylation factor GTPase activating protein 1, [Score=145, Expect=7e-39]} {Dmel: FBgn0020655, ArfGAP1, ADP-ribosylation factor GTPase activating protein 1, [Score=192, Expect=5e-56]} {Celegans: WBGene00010500, K02B12.7, [Score=124, Expect=3e-31]} {RNA1509_3768} {RNA1310_4307.1} {RNA815_7335} |
6. | MligTC455_52832 | 453 | 9.43 | Mlig455_050695 | Neo: - Age: logFC(26M/2M)=-0.540 |
1.683 | - | - | - | - | 0.962 | 0.721 | Mlig455_050695 {REF} {Length: 1107} {Pfam: Profilin [PF00235.21, score=35.5]} {RNA1509_27250} {RNA1310_35770} {RNA815_17166} | |
7. | MligTC455_32608 | 378 | 7.88 | Mlig455_047029 | Neo: - Age: - |
CSTF3 | 1.666 | - | - | - | 0.716 | - | 0.950 | Mlig455_047029 {REF} {Length: 3606} {TRANSSPLICED} {Pfam: Suppressor of forked protein (Suf) [PF05843.16, score=264.1]} {Human: ENSG00000176102, CSTF3, cleavage stimulation factor subunit 3, [RH, Score=817, Expect=0.0]} {Mouse: ENSMUSG00000027176, Cstf3, cleavage stimulation factor, 3' pre-RNA, subunit 3, [RH, Score=817, Expect=0.0]} {Dmel: FBgn0003559, su(f), suppressor of forked, [RH, Score=741, Expect=0.0]} {Celegans: WBGene00006307, suf-1, SUppressor-of-Forked (Drosophila) homolog, [RH, Score=634, Expect=0.0]} {Smed: dd_Smed_v6_2751_0_1, dd_Smed_v6_2751_0_1, [RH, Score=852, Expect=0.0]} {RNA1509_46620, RNA1509_51439, RNA1509_6273} {RNA1310_9060, RNA1509_46620, RNA1509_51439} {RNA1509_46620, RNA1509_51439, RNA815_6112} |
8. | MligTC455_52015 | 3778 | 78.7 | Mlig455_014668, Mlig455_014744 | Neo: - Age: - |
0.975 | - | - | - | - | - | 0.975 | Mlig455_014668 {REF} {Length: 1227} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=212.9]} {Smed: dd_Smed_v6_6380_0_1, dd_Smed_v6_6380_0_1, [RH, Score=190, Expect=4e-60]} {RNA1509_15242, RNA1509_7685} {RNA1310_26947.1, RNA1509_15242, RNA1509_7685} {RNA1509_15242, RNA1509_7685, RNA815_11737} Mlig455_014744 {REF} {Length: 1053} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=212.9]} {Smed: dd_Smed_v6_6380_0_1, dd_Smed_v6_6380_0_1, [RH, Score=190, Expect=4e-60]} {RNA1509_7685} {RNA1310_26947.1} {RNA815_11737} |