Data search
Results for MligTC455_29487
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29487 | 935 | 19.48 | Mlig455_066302 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.390 Region-enriched R5: 1.259/0.00036 |
NOL6 | Mlig455_066302 {REF} {Length: 2315} {Pfam: Nrap protein PAP/OAS1-like domain 5 [PF17406.4, score=108.6]; Nrap protein nucleotidyltransferase domain 4 [PF17405.4, score=64.5]; Nrap protein domain 3 [PF17404.4, score=62.5]} {Human: ENSG00000165271, NOL6, nucleolar protein 6, [RH, Score=158, Expect=8e-40]} {Mouse: ENSMUSG00000028430, Nol6, nucleolar protein family 6 (RNA-associated), [RH, Score=166, Expect=1e-42]} {Dmel: FBgn0261286, Mat89Ba, Maternal transcript 89Ba, [RH, Score=150, Expect=1e-37]} {Celegans: WBGene00021789, nol-6, Nucleolar protein 6, [RH, Score=96.3, Expect=2e-20]} {RNA1509_18058} {RNA1310_17310.1} {RNA815_3637} |
Cumulative graph for MligTC455_29487
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.297 | 4.647 | 0.76105 | 1.00000 | |
| RegionR2 | 0.313 | 4.647 | 0.48719 | 0.86972 | |
| RegionR3 | -0.107 | 4.647 | 0.77669 | 1.00000 | |
| RegionR4 | -0.088 | 4.647 | 0.82141 | 1.00000 | |
| RegionR5 | 1.259 | 4.647 | 0.00002 | 0.00036 | |
| RegionR6 | 0.275 | 4.647 | 0.44814 | 1.00000 | |
| RegionR7 | -0.941 | 4.647 | 0.11607 | 0.64442 | |
| RegionR8 | -0.414 | 4.647 | 0.57431 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.459 | 4.647 | 0.37301 | 1.00000 | |
| RegenerationR2 | 0.532 | 4.647 | 0.11355 | 0.52534 | |
| RegenerationR3 | 0.848 | 4.647 | 0.02661 | 0.29381 | |
| RegenerationR4 | 0.694 | 4.647 | 0.05472 | 0.37611 | |
| RegenerationR5 | -0.004 | 4.647 | 0.98764 | 1.00000 | |
| RegenerationR6 | 0.961 | 4.647 | 0.00860 | 0.11397 | |
| RegenerationBL | 0.568 | 4.647 | 0.27953 | 0.64025 | |
| RegenerationTP | 1.145 | 4.647 | 0.04628 | 0.35635 |
Genes with expression patterns similar to MligTC455_29487
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29487 | 935 | 19.48 | Mlig455_066302 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.390 Region-enriched R5: 1.259/0.00036 |
NOL6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066302 {REF} {Length: 2315} {Pfam: Nrap protein PAP/OAS1-like domain 5 [PF17406.4, score=108.6]; Nrap protein nucleotidyltransferase domain 4 [PF17405.4, score=64.5]; Nrap protein domain 3 [PF17404.4, score=62.5]} {Human: ENSG00000165271, NOL6, nucleolar protein 6, [RH, Score=158, Expect=8e-40]} {Mouse: ENSMUSG00000028430, Nol6, nucleolar protein family 6 (RNA-associated), [RH, Score=166, Expect=1e-42]} {Dmel: FBgn0261286, Mat89Ba, Maternal transcript 89Ba, [RH, Score=150, Expect=1e-37]} {Celegans: WBGene00021789, nol-6, Nucleolar protein 6, [RH, Score=96.3, Expect=2e-20]} {RNA1509_18058} {RNA1310_17310.1} {RNA815_3637} |
| 2. | MligTC455_52179 | 3491 | 72.74 | Mlig455_003433, Mlig455_030650 | Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.276 Region-specific R5: 2.122 Region-enriched R5: 1.898/0.00000 |
2.636 | - | 0.815 | - | 0.870 | - | 0.951 | Mlig455_003433 {REF} {Length: 1474} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=33.9]} {RNA1509_13814, RNA1509_51614} {RNA1310_17368.2, RNA1509_51614} {RNA1509_51614, RNA815_9215} Mlig455_030650 {REF} {Length: 1399} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.9]} {RNA1509_24444} {RNA1310_17368.1} {RNA815_9215} |
|
| 3. | MligTC455_54330 | 7696 | 160.34 | Mlig455_041323, Mlig455_041349, Mlig455_056238 | Neo: Neoblast, stringent |
RBBP4 | 2.422 | - | 0.764 | - | 0.955 | - | 0.703 | Mlig455_041323 {REF} {Length: 1697} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=99.4]; WD domain, G-beta repeat [PF00400.34, score=98.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.4]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_10409} {RNA1310_2174.1} {RNA815_6795} Mlig455_041349 {REF} {Length: 1697} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=99.4]; WD domain, G-beta repeat [PF00400.34, score=98.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.4]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_10409} {RNA1310_2174.1} {RNA815_6795} Mlig455_056238 {REF} {Length: 1697} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=99.4]; WD domain, G-beta repeat [PF00400.34, score=98.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.4]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_10409, RNA1509_44954, RNA1509_51345} {RNA1310_2174.1, RNA1509_10409, RNA1509_44954, RNA1509_51345} {RNA1509_10409, RNA1509_44954, RNA1509_51345, RNA815_6795} |
| 4. | MligTC455_51556 | 736 | 15.34 | Mlig455_045221 | Neo: Irradiation Age: - |
1.734 | - | - | - | 0.967 | 0.767 | - | Mlig455_045221 {REF} {Length: 4945} {RNA1509_5476} {RNA1310_1309} {RNA815_4828} | |
| 5. | MligTC455_44793 | 798 | 16.63 | Mlig455_047394 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.328 Region-enriched R5: 1.005/0.00645 |
POLG | 0.967 | - | - | - | - | - | 0.967 | Mlig455_047394 {REF} {Length: 2310} {Pfam: DNA polymerase family A [PF00476.22, score=141.8]} {Human: ENSG00000140521, POLG, DNA polymerase gamma, catalytic subunit, [RH, Score=467, Expect=2e-149]} {Mouse: ENSMUSG00000039176, Polg, polymerase (DNA directed), gamma, [RH, Score=474, Expect=1e-152]} {Dmel: FBgn0004406, tam, tamas, [RH, Score=384, Expect=2e-119]} {Celegans: WBGene00013258, polg-1, POLG (Mitochondrial DNA POLymerase Gamma), [RH, Score=156, Expect=2e-39]} {Smed: dd_Smed_v6_13411_0_2, dd_Smed_v6_13411_0_2, [RH, Score=450, Expect=6e-145]} {RNA1509_13323, RNA1509_27198} {RNA1310_3170.1, RNA1509_13323, RNA1509_27198} {RNA1509_13323, RNA1509_27198, RNA815_14094} |
| 6. | MligTC455_32017 | 53 | 1.1 | Mlig455_056997 | Neo: - Age: Up-Down-Down |
DNAJC7 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_056997 {REF} {Length: 2381} {Pfam: Tetratricopeptide repeat [PF00515.30, score=36.2]; Tetratricopeptide repeat [PF07719.19, score=35.8]; TPR repeat [PF13414.8, score=29.2]; Tetratricopeptide repeat [PF13371.8, score=28.8]; UBA/TS-N domain [PF00627.33, score=24.1]; Tetratricopeptide repeat [PF13428.8, score=23.4]; Tetratricopeptide repeat [PF13181.8, score=20.0]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.6, Expect=4e-11]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=67.0, Expect=7e-13]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=63.9, Expect=2e-10]} {Dmel: FBgn0032586, Tpr2, Tetratricopeptide repeat protein 2, [Score=54.3, Expect=2e-07]} {Celegans: WBGene00004194, prx-5, PeRoXisome assembly factor, [Score=48.9, Expect=6e-06]} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_24467, RNA1509_7162} {RNA1310_9351.1, RNA1509_24467} {RNA1509_24467, RNA815_11968} |
| 7. | MligTC455_45268 | 1496 | 31.16 | Mlig455_016251 | Neo: - Age: - |
PDK3 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_016251 {REF} {Length: 3291} {TRANSSPLICED} {Pfam: Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase [PF10436.11, score=159.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=52.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=18.6]} {Human: ENSG00000067992, PDK3, pyruvate dehydrogenase kinase 3, [RH, Score=363, Expect=3e-123]; ENSG00000005882, PDK2, pyruvate dehydrogenase kinase 2, [RH, Score=358, Expect=5e-121]; ENSG00000004799, PDK4, pyruvate dehydrogenase kinase 4, [RH, Score=356, Expect=5e-120]; ENSG00000152256, PDK1, pyruvate dehydrogenase kinase 1, [RH, Score=345, Expect=1e-115]} {Mouse: ENSMUSG00000035232, Pdk3, pyruvate dehydrogenase kinase, isoenzyme 3, [RH, Score=364, Expect=2e-123]; ENSMUSG00000038967, Pdk2, pyruvate dehydrogenase kinase, isoenzyme 2, [RH, Score=355, Expect=8e-120]; ENSMUSG00000019577, Pdk4, pyruvate dehydrogenase kinase, isoenzyme 4, [RH, Score=352, Expect=1e-118]; ENSMUSG00000006494, Pdk1, pyruvate dehydrogenase kinase, isoenzyme 1, [RH, Score=350, Expect=9e-118]} {Dmel: FBgn0017558, Pdk, Pyruvate dehydrogenase kinase, [RH, Score=403, Expect=9e-139]} {Celegans: WBGene00022719, pdhk-2, Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial, [RH, Score=357, Expect=4e-121]} {Smed: dd_Smed_v6_8596_0_1, dd_Smed_v6_8596_0_1, [RH, Score=387, Expect=3e-133]} {RNA1509_11479, RNA1509_44060, RNA1509_51757} {RNA1310_20044, RNA1509_11479, RNA1509_44060, RNA1509_51757} {RNA1509_11479, RNA1509_44060, RNA1509_51757, RNA815_9273} |
| 8. | MligTC455_24435 | 863 | 17.98 | Mlig455_027142 | Neo: Irradiation Age: logFC(26M/2M)=0.217 Region-enriched R5: 1.478/0.00000 |
ATIC | 0.954 | - | - | - | - | - | 0.954 | Mlig455_027142 {REF} {Length: 2892} {TRANSSPLICED} {Pfam: AICARFT/IMPCHase bienzyme [PF01808.20, score=290.3]; MGS-like domain [PF02142.24, score=74.9]} {Human: ENSG00000138363, ATIC, 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000026192, Atic, 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase, [RH, Score=670, Expect=0.0]} {Dmel: FBgn0039241, CG11089, [RH, Score=690, Expect=0.0]} {Celegans: WBGene00016957, atic-1, 5-Aminoimidazole-4-carboxamide ribonucleotide formylTransferase/IMP Cyclohydrolase homolog, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_3445_0_1, dd_Smed_v6_3445_0_1, [RH, Score=635, Expect=0.0]} {RNA1509_6261} {RNA1310_7712.1, RNA1509_6261} {RNA1509_6261, RNA815_2690.1} |
| 9. | MligTC455_49751 | 1607 | 33.47 | Mlig455_054100, Mlig455_054109 | Neo: Int S/G2/M |
EXOSC3 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_054100 {REF} {Length: 1934} {TRANSSPLICED} {Pfam: KH domain [PF15985.7, score=38.8]} {Human: ENSG00000107371, EXOSC3, exosome component 3, [RH, Score=140, Expect=3e-39]} {Mouse: ENSMUSG00000028322, Exosc3, exosome component 3, [RH, Score=137, Expect=3e-38]} {Dmel: FBgn0260648, Rrp40, Ribosomal RNA processing 40, [RH, Score=138, Expect=3e-39]} {Celegans: WBGene00010325, exos-3, EXOSome (Multiexonuclease complex) component, [RH, Score=117, Expect=2e-31]} {Smed: dd_Smed_v6_12345_0_1, dd_Smed_v6_12345_0_1, [RH, Score=100, Expect=1e-24]} {RNA1509_14817} {RNA1310_22285.1, RNA1509_14817} {RNA1509_14817, RNA815_10248} Mlig455_054109 {REF} {Length: 1465} {Pfam: KH domain [PF15985.7, score=38.8]} {Human: ENSG00000107371, EXOSC3, exosome component 3, [RH, Score=140, Expect=3e-39]} {Mouse: ENSMUSG00000028322, Exosc3, exosome component 3, [RH, Score=137, Expect=3e-38]} {Dmel: FBgn0260648, Rrp40, Ribosomal RNA processing 40, [RH, Score=138, Expect=3e-39]} {Celegans: WBGene00010325, exos-3, EXOSome (Multiexonuclease complex) component, [RH, Score=117, Expect=2e-31]} {Smed: dd_Smed_v6_12345_0_1, dd_Smed_v6_12345_0_1, [RH, Score=100, Expect=1e-24]} {RNA1509_14817} {RNA1310_22285.1} {RNA815_10248} |