Data search
Results for MligTC455_45268
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45268 | 1496 | 31.16 | Mlig455_016251 | Neo: - Age: - |
PDK3 | Mlig455_016251 {REF} {Length: 3291} {TRANSSPLICED} {Pfam: Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase [PF10436.11, score=159.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=52.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=18.6]} {Human: ENSG00000067992, PDK3, pyruvate dehydrogenase kinase 3, [RH, Score=363, Expect=3e-123]; ENSG00000005882, PDK2, pyruvate dehydrogenase kinase 2, [RH, Score=358, Expect=5e-121]; ENSG00000004799, PDK4, pyruvate dehydrogenase kinase 4, [RH, Score=356, Expect=5e-120]; ENSG00000152256, PDK1, pyruvate dehydrogenase kinase 1, [RH, Score=345, Expect=1e-115]} {Mouse: ENSMUSG00000035232, Pdk3, pyruvate dehydrogenase kinase, isoenzyme 3, [RH, Score=364, Expect=2e-123]; ENSMUSG00000038967, Pdk2, pyruvate dehydrogenase kinase, isoenzyme 2, [RH, Score=355, Expect=8e-120]; ENSMUSG00000019577, Pdk4, pyruvate dehydrogenase kinase, isoenzyme 4, [RH, Score=352, Expect=1e-118]; ENSMUSG00000006494, Pdk1, pyruvate dehydrogenase kinase, isoenzyme 1, [RH, Score=350, Expect=9e-118]} {Dmel: FBgn0017558, Pdk, Pyruvate dehydrogenase kinase, [RH, Score=403, Expect=9e-139]} {Celegans: WBGene00022719, pdhk-2, Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial, [RH, Score=357, Expect=4e-121]} {Smed: dd_Smed_v6_8596_0_1, dd_Smed_v6_8596_0_1, [RH, Score=387, Expect=3e-133]} {RNA1509_11479, RNA1509_44060, RNA1509_51757} {RNA1310_20044, RNA1509_11479, RNA1509_44060, RNA1509_51757} {RNA1509_11479, RNA1509_44060, RNA1509_51757, RNA815_9273} |
Cumulative graph for MligTC455_45268
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.22 | 5.081 | 0.68642 | 1.00000 | |
| RegionR2 | -0.211 | 5.081 | 0.45146 | 0.83913 | |
| RegionR3 | -0.103 | 5.081 | 0.63562 | 1.00000 | |
| RegionR4 | 0.357 | 5.081 | 0.12650 | 0.35906 | |
| RegionR5 | 0.42 | 5.081 | 0.02486 | 0.11319 | |
| RegionR6 | -0.036 | 5.081 | 0.87341 | 1.00000 | |
| RegionR7 | -0.147 | 5.081 | 0.60126 | 1.00000 | |
| RegionR8 | -0.061 | 5.081 | 0.85546 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.552 | 5.081 | 0.00220 | 0.24639 | |
| RegenerationR2 | -0.134 | 5.081 | 0.59478 | 0.91319 | |
| RegenerationR3 | -0.266 | 5.081 | 0.31392 | 0.74390 | |
| RegenerationR4 | -0.727 | 5.081 | 0.00427 | 0.09012 | |
| RegenerationR5 | -0.412 | 5.081 | 0.07573 | 0.43028 | |
| RegenerationR6 | -0.19 | 5.081 | 0.49973 | 0.80588 | |
| RegenerationBL | -0.459 | 5.081 | 0.20334 | 0.54326 | |
| RegenerationTP | -0.395 | 5.081 | 0.27719 | 0.72526 |
Genes with expression patterns similar to MligTC455_45268
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45268 | 1496 | 31.16 | Mlig455_016251 | Neo: - Age: - |
PDK3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_016251 {REF} {Length: 3291} {TRANSSPLICED} {Pfam: Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase [PF10436.11, score=159.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=52.7]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=18.6]} {Human: ENSG00000067992, PDK3, pyruvate dehydrogenase kinase 3, [RH, Score=363, Expect=3e-123]; ENSG00000005882, PDK2, pyruvate dehydrogenase kinase 2, [RH, Score=358, Expect=5e-121]; ENSG00000004799, PDK4, pyruvate dehydrogenase kinase 4, [RH, Score=356, Expect=5e-120]; ENSG00000152256, PDK1, pyruvate dehydrogenase kinase 1, [RH, Score=345, Expect=1e-115]} {Mouse: ENSMUSG00000035232, Pdk3, pyruvate dehydrogenase kinase, isoenzyme 3, [RH, Score=364, Expect=2e-123]; ENSMUSG00000038967, Pdk2, pyruvate dehydrogenase kinase, isoenzyme 2, [RH, Score=355, Expect=8e-120]; ENSMUSG00000019577, Pdk4, pyruvate dehydrogenase kinase, isoenzyme 4, [RH, Score=352, Expect=1e-118]; ENSMUSG00000006494, Pdk1, pyruvate dehydrogenase kinase, isoenzyme 1, [RH, Score=350, Expect=9e-118]} {Dmel: FBgn0017558, Pdk, Pyruvate dehydrogenase kinase, [RH, Score=403, Expect=9e-139]} {Celegans: WBGene00022719, pdhk-2, Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial, [RH, Score=357, Expect=4e-121]} {Smed: dd_Smed_v6_8596_0_1, dd_Smed_v6_8596_0_1, [RH, Score=387, Expect=3e-133]} {RNA1509_11479, RNA1509_44060, RNA1509_51757} {RNA1310_20044, RNA1509_11479, RNA1509_44060, RNA1509_51757} {RNA1509_11479, RNA1509_44060, RNA1509_51757, RNA815_9273} |
| 2. | MligTC455_48602 | 667 | 13.9 | Mlig455_042049 | Neo: - Age: - |
SLC35E3 | 1.856 | - | - | - | 0.961 | - | 0.895 | Mlig455_042049 {REF} {Length: 2900} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=65.7]; EamA-like transporter family [PF00892.22, score=32.5]; UAA transporter family [PF08449.13, score=24.6]} {Human: ENSG00000175782, SLC35E3, solute carrier family 35 member E3, [RH, Score=294, Expect=9e-99]} {Mouse: ENSMUSG00000060181, Slc35e3, solute carrier family 35, member E3, [RH, Score=289, Expect=1e-96]} {RNA1509_18211, RNA1509_50446, RNA1509_51261, RNA1509_55265} {RNA1310_17614, RNA1509_50446, RNA1509_51261, RNA1509_55265} {RNA1509_50446, RNA1509_51261, RNA1509_55265, RNA815_11669} |
| 3. | MligTC455_03532 | 900 | 18.74 | Mlig455_038713 | Neo: - Age: - Region-enriched R4: 1.554/0.01859 |
HMCN2 | 1.82 | - | - | - | 0.950 | - | 0.870 | Mlig455_038713 {REF} {Length: 2884} {Pfam: Immunoglobulin domain [PF13927.8, score=98.3]; Immunoglobulin I-set domain [PF07679.18, score=73.4]; Immunoglobulin domain [PF00047.27, score=61.0]; Immunoglobulin domain [PF13895.8, score=59.7]; Immunoglobulin V-set domain [PF07686.19, score=51.1]; Immunoglobulin domain [PF18452.3, score=22.0]; CD47 immunoglobulin-like domain [PF08204.13, score=18.7]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=70.5, Expect=2e-12]; ENSG00000146555, SDK1, sidekick cell adhesion molecule 1, [Score=68.9, Expect=7e-12]; ENSG00000160867, FGFR4, fibroblast growth factor receptor 4, [Score=68.9, Expect=5e-12]; ENSG00000143341, HMCN1, hemicentin 1, [Score=67.8, Expect=2e-11]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=73.2, Expect=2e-13]} {Dmel: FBgn0052791, DIP-alpha, Dpr-interacting protein alpha, [RH, Score=84.7, Expect=2e-17]} {Celegans: WBGene00004372, rig-5, NeuRonal IGCAM, [Score=68.2, Expect=3e-12]} {Smed: dd_Smed_v6_3768_0_1, dd_Smed_v6_3768_0_1, [RH, Score=169, Expect=7e-49]} {RNA1509_2740} {RNA1310_22774.1} {RNA815_4345.1} |
| 4. | MligTC455_52591 | 1549 | 32.27 | Mlig455_066162 | Neo: - Age: - |
COPB1 | 1.808 | - | - | - | 0.855 | - | 0.953 | Mlig455_066162 {REF} {Length: 3986} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=361.8]; Coatomer beta subunit appendage platform [PF14806.8, score=189.4]; Coatomer beta C-terminal region [PF07718.14, score=183.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=39.9]; HEAT repeats [PF13646.8, score=30.8]; HEAT repeat [PF02985.24, score=22.5]; HEAT-like repeat [PF13513.8, score=21.1]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1321, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1326, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1219, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1103, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1180, Expect=0.0]} {RNA1509_1298} {RNA1310_2383} {RNA815_1794} |
| 5. | MligTC455_51908 | 575 | 11.98 | Mlig455_044933 | Neo: - Age: - |
SYAP1 | 1.787 | - | - | - | 0.953 | - | 0.834 | Mlig455_044933 {REF} {Length: 1947} {TRANSSPLICED} {Pfam: BSD domain [PF03909.19, score=47.9]} {Human: ENSG00000169895, SYAP1, synapse associated protein 1, [RH, Score=103, Expect=4e-25]} {Mouse: ENSMUSG00000031357, Syap1, synapse associated protein 1, [RH, Score=105, Expect=5e-26]} {Dmel: FBgn0013334, Sap47, Synapse-associated protein 47kD, [Score=103, Expect=1e-25]} {Celegans: WBGene00007621, C16C2.4, [Score=76.3, Expect=6e-16]} {Smed: dd_Smed_v6_1295_0_1, dd_Smed_v6_1295_0_1, [RH, Score=95.9, Expect=4e-23]} {RNA1509_31173} {RNA1310_21856} {RNA815_15095} |
| 6. | MligTC455_46454 | 749 | 15.61 | Mlig455_041629 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.395 |
SLC33A1 | 1.733 | - | 0.781 | - | 0.952 | - | - | Mlig455_041629 {REF} {Length: 2675} {TRANSSPLICED} {Pfam: Acetyl-coenzyme A transporter 1 [PF13000.9, score=234.0]} {Human: ENSG00000169359, SLC33A1, solute carrier family 33 member 1, [Score=287, Expect=2e-90]} {Mouse: ENSMUSG00000027822, Slc33a1, solute carrier family 33 (acetyl-CoA transporter), member 1, [Score=287, Expect=1e-90]} {Dmel: FBgn0036662, CG9706, [Score=292, Expect=8e-93]} {Celegans: WBGene00012033, T26C5.3, [Score=262, Expect=5e-81]} {Smed: dd_Smed_v6_6308_0_1, dd_Smed_v6_6308_0_1, [Score=355, Expect=1e-117]} {RNA1509_22184, RNA1509_8415} {RNA1310_9664, RNA1509_22184} {RNA1509_22184, RNA815_3329.1} |
| 7. | MligTC455_29659 | 1489 | 31.02 | Mlig455_013594 | Neo: - Age: logFC(26M/2M)=0.174 Regeneration-upregulated BL: 1.658 Regeneration-enriched BL: 1.658 |
UGP2 | 1.687 | - | - | - | 0.962 | - | 0.725 | Mlig455_013594 {REF} {Length: 2365} {TRANSSPLICED} {Pfam: UTP--glucose-1-phosphate uridylyltransferase [PF01704.20, score=614.7]} {Human: ENSG00000169764, UGP2, UDP-glucose pyrophosphorylase 2, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000001891, Ugp2, UDP-glucose pyrophosphorylase 2, [RH, Score=634, Expect=0.0]} {Dmel: FBgn0035978, UGP, [RH, Score=622, Expect=0.0]} {Celegans: WBGene00010665, K08E3.5, [RH, Score=621, Expect=0.0]} {Smed: dd_Smed_v6_3057_0_1, dd_Smed_v6_3057_0_1, [RH, Score=621, Expect=0.0]} {RNA1509_1617, RNA1509_16972, RNA1509_22084, RNA1509_34358, RNA1509_34975} {RNA1310_6161.1, RNA1509_16972, RNA1509_22084, RNA1509_34358, RNA1509_34975} {RNA1509_16972, RNA1509_22084, RNA1509_34358, RNA1509_34975, RNA815_2096.1} |
| 8. | MligTC455_32671 | 2687 | 55.97 | Mlig455_000015, Mlig455_063723 | Neo: - Age: - |
0.983 | - | - | - | 0.983 | - | - | Mlig455_000015 {REF} {Length: 669} {NoTransDecoderORF} {RNA1310_58941} {RNA815_56892} Mlig455_063723 {REF} {Length: 2704} {TRANSSPLICED} {RNA1509_32182, RNA1509_4348} {RNA1310_34334.1, RNA1509_32182, RNA1509_4348} {RNA1509_32182, RNA1509_4348, RNA815_13650.2} |
|
| 9. | MligTC455_34171 | 1083 | 22.57 | Mlig455_037006 | Neo: Int S/G2/M |
RACK1 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_037006 {REF} {Length: 1275} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=161.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=46.0]; Nucleoporin Nup120/160 [PF11715.10, score=32.7]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=23.1]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=21.3]; Cytochrome D1 heme domain [PF02239.18, score=18.9]; Protein of unknown function (DUF1513) [PF07433.13, score=18.9]} {Human: ENSG00000204628, RACK1, receptor for activated C kinase 1, [Score=510, Expect=0.0]} {Mouse: ENSMUSG00000020372, Rack1, receptor for activated C kinase 1, [Score=510, Expect=0.0]} {Dmel: FBgn0020618, Rack1, Receptor of activated protein kinase C 1, [RH, Score=461, Expect=1e-164]} {Celegans: WBGene00010556, rack-1, Guanine nucleotide-binding protein subunit beta-2-like 1, [RH, Score=434, Expect=7e-154]} {Smed: dd_Smed_v6_174_0_1, dd_Smed_v6_174_0_1, [RH, Score=485, Expect=2e-174]} {RNA1509_454} {RNA1310_23103.1} {RNA815_9604} |
| 10. | MligTC455_29487 | 935 | 19.48 | Mlig455_066302 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.390 Region-enriched R5: 1.259/0.00036 |
NOL6 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_066302 {REF} {Length: 2315} {Pfam: Nrap protein PAP/OAS1-like domain 5 [PF17406.4, score=108.6]; Nrap protein nucleotidyltransferase domain 4 [PF17405.4, score=64.5]; Nrap protein domain 3 [PF17404.4, score=62.5]} {Human: ENSG00000165271, NOL6, nucleolar protein 6, [RH, Score=158, Expect=8e-40]} {Mouse: ENSMUSG00000028430, Nol6, nucleolar protein family 6 (RNA-associated), [RH, Score=166, Expect=1e-42]} {Dmel: FBgn0261286, Mat89Ba, Maternal transcript 89Ba, [RH, Score=150, Expect=1e-37]} {Celegans: WBGene00021789, nol-6, Nucleolar protein 6, [RH, Score=96.3, Expect=2e-20]} {RNA1509_18058} {RNA1310_17310.1} {RNA815_3637} |
| 11. | MligTC455_25593 | 620 | 12.91 | Mlig455_010640 | Neo: - Age: Up-Down-Up |
0.957 | - | - | - | - | - | 0.957 | Mlig455_010640 {REF} {Length: 6295} {TRANSSPLICED} {RNA1509_21874, RNA1509_21918, RNA1509_4078} {RNA1310_3072, RNA1509_21874, RNA1509_21918} {RNA1509_21874, RNA1509_21918, RNA815_5186} | |
| 12. | MligTC455_40191 | 742 | 15.45 | Mlig455_057496 | Neo: - Age: - |
CPSF4L | 0.957 | - | - | - | - | - | 0.957 | Mlig455_057496 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=31.4]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]; ENSG00000170871, KIAA0232, KIAA0232, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1310_12659.1, RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815, RNA815_306} |
| 13. | MligTC455_49584 | 892 | 18.58 | Mlig455_040844 | Neo: - Age: - Region-enriched R4: 2.022/0.00004 |
UBXN1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_040844 {REF} {Length: 1272} {TRANSSPLICED} {Pfam: UBX domain [PF00789.22, score=53.7]} {Human: ENSG00000162191, UBXN1, UBX domain protein 1, [RH, Score=79.0, Expect=3e-16]} {Mouse: ENSMUSG00000071655, Ubxn1, UBX domain protein 1, [RH, Score=99.8, Expect=6e-24]} {Dmel: FBgn0035830, CG8209, [RH, Score=158, Expect=9e-46]} {Celegans: WBGene00017733, ubxn-1, UBX-containing protein in Nematodes, [RH, Score=153, Expect=2e-44]} {Smed: dd_Smed_v6_3619_0_1, dd_Smed_v6_3619_0_1, [RH, Score=160, Expect=4e-47]} {RNA1509_24118} {RNA1310_26309, RNA1509_24118} {RNA1509_24118, RNA815_23834} |
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