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Results for MligTC455_29493

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29493 248 5.18 Mlig455_047687

Neo: -

Age: Down-Up-Up

 Mlig455_047687 {REF} {Length: 2684} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=34.3]} {RNA1509_56944} {RNA1310_9435} {RNA815_24951}

Cumulative graph for MligTC455_29493

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.854 2.925 0.20501 0.84373
RegionR2 0.928 2.925 0.24804 0.62554
RegionR3 0.3 2.925 0.55413 1.00000
RegionR4 -0.172 2.925 0.81579 1.00000
RegionR5 1.481 2.925 0.00991 0.05734
RegionR6 0.306 2.925 0.55410 1.00000
RegionR7 -5.72 2.925 0.00855 0.15614
RegionR8 1.024 2.925 0.35515 0.98927

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.16 2.925 0.10586 0.82735
RegenerationR2 -0.179 2.925 0.75003 0.97323
RegenerationR3 0.509 2.925 0.42489 0.81810
RegenerationR4 0.378 2.925 0.54160 0.88920
RegenerationR5 0.13 2.925 0.80930 0.99126
RegenerationR6 -0.256 2.925 0.70295 0.92608
RegenerationBL 1.776 2.925 0.15064 0.46376
RegenerationTP 0.848 2.925 0.55381 0.93571


Genes with expression patterns similar to MligTC455_29493

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29493 248 5.18 Mlig455_047687

Neo: -

Age: Down-Up-Up

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_047687 {REF} {Length: 2684} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=34.3]} {RNA1509_56944} {RNA1310_9435} {RNA815_24951}
2. MligTC455_45967 455 9.48 Mlig455_057177

Neo: Int S/G2/M

Age: Down-Up-Down

 SMARCE1 1.828 - 0.878 - - - 0.950 Mlig455_057177 {REF} {Length: 2382} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=55.5]; HMG-box domain [PF09011.12, score=23.4]} {Human: ENSG00000073584, SMARCE1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [Score=117, Expect=3e-29]} {Mouse: ENSMUSG00000037935, Smarce1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [Score=118, Expect=5e-29]} {Dmel: FBgn0030093, Bap111, Brahma associated protein 111kD, [Score=101, Expect=7e-23]} {Celegans: WBGene00022182, swsn-3, SWI/SNF nucleosome remodeling complex component, [Score=85.9, Expect=2e-18]} {Smed: dd_Smed_v6_5085_0_1, dd_Smed_v6_5085_0_1, [Score=149, Expect=4e-39]} {RNA1509_34958, RNA1509_53246} {RNA1310_8835.1, RNA1509_34958} {RNA1509_34958, RNA815_5568}
3. MligTC455_36946 518 10.8 Mlig455_002389, Mlig455_009695, Mlig455_010866, Mlig455_032526, Mlig455_041733, Mlig455_043602, Mlig455_043604, Mlig455_049778, Mlig455_052178, Mlig455_055111, Mlig455_064698, Mlig455_068701, Mlig455_070228

Neo: -

Age: Down-Up-Down

 0.967 - - - - 0.967 -

Mlig455_002389 {REF} {Length: 1599} {Pfam: Phage integrase family [PF00589.24, score=25.5]; Phage integrase, N-terminal SAM-like domain [PF13495.8, score=25.1]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=21.8]} {RNA1509_19505} {RNA1310_23142} {RNA815_3378}

Mlig455_009695 {REF} {Length: 2112} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_32599} {RNA1310_1659} {RNA815_252.1}

Mlig455_010866 {REF} {Length: 1342} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_32599} {RNA1310_1659} {RNA815_252.1}

Mlig455_032526 {REF} {Length: 1072} {Pfam: Phage integrase family [PF00589.24, score=25.5]; Phage integrase, N-terminal SAM-like domain [PF13495.8, score=25.5]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=22.1]} {RNA1509_19505} {RNA1310_1707} {RNA815_3378}

Mlig455_041733 {REF} {Length: 1235} {Pfam: Phage integrase, N-terminal SAM-like domain [PF13495.8, score=24.6]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=20.4]} {RNA1509_19505} {RNA1310_1707} {RNA815_3378}

Mlig455_043602 {REF} {Length: 1162} {Pfam: Phage integrase family [PF00589.24, score=25.4]} {RNA1509_19505} {RNA1310_23142} {RNA815_3378}

Mlig455_043604 {REF} {Length: 1248} {Pfam: Phage integrase family [PF00589.24, score=25.6]; Phage integrase, N-terminal SAM-like domain [PF13495.8, score=24.7]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=20.1]} {RNA1509_19505} {RNA1310_23142} {RNA815_3378}

Mlig455_049778 {REF} {Length: 5480} {Pfam: Phage integrase family [PF00589.24, score=25.9]} {RNA1509_19505} {RNA1310_1707} {RNA815_3378}

Mlig455_052178 {REF} {Length: 1073} {Pfam: Phage integrase family [PF00589.24, score=26.0]; Phage integrase, N-terminal SAM-like domain [PF13495.8, score=25.3]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=21.8]; SAP domain [PF02037.29, score=19.9]} {RNA1509_19505} {RNA1310_1707} {RNA815_3378}

Mlig455_055111 {REF} {Length: 1936} {Pfam: Phage integrase family [PF00589.24, score=25.9]; Phage integrase, N-terminal SAM-like domain [PF13495.8, score=25.3]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=21.8]; SAP domain [PF02037.29, score=19.9]} {RNA1509_19505} {RNA1310_23142} {RNA815_3378}

Mlig455_064698 {REF} {Length: 961} {Pfam: Phage integrase family [PF00589.24, score=25.7]} {RNA1509_19505} {RNA1310_23142} {RNA815_3378}

Mlig455_068701 {REF} {Length: 1161} {Pfam: Phage integrase, N-terminal SAM-like domain [PF13495.8, score=26.8]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=23.3]} {RNA1509_19505} {RNA1310_1707} {RNA815_3378}

Mlig455_070228 {REF} {Length: 2056} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=125.4]; RNase H [PF00075.26, score=47.5]} {RNA1509_46023, RNA1509_50041} {RNA1310_1401, RNA1509_46023} {RNA1509_46023, RNA815_252.1}
4. MligTC455_30970 324 6.76 Mlig455_008784

Neo: Int S/G2/M

Age: Up-Up-Down

Region-enriched R5: 2.058/0.00029

 MSH6 0.958 - - - - 0.958 - Mlig455_008784 {REF} {Length: 2346} {Pfam: MutS domain V [PF00488.23, score=249.3]; MutS family domain IV [PF05190.20, score=34.2]; MutS domain III [PF05192.20, score=28.2]} {Human: ENSG00000116062, MSH6, mutS homolog 6, [Score=466, Expect=6e-154]} {Mouse: ENSMUSG00000005370, Msh6, mutS homolog 6, [Score=466, Expect=1e-151]} {Dmel: FBgn0036486, Msh6, [Score=416, Expect=8e-134]} {Celegans: WBGene00003422, msh-6, MSH (MutS Homolog) family, [Score=341, Expect=6e-106]} {Smed: dd_Smed_v6_15463_0_1, dd_Smed_v6_15463_0_1, [Score=404, Expect=1e-129]} {RNA1509_49698, RNA1509_52890} {RNA1310_1357.1, RNA1509_52890} {RNA1509_52890, RNA815_8507}
5. MligTC455_30929 94 1.95 Mlig455_006570

Neo: -

Age: Down-Down-Up

 0.957 - - - - 0.957 - Mlig455_006570 {REF} {Length: 1648} {Pfam: SAP domain [PF02037.29, score=39.7]; Phage integrase family [PF00589.24, score=27.3]; Phage integrase, N-terminal SAM-like domain [PF13495.8, score=25.6]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=20.0]} {RNA1509_19505} {RNA1310_1707} {RNA815_3378}
6. MligTC455_27277 155 3.22 Mlig455_004131

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_004131 {REF} {Length: 3440} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=181.3]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=25.1]; FAD binding domain [PF01494.21, score=21.4]} {Smed: dd_Smed_v6_5776_0_1, dd_Smed_v6_5776_0_1, [Score=239, Expect=2e-75]} {RNA1509_28366, RNA1509_28488, RNA1509_52974} {RNA1310_19914, RNA1509_28366, RNA1509_28488, RNA1509_52974} {RNA1509_28366, RNA1509_28488, RNA1509_52974, RNA815_11518}
7. MligTC455_42960 364 7.58 Mlig455_029241, Mlig455_035628

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_029241 {REF} {Length: 3074} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=20.1]} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=58.9, Expect=7e-09]} {RNA1509_32779} {RNA1310_20140} {RNA815_11665}

Mlig455_035628 {REF} {Length: 2813} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=19.0]} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=56.6, Expect=3e-08]} {RNA1509_32779, RNA1509_46364} {RNA1310_20140, RNA1509_32779, RNA1509_46364} {RNA1509_32779, RNA1509_46364, RNA815_11665}

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