Data search
Results for MligTC455_45967
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45967 | 455 | 9.48 | Mlig455_057177 | Neo: Int S/G2/M Age: Down-Up-Down |
SMARCE1 | Mlig455_057177 {REF} {Length: 2382} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=55.5]; HMG-box domain [PF09011.12, score=23.4]} {Human: ENSG00000073584, SMARCE1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [Score=117, Expect=3e-29]} {Mouse: ENSMUSG00000037935, Smarce1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [Score=118, Expect=5e-29]} {Dmel: FBgn0030093, Bap111, Brahma associated protein 111kD, [Score=101, Expect=7e-23]} {Celegans: WBGene00022182, swsn-3, SWI/SNF nucleosome remodeling complex component, [Score=85.9, Expect=2e-18]} {Smed: dd_Smed_v6_5085_0_1, dd_Smed_v6_5085_0_1, [Score=149, Expect=4e-39]} {RNA1509_34958, RNA1509_53246} {RNA1310_8835.1, RNA1509_34958} {RNA1509_34958, RNA815_5568} |
Cumulative graph for MligTC455_45967
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.948 | 3.575 | 0.51456 | 1.00000 | |
| RegionR2 | -0.033 | 3.575 | 0.95347 | 1.00000 | |
| RegionR3 | 0.016 | 3.575 | 0.97157 | 1.00000 | |
| RegionR4 | -0.292 | 3.575 | 0.56442 | 0.88365 | |
| RegionR5 | 0.728 | 3.575 | 0.06584 | 0.22810 | |
| RegionR6 | -0.006 | 3.575 | 0.99192 | 1.00000 | |
| RegionR7 | -0.044 | 3.575 | 0.94758 | 1.00000 | |
| RegionR8 | 0.579 | 3.575 | 0.49246 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.733 | 3.575 | 0.68663 | 1.00000 | |
| RegenerationR2 | 0.021 | 3.575 | 0.96140 | 1.00000 | |
| RegenerationR3 | 0.225 | 3.575 | 0.64768 | 0.92794 | |
| RegenerationR4 | 0.201 | 3.575 | 0.66797 | 0.94169 | |
| RegenerationR5 | -0.086 | 3.575 | 0.82920 | 0.99743 | |
| RegenerationR6 | 0.958 | 3.575 | 0.04336 | 0.26020 | |
| RegenerationBL | 0.52 | 3.575 | 0.36520 | 0.73365 | |
| RegenerationTP | -0.251 | 3.575 | 0.71875 | 1.00000 |
Genes with expression patterns similar to MligTC455_45967
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45967 | 455 | 9.48 | Mlig455_057177 | Neo: Int S/G2/M Age: Down-Up-Down |
SMARCE1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057177 {REF} {Length: 2382} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=55.5]; HMG-box domain [PF09011.12, score=23.4]} {Human: ENSG00000073584, SMARCE1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [Score=117, Expect=3e-29]} {Mouse: ENSMUSG00000037935, Smarce1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [Score=118, Expect=5e-29]} {Dmel: FBgn0030093, Bap111, Brahma associated protein 111kD, [Score=101, Expect=7e-23]} {Celegans: WBGene00022182, swsn-3, SWI/SNF nucleosome remodeling complex component, [Score=85.9, Expect=2e-18]} {Smed: dd_Smed_v6_5085_0_1, dd_Smed_v6_5085_0_1, [Score=149, Expect=4e-39]} {RNA1509_34958, RNA1509_53246} {RNA1310_8835.1, RNA1509_34958} {RNA1509_34958, RNA815_5568} |
| 2. | MligTC455_29493 | 248 | 5.18 | Mlig455_047687 | Neo: - Age: Down-Up-Up |
1.828 | - | 0.878 | - | - | - | 0.950 | Mlig455_047687 {REF} {Length: 2684} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=34.3]} {RNA1509_56944} {RNA1310_9435} {RNA815_24951} | |
| 3. | MligTC455_35414 | 1626 | 33.89 | Mlig455_066970 | Neo: - |
TXNDC17 | 1.772 | - | - | 0.956 | - | - | 0.816 | Mlig455_066970 {REF} {Length: 1241} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF953) [PF06110.13, score=100.0]; Thioredoxin [PF00085.22, score=21.1]} {Human: ENSG00000129235, TXNDC17, thioredoxin domain containing 17, [RH, Score=68.2, Expect=3e-15]} {Mouse: ENSMUSG00000020803, Txndc17, thioredoxin domain containing 17, [Score=69.7, Expect=6e-16]} {Dmel: FBgn0040396, CG3939, [RH, Score=62.0, Expect=6e-13]} {Celegans: WBGene00022188, Y71H2AR.1, [RH, Score=57.8, Expect=1e-11]} {Smed: dd_Smed_v6_2482_0_1, dd_Smed_v6_2482_0_1, [RH, Score=85.9, Expect=2e-22]} {RNA1509_10015, RNA1509_36663} {RNA1310_27877, RNA1509_10015, RNA1509_36663} {RNA1509_10015, RNA1509_36663, RNA815_12108} |
| 4. | MligTC455_36832 | 6263 | 130.48 | Mlig455_051664 | Neo: - Age: - |
1.686 | - | - | 0.957 | - | - | 0.729 | Mlig455_051664 {REF} {Length: 686} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35203, RNA1509_3775} {RNA1310_48900, RNA1509_35203, RNA1509_3775} {RNA1509_35203, RNA1509_3775, RNA815_26209} | |
| 5. | MligTC455_48493 | 942 | 19.63 | Mlig455_041636 | Neo: - Age: - |
DDX42 | 1.664 | 0.710 | - | - | 0.954 | - | - | Mlig455_041636 {REF} {Length: 2613} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=158.9]; Helicase conserved C-terminal domain [PF00271.33, score=92.3]} {Human: ENSG00000198231, DDX42, DEAD-box helicase 42, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000020705, Ddx42, DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, [RH, Score=697, Expect=0.0]} {Dmel: FBgn0036104, CG6418, [RH, Score=704, Expect=0.0]} {Celegans: WBGene00008119, C46F11.4, [RH, Score=604, Expect=0.0]} {Smed: dd_Smed_v6_5205_0_1, dd_Smed_v6_5205_0_1, [RH, Score=773, Expect=0.0]} {RNA1509_5281, RNA1509_54259} {RNA1310_7512, RNA1509_5281, RNA1509_54259} {RNA1509_5281, RNA1509_54259, RNA815_2556} |
| 6. | MligTC455_11992 | 547 | 11.4 | Mlig455_070918 | Neo: Irradiation Age: - |
0.957 | - | - | - | 0.957 | - | - | Mlig455_070918 {REF} {Length: 2532} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=30.1]} {RNA1509_24959, RNA1509_52445} {RNA1310_2279.2, RNA1509_24959} {RNA1509_24959, RNA815_17518} | |
| 7. | MligTC455_31043 | 537 | 11.19 | Mlig455_030848 | Neo: - Age: Up-Up-Down |
PCYT2 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_030848 {REF} {Length: 3688} {Pfam: Cytidylyltransferase-like [PF01467.28, score=150.5]; FAD synthetase [PF06574.14, score=20.2]} {Human: ENSG00000185813, PCYT2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=435, Expect=3e-152]} {Mouse: ENSMUSG00000025137, Pcyt2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=428, Expect=2e-149]} {Dmel: FBgn0032482, Pect, Phosphoethanolamine cytidylyltransferase, [RH, Score=431, Expect=1e-150]} {Celegans: WBGene00021352, Y37E3.11, [RH, Score=417, Expect=8e-146]} {Smed: dd_Smed_v6_3373_0_1, dd_Smed_v6_3373_0_1, [RH, Score=387, Expect=3e-134]} {RNA1509_15047} {RNA1310_17195.1} {RNA815_6039.1} |
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