TomoSeq data search

Data search

Results for MligTC455_29522

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29522

183

3.82

Mlig455_049326, Mlig455_049412

Neo: -

Age: -

PRKAB1, PRKAB2

Mlig455_049326 {REF} {Length: 1543} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=96.3]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=22.3]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=21.0]} {Human: ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [Score=95.5, Expect=4e-24]; ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [Score=95.5, Expect=4e-24]} {Mouse: ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [Score=97.4, Expect=5e-25]; ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [Score=95.1, Expect=4e-24]} {Dmel: FBgn0260972, alc, alicorn, [Score=78.6, Expect=3e-18]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [Score=83.6, Expect=5e-20]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [Score=105, Expect=4e-28]} {RNA1509_18723} {RNA1310_30146} {RNA815_15840}

Mlig455_049412 {REF} {Length: 5999} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=111.2]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=89.0]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=21.0]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=20.1]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=238, Expect=1e-77]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=233, Expect=1e-75]} {Mouse: ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=238, Expect=1e-77]; ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=234, Expect=3e-76]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=201, Expect=4e-64]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [RH, Score=218, Expect=2e-70]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=225, Expect=3e-72]} {RNA1509_1508, RNA1509_31776, RNA1509_57530} {RNA1310_7321.1, RNA1509_1508, RNA1509_57530} {RNA1509_1508, RNA1509_57530, RNA815_2521.1}

Cumulative graph for MligTC455_29522

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.964	2.521	0.57851	1.00000
RegionR2	-1.171	2.521	0.08507	0.35830
RegionR3	-0.552	2.521	0.33647	0.87318
RegionR4	1.307	2.521	0.06815	0.23797
RegionR5	0.079	2.521	0.87667	1.00000
RegionR6	-0.523	2.521	0.39796	0.97049
RegionR7	0.219	2.521	0.77358	1.00000
RegionR8	-0.323	2.521	0.75720	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.631	2.521	0.41862	1.00000
RegenerationR2	1.048	2.521	0.02875	0.27979
RegenerationR3	0.116	2.521	0.85555	0.99984
RegenerationR4	-0.13	2.521	0.83086	0.99765
RegenerationR5	0.754	2.521	0.15530	0.57562
RegenerationR6	-0.314	2.521	0.66156	0.90441
RegenerationBL	-0.041	2.521	0.96135	1.00000
RegenerationTP	-0.358	2.521	0.68486	1.00000

Genes with expression patterns similar to MligTC455_29522

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29522	183	3.82	Mlig455_049326, Mlig455_049412	Neo: - Age: -	PRKAB1, PRKAB2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049326 {REF} {Length: 1543} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=96.3]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=22.3]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=21.0]} {Human: ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [Score=95.5, Expect=4e-24]; ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [Score=95.5, Expect=4e-24]} {Mouse: ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [Score=97.4, Expect=5e-25]; ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [Score=95.1, Expect=4e-24]} {Dmel: FBgn0260972, alc, alicorn, [Score=78.6, Expect=3e-18]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [Score=83.6, Expect=5e-20]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [Score=105, Expect=4e-28]} {RNA1509_18723} {RNA1310_30146} {RNA815_15840} Mlig455_049412 {REF} {Length: 5999} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=111.2]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=89.0]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=21.0]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=20.1]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=238, Expect=1e-77]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=233, Expect=1e-75]} {Mouse: ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=238, Expect=1e-77]; ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=234, Expect=3e-76]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=201, Expect=4e-64]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [RH, Score=218, Expect=2e-70]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=225, Expect=3e-72]} {RNA1509_1508, RNA1509_31776, RNA1509_57530} {RNA1310_7321.1, RNA1509_1508, RNA1509_57530} {RNA1509_1508, RNA1509_57530, RNA815_2521.1}
2.	MligTC455_26615	572	11.92	Mlig455_045072	Neo: - Age: logFC(26M/2M)=-0.522		1.694	-	-	-	0.951	0.743	-	Mlig455_045072 {REF} {Length: 1124} {RNA1509_43319} {RNA1310_55165, RNA1509_43319} {RNA1509_43319, RNA815_27927}
3.	MligTC455_28203	264	5.51	Mlig455_063892	Neo: - Age: Down-Up-Down		1.692	-	-	0.739	0.953	-	-	Mlig455_063892 {REF} {Length: 889} {Smed: dd_Smed_v6_6429_0_1, dd_Smed_v6_6429_0_1, [Score=99.0, Expect=5e-22]} {RNA1509_9848} {RNA1310_13445} {RNA815_20358}
4.	MligTC455_28168	822	17.12	Mlig455_023828	Neo: - Age: -		1.676	-	-	0.724	0.952	-	-	Mlig455_023828 {REF} {Length: 3967} {Smed: dd_Smed_v6_6429_0_1, dd_Smed_v6_6429_0_1, [Score=99.0, Expect=5e-22]} {RNA1509_9848} {RNA1310_8221} {RNA815_6368.1}
5.	MligTC455_52995	685	14.27	Mlig455_027017	Neo: - Age: -		1.668	-	-	0.706	0.962	-	-	Mlig455_027017 {REF} {Length: 826} {TRANSSPLICED} {Smed: dd_Smed_v6_8079_0_1, dd_Smed_v6_8079_0_1, [Score=155, Expect=3e-49]} {RNA1509_10405, RNA1509_10969, RNA1509_13315, RNA1509_20162} {RNA1310_42303.1, RNA1509_10405, RNA1509_10969, RNA1509_13315, RNA1509_20162} {RNA1509_10405, RNA1509_10969, RNA1509_13315, RNA1509_20162, RNA815_21489}
6.	MligTC455_30514	139	2.9	Mlig455_032043	Neo: - Age: -	ABCC1	0.963	-	-	-	-	0.963	-	Mlig455_032043 {REF} {Length: 2982} {Pfam: ABC transporter transmembrane region [PF00664.25, score=133.3]; ABC transporter [PF00005.29, score=128.1]; RecF/RecN/SMC N terminal domain [PF02463.21, score=22.9]} {Human: ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=715, Expect=0.0]; ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=715, Expect=0.0]; ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=712, Expect=0.0]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=690, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=725, Expect=0.0]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=717, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=726, Expect=0.0]} {Celegans: WBGene00003413, mrp-7, [Score=637, Expect=0.0]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=687, Expect=0.0]} {RNA1509_55953} {RNA1310_11018.1} {RNA815_25227}
7.	MligTC455_39220	941	19.61	Mlig455_033864	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_033864 {REF} {Length: 2994} {TRANSSPLICED} {Pfam: FAM181 [PF15238.8, score=27.8]} {RNA1509_26930, RNA1509_8505} {RNA1310_30346.1, RNA1509_26930} {RNA1509_26930, RNA815_67.1}
8.	MligTC455_53629	701	14.6	Mlig455_041062	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.576 Region-enriched R4: 1.309/0.04615	DNAL1	0.961	-	-	-	0.961	-	-	Mlig455_041062 {REF} {Length: 943} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=51.8]; Leucine-rich repeat [PF14580.8, score=37.7]; Leucine rich repeat [PF13855.8, score=31.9]} {Human: ENSG00000119661, DNAL1, dynein axonemal light chain 1, [RH, Score=298, Expect=6e-104]} {Mouse: ENSMUSG00000042523, Dnal1, dynein, axonemal, light chain 1, [RH, Score=300, Expect=6e-105]} {Dmel: FBgn0033408, CG8800, [RH, Score=212, Expect=2e-70]} {Celegans: WBGene00015516, C06A8.6, [Score=62.8, Expect=8e-12]} {Smed: dd_Smed_v6_6302_0_1, dd_Smed_v6_6302_0_1, [RH, Score=285, Expect=1e-99]} {RNA1509_2404} {RNA1310_37933.1} {RNA815_17921}
9.	MligTC455_17387	3097	64.53	Mlig455_009773, Mlig455_054923	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.622	FAM221A	0.96	-	-	-	0.960	-	-	Mlig455_009773 {REF} {Length: 2787} {Pfam: Protein FAM221A/B [PF14753.8, score=301.8]} {Human: ENSG00000188732, FAM221A, family with sequence similarity 221 member A, [RH, Score=332, Expect=6e-114]} {Mouse: ENSMUSG00000047115, Fam221a, family with sequence similarity 221, member A, [RH, Score=325, Expect=6e-111]} {Smed: dd_Smed_v6_10324_0_1, dd_Smed_v6_10324_0_1, [RH, Score=401, Expect=3e-141]} {RNA1509_39364} {RNA1310_13611.2} {RNA815_11372} Mlig455_054923 {REF} {Length: 2730} {Pfam: Protein FAM221A/B [PF14753.8, score=301.8]} {Human: ENSG00000188732, FAM221A, family with sequence similarity 221 member A, [RH, Score=332, Expect=6e-114]} {Mouse: ENSMUSG00000047115, Fam221a, family with sequence similarity 221, member A, [RH, Score=325, Expect=6e-111]} {Smed: dd_Smed_v6_10324_0_1, dd_Smed_v6_10324_0_1, [RH, Score=401, Expect=3e-141]} {RNA1509_3690, RNA1509_39364, RNA1509_8486} {RNA1310_13611.2, RNA1509_3690, RNA1509_39364, RNA1509_8486} {RNA1509_3690, RNA1509_39364, RNA1509_8486, RNA815_11372}
10.	MligTC455_22189	82	1.71	Mlig455_046570	Neo: Irradiation Age: logFC(26M/2M)=-0.350 Region-enriched R5: 3.640/0.00155		0.96	-	-	-	-	0.960	-	Mlig455_046570 {REF} {Length: 3148} {Pfam: CDC45-like protein [PF02724.16, score=33.0]; GRAM domain [PF02893.22, score=32.2]; Nop14-like family [PF04147.14, score=24.4]; Presenilin [PF01080.19, score=22.1]} {Dmel: FBgn0085423, CG34394, [Score=51.2, Expect=1e-06]} {RNA1509_54746} {RNA1310_29343} {RNA815_28931}
11.	MligTC455_40663	570	11.87	Mlig455_048915	Neo: - Age: -	KAT6B	0.955	-	-	-	-	-	0.955	Mlig455_048915 {REF} {Length: 4020} {TRANSSPLICED} {Pfam: MOZ/SAS family [PF01853.20, score=253.4]; MYST family zinc finger domain [PF17772.3, score=59.9]; PHD-finger [PF00628.31, score=53.7]} {Human: ENSG00000156650, KAT6B, lysine acetyltransferase 6B, [RH, Score=337, Expect=2e-96]; ENSG00000083168, KAT6A, lysine acetyltransferase 6A, [RH, Score=337, Expect=1e-96]; ENSG00000281813, KAT6B, lysine acetyltransferase 6B, [RH, Score=337, Expect=2e-96]} {Mouse: ENSMUSG00000031540, Kat6a, K(lysine) acetyltransferase 6A, [RH, Score=335, Expect=7e-96]; ENSMUSG00000021767, Kat6b, K(lysine) acetyltransferase 6B, [RH, Score=332, Expect=3e-95]} {Dmel: FBgn0034975, enok, enoki mushroom, [RH, Score=332, Expect=3e-95]} {Celegans: WBGene00045419, lsy-12, Histone acetyltransferase, [RH, Score=257, Expect=2e-70]} {Smed: dd_Smed_v6_5797_0_1, dd_Smed_v6_5797_0_1, [RH, Score=331, Expect=2e-95]} {RNA1509_14256} {RNA1310_3300, RNA1509_14256} {RNA1509_14256, RNA815_11349}
12.	MligTC455_43627	1683	35.07	Mlig455_012966	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_012966 {REF} {Length: 4640} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=231.1]} {Smed: dd_Smed_v6_19123_0_8, dd_Smed_v6_19123_0_8, [Score=73.9, Expect=2e-13]} {RNA1509_10570} {RNA1310_7155.1} {RNA815_1910.1}
13.	MligTC455_48124	3676	76.59	Mlig455_051417, Mlig455_051432	Neo: - Age: Down-Up-Up		0.951	-	-	-	0.951	-	-	Mlig455_051417 {REF} {Length: 3031} {Smed: dd_Smed_v6_7960_0_1, dd_Smed_v6_7960_0_1, [RH, Score=95.1, Expect=7e-25]} {RNA1509_46977} {RNA1310_32988} {RNA815_14341} Mlig455_051432 {REF} {Length: 2527} {Smed: dd_Smed_v6_7960_0_1, dd_Smed_v6_7960_0_1, [RH, Score=95.1, Expect=7e-25]} {RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629} {RNA1310_32988, RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629} {RNA1509_20098, RNA1509_21397, RNA1509_37175, RNA1509_42608, RNA1509_46977, RNA1509_47629, RNA815_14341}
14.	MligTC455_37826	1175	24.49	Mlig455_028001	Neo: - Age: - Region-enriched R4: 1.191/0.00974	MORN5	0.95	-	-	-	0.950	-	-	Mlig455_028001 {REF} {Length: 1988} {Pfam: MORN repeat [PF02493.22, score=58.1]} {Human: ENSG00000185681, MORN5, MORN repeat containing 5, [RH, Score=239, Expect=2e-81]} {Mouse: ENSMUSG00000026894, Morn5, MORN repeat containing 5, [RH, Score=229, Expect=2e-77]} {Dmel: FBgn0036016, CG3306, [RH, Score=55.8, Expect=2e-09]} {Smed: dd_Smed_v6_7020_0_1, dd_Smed_v6_7020_0_1, [RH, Score=263, Expect=3e-91]} {RNA1509_32878} {RNA1310_34507.1} {RNA815_10362}
15.	MligTC455_47797	540	11.25	Mlig455_026443, Mlig455_026475	Neo: Int S/G2/M Age: logFC(26M/2M)=-0.381	TMEM222	0.95	-	-	-	-	-	0.950	Mlig455_026443 {REF} {Length: 6387} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF778) [PF05608.14, score=78.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=31.0]; Ring finger domain [PF13639.8, score=22.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000186501, TMEM222, transmembrane protein 222, [Score=129, Expect=3e-34]} {Mouse: ENSMUSG00000028857, Tmem222, transmembrane protein 222, [Score=124, Expect=2e-32]} {Dmel: FBgn0032000, CG8372, [Score=118, Expect=8e-31]} {Celegans: WBGene00019221, H20J04.6, [Score=124, Expect=5e-33]} {Smed: dd_Smed_v6_1946_0_2, dd_Smed_v6_1946_0_2, [Score=134, Expect=8e-37]} {RNA1509_32293} {RNA1310_12215.2} {RNA815_8332} Mlig455_026475 {REF} {Length: 2505} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=32.9]; Ring finger domain [PF13639.8, score=23.2]} {RNA1509_32293} {RNA1310_12215.2, RNA1509_32293} {RNA1509_32293, RNA815_8332}

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