TomoSeq data search

Data search

Results for MligTC455_29563

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29563

950

19.79

Mlig455_050485

Neo: -

Age: -

PRKAR1A

Mlig455_050485 {REF} {Length: 2670} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=139.8]} {Human: ENSG00000108946, PRKAR1A, protein kinase cAMP-dependent type I regulatory subunit alpha, [Score=510, Expect=0.0]; ENSG00000188191, PRKAR1B, protein kinase cAMP-dependent type I regulatory subunit beta, [Score=508, Expect=0.0]} {Mouse: ENSMUSG00000020612, Prkar1a, protein kinase, cAMP dependent regulatory, type I, alpha, [Score=512, Expect=0.0]; ENSMUSG00000025855, Prkar1b, protein kinase, cAMP dependent regulatory, type I beta, [Score=510, Expect=0.0]} {Dmel: FBgn0259243, Pka-R1, Protein kinase, cAMP-dependent, regulatory subunit type 1, [RH, Score=473, Expect=1e-166]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [RH, Score=374, Expect=2e-129]} {Smed: dd_Smed_v6_11939_0_1, dd_Smed_v6_11939_0_1, [Score=418, Expect=2e-147]} {RNA1509_20635, RNA1509_36110, RNA1509_56599, RNA1509_6871} {RNA1310_199.2, RNA1509_20635, RNA1509_36110, RNA1509_56599} {RNA1509_20635, RNA1509_36110, RNA1509_56599, RNA815_7947}

Cumulative graph for MligTC455_29563

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.44	4.65	0.60818	1.00000
RegionR2	0.194	4.65	0.57785	0.93486
RegionR3	0.106	4.65	0.69012	1.00000
RegionR4	0.72	4.65	0.04309	0.17426
RegionR5	0.247	4.65	0.31063	0.64936
RegionR6	-0.207	4.65	0.46759	1.00000
RegionR7	-0.877	4.65	0.02572	0.30081
RegionR8	-0.623	4.65	0.15651	0.71695

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.317	4.65	0.04955	0.69713
RegenerationR2	0.141	4.65	0.59135	0.91143
RegenerationR3	-0.442	4.65	0.16789	0.60228
RegenerationR4	-0.457	4.65	0.18377	0.62493
RegenerationR5	-0.121	4.65	0.67258	0.94198
RegenerationR6	-0.331	4.65	0.34351	0.68889
RegenerationBL	-0.313	4.65	0.52538	0.88607
RegenerationTP	0.057	4.65	0.90161	1.00000

Genes with expression patterns similar to MligTC455_29563

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29563	950	19.79	Mlig455_050485	Neo: - Age: -	PRKAR1A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050485 {REF} {Length: 2670} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=139.8]} {Human: ENSG00000108946, PRKAR1A, protein kinase cAMP-dependent type I regulatory subunit alpha, [Score=510, Expect=0.0]; ENSG00000188191, PRKAR1B, protein kinase cAMP-dependent type I regulatory subunit beta, [Score=508, Expect=0.0]} {Mouse: ENSMUSG00000020612, Prkar1a, protein kinase, cAMP dependent regulatory, type I, alpha, [Score=512, Expect=0.0]; ENSMUSG00000025855, Prkar1b, protein kinase, cAMP dependent regulatory, type I beta, [Score=510, Expect=0.0]} {Dmel: FBgn0259243, Pka-R1, Protein kinase, cAMP-dependent, regulatory subunit type 1, [RH, Score=473, Expect=1e-166]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [RH, Score=374, Expect=2e-129]} {Smed: dd_Smed_v6_11939_0_1, dd_Smed_v6_11939_0_1, [Score=418, Expect=2e-147]} {RNA1509_20635, RNA1509_36110, RNA1509_56599, RNA1509_6871} {RNA1310_199.2, RNA1509_20635, RNA1509_36110, RNA1509_56599} {RNA1509_20635, RNA1509_36110, RNA1509_56599, RNA815_7947}
2.	MligTC455_45322	836	17.42	Mlig455_041660	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.310 Region-enriched R4: 1.744/0.00007	NUDT18	1.833	-	-	-	0.950	0.883	-	Mlig455_041660 {REF} {Length: 2193} {TRANSSPLICED} {Pfam: NUDIX domain [PF00293.30, score=53.7]} {Human: ENSG00000275074, NUDT18, nudix hydrolase 18, [RH, Score=95.9, Expect=1e-21]} {Mouse: ENSMUSG00000045211, Nudt18, nudix (nucleoside diphosphate linked moiety X)-type motif 18, [RH, Score=92.0, Expect=2e-20]} {Dmel: FBgn0037911, CG10898, [RH, Score=91.7, Expect=2e-20]} {Celegans: WBGene00003578, ndx-1, Putative nudix hydrolase 1, [RH, Score=106, Expect=1e-25]} {Smed: dd_Smed_v6_2689_0_1, dd_Smed_v6_2689_0_1, [RH, Score=119, Expect=5e-31]} {RNA1509_20760, RNA1509_30897} {RNA1310_16185.3, RNA1509_20760, RNA1509_30897} {RNA1509_20760, RNA1509_30897, RNA815_7867}
3.	MligTC455_19172	381	7.94	Mlig455_048001	Neo: - Age: logFC(26M/2M)=-0.426	MFHAS1	1.662	-	0.701	-	0.961	-	-	Mlig455_048001 {REF} {Length: 5379} {Pfam: Leucine rich repeat [PF13855.8, score=58.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=54.9]; Leucine-rich repeat [PF14580.8, score=24.8]; Leucine Rich Repeat [PF00560.35, score=19.1]} {Human: ENSG00000147324, MFHAS1, malignant fibrous histiocytoma amplified sequence 1, [Score=77.8, Expect=1e-15]; ENSG00000285022, AC270282.1, malignant fibrous histiocytoma amplified sequence 1, [Score=77.4, Expect=2e-15]; ENSG00000137269, LRRC1, leucine rich repeat containing 1, [Score=77.4, Expect=2e-15]; ENSG00000112851, ERBIN, erbb2 interacting protein, [Score=76.3, Expect=5e-15]; ENSG00000177595, PIDD1, p53-induced death domain protein 1, [Score=75.5, Expect=9e-15]} {Mouse: ENSMUSG00000040367, Lrrd1, leucine rich repeats and death domain containing 1, [Score=115, Expect=8e-29]} {Dmel: FBgn0052687, CG32687, [Score=70.9, Expect=8e-14]} {Celegans: WBGene00021533, Y42G9A.3, [Score=91.3, Expect=5e-21]} {Smed: dd_Smed_v6_10136_0_1, dd_Smed_v6_10136_0_1, [Score=103, Expect=5e-25]} {RNA1509_18560} {RNA1310_7039.1} {RNA815_1369.1}
4.	MligTC455_32327	233	4.86	Mlig455_002541, Mlig455_047503, Mlig455_053096, Mlig455_053228	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_002541 {REF} {Length: 2728} {Pfam: DDE superfamily endonuclease [PF03184.21, score=37.8]} {RNA1310_63988} {RNA815_57890} Mlig455_047503 {REF} {Length: 2514} {Pfam: OTU-like cysteine protease [PF02338.21, score=32.7]} {RNA1310_63988} {RNA815_57890} Mlig455_053096 {REF} {Length: 2663} {Pfam: OTU-like cysteine protease [PF02338.21, score=32.7]} {RNA1310_63988} {RNA815_57890} Mlig455_053228 {REF} {Length: 2632} {Pfam: OTU-like cysteine protease [PF02338.21, score=31.4]} {RNA1310_63988} {RNA815_57890}
5.	MligTC455_35726	1689	35.18	Mlig455_025824	Neo: - Age: -	FRMD5	0.958	-	-	-	-	0.958	-	Mlig455_025824 {REF} {Length: 4351} {TRANSSPLICED} {Pfam: FERM central domain [PF00373.20, score=53.9]; FERM C-terminal PH-like domain [PF09380.12, score=45.6]; FERM N-terminal domain [PF09379.12, score=40.1]} {Human: ENSG00000171877, FRMD5, FERM domain containing 5, [Score=208, Expect=3e-59]; ENSG00000172159, FRMD3, FERM domain containing 3, [Score=199, Expect=1e-55]} {Mouse: ENSMUSG00000027238, Frmd5, FERM domain containing 5, [Score=209, Expect=2e-59]; ENSMUSG00000049122, Frmd3, FERM domain containing 3, [Score=206, Expect=4e-58]} {Dmel: FBgn0032225, CG5022, [RH, Score=197, Expect=5e-55]} {Celegans: WBGene00001491, frm-4, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=157, Expect=1e-40]} {Smed: dd_Smed_v6_6227_0_1, dd_Smed_v6_6227_0_1, [RH, Score=294, Expect=1e-90]} {RNA1509_11468} {RNA1310_11514.1} {RNA815_12229}
6.	MligTC455_21956	3873	80.68	Mlig455_016345	Neo: - Age: -	CFAP52	0.952	-	-	-	-	0.952	-	Mlig455_016345 {REF} {Length: 2469} {Pfam: WD domain, G-beta repeat [PF00400.34, score=123.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=46.2]; WD40-like domain [PF17005.7, score=20.0]} {Human: ENSG00000166596, CFAP52, cilia and flagella associated protein 52, [RH, Score=729, Expect=0.0]} {Mouse: ENSMUSG00000020904, Cfap52, cilia and flagella associated protein 52, [RH, Score=750, Expect=0.0]} {Dmel: FBgn0035724, CG10064, [Score=419, Expect=2e-137]} {Celegans: WBGene00008586, snrp-40.1, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_2585_0_1, dd_Smed_v6_2585_0_1, [RH, Score=845, Expect=0.0]} {RNA1509_26111, RNA1509_3132, RNA1509_38636} {RNA1310_7679, RNA1509_26111, RNA1509_3132, RNA1509_38636} {RNA1509_26111, RNA1509_3132, RNA1509_38636, RNA815_3001}
7.	MligTC455_25391	436	9.08	Mlig455_048144	Neo: - Age: logFC(26M/2M)=-0.311 Regeneration-depleted BL: -2.496 Regeneration-depleted R4: -1.793 Regeneration-depleted R3: -1.736	XIAP	0.952	-	-	-	-	0.952	-	Mlig455_048144 {REF} {Length: 5102} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=91.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.9]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=99.4, Expect=2e-21]} {Mouse: ENSMUSG00000032000, Birc3, baculoviral IAP repeat-containing 3, [RH, Score=84.0, Expect=6e-17]; ENSMUSG00000057367, Birc2, baculoviral IAP repeat-containing 2, [RH, Score=83.2, Expect=4e-16]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=100, Expect=3e-22]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [RH, Score=70.1, Expect=1e-12]} {RNA1509_10778} {RNA1310_11260} {RNA815_899.1}
8.	MligTC455_26210	473	9.86	Mlig455_069985	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.394		0.952	-	-	-	0.952	-	-	Mlig455_069985 {REF} {Length: 3344} {Pfam: P21-Rho-binding domain [PF00786.30, score=33.2]} {RNA1509_9659} {RNA1310_11243.1} {RNA815_9336}

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