TomoSeq data search

Data search

Results for MligTC455_32327

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32327

233

4.86

Mlig455_002541, Mlig455_047503, Mlig455_053096, Mlig455_053228

Neo: -

Age: -

Mlig455_002541 {REF} {Length: 2728} {Pfam: DDE superfamily endonuclease [PF03184.21, score=37.8]} {RNA1310_63988} {RNA815_57890}

Mlig455_047503 {REF} {Length: 2514} {Pfam: OTU-like cysteine protease [PF02338.21, score=32.7]} {RNA1310_63988} {RNA815_57890}

Mlig455_053096 {REF} {Length: 2663} {Pfam: OTU-like cysteine protease [PF02338.21, score=32.7]} {RNA1310_63988} {RNA815_57890}

Mlig455_053228 {REF} {Length: 2632} {Pfam: OTU-like cysteine protease [PF02338.21, score=31.4]} {RNA1310_63988} {RNA815_57890}

Cumulative graph for MligTC455_32327

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.293	2.865	0.99971	1.00000
RegionR2	2.413	2.865	0.07519	0.33565
RegionR3	-0.466	2.865	0.87011	1.00000
RegionR4	1.333	2.865	0.28976	0.60021
RegionR5	0.08	2.865	0.73527	1.00000
RegionR6	1.087	2.865	0.38093	0.96046
RegionR7	2.221	2.865	0.10380	0.61286
RegionR8	-3.376	2.865	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.409	2.865	0.99990	1.00000
RegenerationR2	0.998	2.865	0.21296	0.66008
RegenerationR3	2.522	2.865	0.02329	0.27483
RegenerationR4	0.187	2.865	0.85132	1.00000
RegenerationR5	2.771	2.865	0.00399	0.11298
RegenerationR6	0.095	2.865	0.93222	1.00000
RegenerationBL	2.605	2.865	0.06854	0.30454
RegenerationTP	3.387	2.865	0.05983	0.39666

Genes with expression patterns similar to MligTC455_32327

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32327	233	4.86	Mlig455_002541, Mlig455_047503, Mlig455_053096, Mlig455_053228	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002541 {REF} {Length: 2728} {Pfam: DDE superfamily endonuclease [PF03184.21, score=37.8]} {RNA1310_63988} {RNA815_57890} Mlig455_047503 {REF} {Length: 2514} {Pfam: OTU-like cysteine protease [PF02338.21, score=32.7]} {RNA1310_63988} {RNA815_57890} Mlig455_053096 {REF} {Length: 2663} {Pfam: OTU-like cysteine protease [PF02338.21, score=32.7]} {RNA1310_63988} {RNA815_57890} Mlig455_053228 {REF} {Length: 2632} {Pfam: OTU-like cysteine protease [PF02338.21, score=31.4]} {RNA1310_63988} {RNA815_57890}
2.	MligTC455_44444	123	2.57	Mlig455_062758	Neo: - Age: -		1.742	0.791	-	-	0.951	-	-	Mlig455_062758 {REF} {Length: 1304} {Pfam: Retinal tissue protein [PF10044.11, score=28.1]} {RNA1509_3524} {RNA1310_10649.1} {RNA815_4708.1}
3.	MligTC455_33631	517	10.76	Mlig455_049914	Neo: - Age: -		1.674	-	-	0.706	0.968	-	-	Mlig455_049914 {REF} {Length: 852} {NoTransDecoderORF} {RNA1509_55678} {RNA1310_47811.1} {RNA815_24394.1}
4.	MligTC455_08626	34	0.7	Mlig455_016338	Neo: - Age: -		0.976	-	-	-	-	-	0.976	Mlig455_016338 {REF} {Length: 1057} {NoTransDecoderORF}
5.	MligTC455_34325	618	12.87	Mlig455_031158	Neo: - Age: Up-Down-Down Region-enriched R2: 1.728/0.02665	DYNC2H1	0.974	-	-	-	0.974	-	-	Mlig455_031158 {REF} {Length: 13428} {TRANSSPLICED} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=416.4]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=367.3]; ATP-binding dynein motor region [PF12781.9, score=251.0]; P-loop containing dynein motor region D4 [PF12780.9, score=174.0]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=151.3]; Dynein heavy chain C-terminal domain [PF18199.3, score=136.1]; Dynein heavy chain AAA lid domain [PF18198.3, score=127.7]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=127.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=114.9]; Microtubule-binding stalk of dynein motor [PF12777.9, score=87.0]; P-loop containing dynein motor region [PF12775.9, score=85.5]; AAA ATPase domain [PF13191.8, score=37.1]; AAA domain [PF13401.8, score=34.2]; AAA domain [PF13604.8, score=25.8]; ABC transporter [PF00005.29, score=25.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.9]; AAA domain [PF13238.8, score=21.9]; RsgA GTPase [PF03193.18, score=21.7]; AAA domain [PF13479.8, score=21.6]; P-loop containing region of AAA domain [PF13555.8, score=21.6]; Midasin AAA lid domain [PF17867.3, score=20.9]; Rad17 P-loop domain [PF03215.17, score=18.9]; Type II/IV secretion system protein [PF00437.22, score=18.5]} {Human: ENSG00000187240, DYNC2H1, dynein cytoplasmic 2 heavy chain 1, [RH, Score=5051, Expect=0.0]} {Mouse: ENSMUSG00000047193, Dync2h1, dynein cytoplasmic 2 heavy chain 1, [RH, Score=5050, Expect=0.0]} {Dmel: FBgn0023096, btv, beethoven, [RH, Score=2032, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [RH, Score=3126, Expect=0.0]} {Smed: dd_Smed_v6_9136_0_1, dd_Smed_v6_9136_0_1, [RH, Score=5136, Expect=0.0]} {RNA1509_946} {RNA1310_60} {RNA815_24}
6.	MligTC455_21739	164	3.41	Mlig455_007931	Neo: - Age: - Region-enriched R2: 2.596/0.04280	CCDC150	0.972	-	-	-	0.972	-	-	Mlig455_007931 {REF} {Length: 3798} {TRANSSPLICED} {Human: ENSG00000144395, CCDC150, coiled-coil domain containing 150, [RH, Score=82.0, Expect=3e-15]} {Mouse: ENSMUSG00000025983, Ccdc150, coiled-coil domain containing 150, [RH, Score=75.5, Expect=3e-13]} {RNA1509_19254} {RNA1310_9574} {RNA815_22339}
7.	MligTC455_22435	71	1.48	Mlig455_000364, Mlig455_046129	Neo: - Age: -		0.97	-	-	-	-	-	0.970	Mlig455_000364 {REF} {Length: 224} {NoTransDecoderORF} {RNA1509_56084} {RNA1310_16313} {RNA815_60226} Mlig455_046129 {REF} {Length: 213} {NoTransDecoderORF} {RNA1509_56084} {RNA1310_16313} {RNA815_60226}
8.	MligTC455_13977	1496	31.16	Mlig455_039726	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.608	CXorf65	0.967	-	-	-	0.967	-	-	Mlig455_039726 {REF} {Length: 962} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=76.8]} {Human: ENSG00000204165, CXorf65, chromosome X open reading frame 65, [RH, Score=52.0, Expect=3e-08]} {Mouse: ENSMUSG00000090141, Gm614, predicted gene 614, [RH, Score=53.9, Expect=4e-09]} {RNA1509_44868, RNA1509_8992} {RNA1310_45539.1, RNA1509_44868, RNA1509_8992} {RNA1509_44868, RNA1509_8992, RNA815_12228}
9.	MligTC455_48715	129	2.7	Mlig455_015244	Neo: - Age: logFC(26M/2M)=-0.557		0.966	-	-	-	0.966	-	-	Mlig455_015244 {REF} {Length: 1838} {RNA1509_39666} {RNA1310_16691.2, RNA1509_39666} {RNA1509_39666, RNA815_18464}
10.	MligTC455_28962	77	1.61	Mlig455_049735, Mlig455_056147	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_049735 {REF} {Length: 5656} {TRANSSPLICED} {RNA1310_30688} {RNA815_22497} Mlig455_056147 {REF} {Length: 1708} {TRANSSPLICED} {RNA1310_30688} {RNA815_22497}
11.	MligTC455_29563	950	19.79	Mlig455_050485	Neo: - Age: -	PRKAR1A	0.963	-	-	-	0.963	-	-	Mlig455_050485 {REF} {Length: 2670} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=139.8]} {Human: ENSG00000108946, PRKAR1A, protein kinase cAMP-dependent type I regulatory subunit alpha, [Score=510, Expect=0.0]; ENSG00000188191, PRKAR1B, protein kinase cAMP-dependent type I regulatory subunit beta, [Score=508, Expect=0.0]} {Mouse: ENSMUSG00000020612, Prkar1a, protein kinase, cAMP dependent regulatory, type I, alpha, [Score=512, Expect=0.0]; ENSMUSG00000025855, Prkar1b, protein kinase, cAMP dependent regulatory, type I beta, [Score=510, Expect=0.0]} {Dmel: FBgn0259243, Pka-R1, Protein kinase, cAMP-dependent, regulatory subunit type 1, [RH, Score=473, Expect=1e-166]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [RH, Score=374, Expect=2e-129]} {Smed: dd_Smed_v6_11939_0_1, dd_Smed_v6_11939_0_1, [Score=418, Expect=2e-147]} {RNA1509_20635, RNA1509_36110, RNA1509_56599, RNA1509_6871} {RNA1310_199.2, RNA1509_20635, RNA1509_36110, RNA1509_56599} {RNA1509_20635, RNA1509_36110, RNA1509_56599, RNA815_7947}
12.	MligTC455_12013	25	0.52	Mlig455_011463	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_011463 {REF} {Length: 826} {NoTransDecoderORF} {RNA1310_97403}
13.	MligTC455_24094	881	18.35	Mlig455_013384	Neo: - Age: logFC(26M/2M)=-0.379	FAT4	0.961	-	-	-	0.961	-	-	Mlig455_013384 {REF} {Length: 10082} {Pfam: Cadherin domain [PF00028.19, score=873.7]; Cadherin-like [PF16184.7, score=117.8]; Cadherin-like [PF08266.14, score=37.7]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=614, Expect=3e-176]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=610, Expect=3e-175]} {Dmel: FBgn0001075, ft, fat, [Score=483, Expect=2e-136]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=265, Expect=3e-70]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=296, Expect=8e-80]} {RNA1509_18808, RNA1509_37372, RNA1509_41735, RNA1509_43667} {RNA1310_91.1, RNA1509_37372, RNA1509_41735, RNA1509_43667} {RNA1509_37372, RNA1509_41735, RNA1509_43667, RNA815_45.1}
14.	MligTC455_24941	188	3.92	Mlig455_011277	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_011277 {REF} {Length: 236} {NoTransDecoderORF} {RNA1509_25592}
15.	MligTC455_36892	196	4.09	Mlig455_014059	Neo: - Age: -		0.956	-	-	0.956	-	-	-	Mlig455_014059 {REF} {Length: 1934} {RNA1509_56729} {RNA1310_13361} {RNA815_23265}
16.	MligTC455_23617	4708	98.09	Mlig455_008651, Mlig455_069417	Neo: - Age: -	C5orf49	0.954	-	-	-	0.954	-	-	Mlig455_008651 {REF} {Length: 762} {Pfam: Domain of unknown function (DUF4541) [PF15074.8, score=117.5]} {Human: ENSG00000215217, C5orf49, chromosome 5 open reading frame 49, [RH, Score=97.4, Expect=9e-26]} {Mouse: ENSMUSG00000021534, 1700001L19Rik, RIKEN cDNA 1700001L19 gene, [RH, Score=103, Expect=5e-28]} {Smed: dd_Smed_v6_6211_0_1, dd_Smed_v6_6211_0_1, [RH, Score=136, Expect=1e-41]} {RNA1509_14600} {RNA1310_49397} {RNA815_23943.1} Mlig455_069417 {REF} {Length: 762} {Pfam: Domain of unknown function (DUF4541) [PF15074.8, score=117.5]} {Human: ENSG00000215217, C5orf49, chromosome 5 open reading frame 49, [RH, Score=97.4, Expect=9e-26]} {Mouse: ENSMUSG00000021534, 1700001L19Rik, RIKEN cDNA 1700001L19 gene, [RH, Score=103, Expect=5e-28]} {Smed: dd_Smed_v6_6211_0_1, dd_Smed_v6_6211_0_1, [RH, Score=136, Expect=1e-41]} {RNA1509_14600, RNA1509_24973} {RNA1310_49397, RNA1509_14600, RNA1509_24973} {RNA1509_14600, RNA1509_24973, RNA815_23943.1}
17.	MligTC455_27366	36262	755.45	Mlig455_040596, Mlig455_040607, Mlig455_062037	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.976 Region-enriched R4: 2.015/0.00241 Region-enriched R8: 1.429/0.04613		0.954	-	-	-	0.954	-	-	Mlig455_040596 {REF} {Length: 917} {RNA1509_1252} {RNA1310_61787} {RNA815_19934.1} Mlig455_040607 {REF} {Length: 1621} {RNA1509_1252} {RNA1310_61787} {RNA815_19934.1} Mlig455_062037 {REF} {Length: 2344} {RNA1509_1252} {RNA1310_61787} {RNA815_19934.1}
18.	MligTC455_24781	664	13.83	Mlig455_056890	Neo: - Age: -	TTLL3	0.952	-	-	-	0.952	-	-	Mlig455_056890 {REF} {Length: 4523} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=246.0]; YheC/D like ATP-grasp [PF14398.8, score=22.3]} {Human: ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=419, Expect=7e-138]; ENSG00000138892, TTLL8, tubulin tyrosine ligase like 8, [Score=417, Expect=5e-133]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=451, Expect=3e-145]; ENSMUSG00000022388, Ttll8, tubulin tyrosine ligase-like family, member 8, [Score=434, Expect=8e-140]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [Score=267, Expect=2e-76]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=113, Expect=1e-26]} {Smed: dd_Smed_v6_10244_0_3, dd_Smed_v6_10244_0_3, [Score=549, Expect=0.0]} {RNA1509_39964, RNA1509_51119, RNA1509_8170} {RNA1310_3822, RNA1509_39964, RNA1509_51119} {RNA1509_39964, RNA1509_51119, RNA815_867}
19.	MligTC455_49220	49	1.01	Mlig455_035853	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_035853 {REF} {Length: 1375} {RNA1509_52052} {RNA1310_50539} {RNA815_453.2}

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