Data search
Results for MligTC455_29574
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29574 | 515 | 10.73 | Mlig455_050384 | Neo: - Age: Down-Down-Up |
TRAF3 | Mlig455_050384 {REF} {Length: 2521} {Pfam: TRAF-type zinc finger [PF02176.20, score=31.8]; zinc-finger of a C2HC-type [PF13913.8, score=23.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.9]; zf-RING of BARD1-type protein [PF14835.8, score=19.2]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [RH, Score=303, Expect=2e-95]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [RH, Score=301, Expect=8e-95]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=122, Expect=1e-29]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=101, Expect=9e-23]} {Smed: dd_Smed_v6_4148_0_1, dd_Smed_v6_4148_0_1, [RH, Score=186, Expect=4e-53]} {RNA1509_37811} {RNA1310_11544} {RNA815_4083.1} |
Cumulative graph for MligTC455_29574
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.161 | 3.811 | 0.91833 | 1.00000 | |
| RegionR2 | 0.893 | 3.811 | 0.33148 | 0.72341 | |
| RegionR3 | 0.329 | 3.811 | 0.64673 | 1.00000 | |
| RegionR4 | -0.921 | 3.811 | 0.32957 | 0.64767 | |
| RegionR5 | -0.894 | 3.811 | 0.20615 | 0.49982 | |
| RegionR6 | -0.038 | 3.811 | 0.95351 | 1.00000 | |
| RegionR7 | 0.526 | 3.811 | 0.50402 | 1.00000 | |
| RegionR8 | 0.267 | 3.811 | 0.78632 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.587 | 3.811 | 0.42320 | 1.00000 | |
| RegenerationR2 | -0.26 | 3.811 | 0.77583 | 0.98219 | |
| RegenerationR3 | -0.953 | 3.811 | 0.34245 | 0.76664 | |
| RegenerationR4 | -0.23 | 3.811 | 0.82823 | 0.99704 | |
| RegenerationR5 | -0.57 | 3.811 | 0.56311 | 0.89305 | |
| RegenerationR6 | -0.628 | 3.811 | 0.51958 | 0.82030 | |
| RegenerationBL | -0.173 | 3.811 | 0.85616 | 1.00000 | |
| RegenerationTP | -1.809 | 3.811 | 0.14867 | 0.57274 |
Genes with expression patterns similar to MligTC455_29574
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29574 | 515 | 10.73 | Mlig455_050384 | Neo: - Age: Down-Down-Up |
TRAF3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050384 {REF} {Length: 2521} {Pfam: TRAF-type zinc finger [PF02176.20, score=31.8]; zinc-finger of a C2HC-type [PF13913.8, score=23.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.9]; zf-RING of BARD1-type protein [PF14835.8, score=19.2]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [RH, Score=303, Expect=2e-95]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [RH, Score=301, Expect=8e-95]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=122, Expect=1e-29]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=101, Expect=9e-23]} {Smed: dd_Smed_v6_4148_0_1, dd_Smed_v6_4148_0_1, [RH, Score=186, Expect=4e-53]} {RNA1509_37811} {RNA1310_11544} {RNA815_4083.1} |
| 2. | MligTC455_25388 | 896 | 18.66 | Mlig455_012095 | Neo: - Age: - |
BIRC8 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_012095 {REF} {Length: 5636} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=81.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=47.6]; Prokaryotic RING finger family 4 [PF14447.8, score=20.1]} {Human: ENSG00000163098, BIRC8, baculoviral IAP repeat containing 8, [RH, Score=95.9, Expect=9e-22]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [RH, Score=116, Expect=3e-27]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [RH, Score=135, Expect=1e-33]} {Celegans: WBGene00017342, F10D7.5, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [RH, Score=66.6, Expect=1e-11]} {RNA1509_10778, RNA1509_13554} {RNA1310_3284.1, RNA1509_13554} {RNA1509_13554, RNA815_964.1} |
| 3. | MligTC455_32066 | 127 | 2.64 | Mlig455_048493 | Neo: - Age: Up-Down-Down |
SLC17A9 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_048493 {REF} {Length: 5594} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=149.1]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=303, Expect=1e-97]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=301, Expect=4e-97]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [Score=300, Expect=1e-96]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=313, Expect=5e-102]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [Score=394, Expect=3e-133]} {RNA1509_17119} {RNA1310_13718, RNA1509_17119} {RNA1509_17119, RNA815_7003} |
| 4. | MligTC455_17000 | 441 | 9.19 | Mlig455_000252 | Neo: - Age: - |
PDHX | 0.952 | - | - | - | - | 0.952 | - | Mlig455_000252 {REF} {Length: 3210} {Pfam: Biotin-requiring enzyme [PF00364.24, score=58.7]; e3 binding domain [PF02817.19, score=21.9]} {Human: ENSG00000110435, PDHX, pyruvate dehydrogenase complex component X, [Score=117, Expect=1e-27]} {Mouse: ENSMUSG00000010914, Pdhx, pyruvate dehydrogenase complex, component X, [Score=129, Expect=6e-32]} {Dmel: FBgn0283658, muc, midline uncoordinated, [Score=76.6, Expect=1e-14]} {Celegans: WBGene00009082, dlat-1, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, [Score=89.4, Expect=1e-18]} {Smed: dd_Smed_v6_4750_0_1, dd_Smed_v6_4750_0_1, [Score=142, Expect=5e-37]} {RNA1509_34085} {RNA1310_25322} {RNA815_22388} |
| 5. | MligTC455_19506 | 1421 | 29.59 | Mlig455_060209, Mlig455_070469 | Neo: - Age: - Region-enriched R4: 1.104/0.02473 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_060209 {REF} {Length: 2136} {TRANSSPLICED} {Smed: dd_Smed_v6_5805_0_1, dd_Smed_v6_5805_0_1, [RH, Score=55.5, Expect=1e-08]} {RNA1509_15119, RNA1509_25650, RNA1509_59084} {RNA1310_11115.1, RNA1509_15119, RNA1509_59084} {RNA1509_15119, RNA1509_59084, RNA815_26876} Mlig455_070469 {REF} {Length: 2464} {Smed: dd_Smed_v6_5805_0_1, dd_Smed_v6_5805_0_1, [RH, Score=55.5, Expect=1e-08]} {RNA1509_25650} {RNA1310_11115.1} {RNA815_26876} |
|
| 6. | MligTC455_28224 | 45 | 0.93 | Mlig455_058819 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_058819 {REF} {Length: 2625} {NoTransDecoderORF} {RNA1509_47220} {RNA1310_570.1} {RNA815_1084.2} | |
| 7. | MligTC455_33396 | 487 | 10.16 | Mlig455_055919 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.313 Region-enriched R2: 2.574/0.00387 |
DNAH1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_055919 {REF} {Length: 12844} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=520.4]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=433.6]; Dynein heavy chain C-terminal domain [PF18199.3, score=396.5]; P-loop containing dynein motor region D4 [PF12780.9, score=336.0]; ATP-binding dynein motor region [PF12781.9, score=305.8]; P-loop containing dynein motor region [PF12775.9, score=271.1]; Microtubule-binding stalk of dynein motor [PF12777.9, score=165.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=161.1]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=155.0]; Dynein heavy chain AAA lid domain [PF17852.3, score=107.7]; AAA+ lid domain [PF17857.3, score=77.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=73.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.9]; AAA domain [PF13238.8, score=29.9]; AAA domain [PF13401.8, score=28.7]; AAA ATPase domain [PF13191.8, score=20.5]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.7]; DEAD/DEAH box helicase [PF00270.31, score=18.8]; Type III restriction enzyme, res subunit [PF04851.17, score=18.8]} {Human: ENSG00000114841, DNAH1, dynein axonemal heavy chain 1, [RH, Score=5214, Expect=0.0]} {Mouse: ENSMUSG00000019027, Dnah1, dynein, axonemal, heavy chain 1, [RH, Score=5198, Expect=0.0]} {Dmel: FBgn0013810, Dhc36C, Dynein heavy chain at 36C, [Score=2866, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1304, Expect=0.0]} {Smed: dd_Smed_v6_6790_0_1, dd_Smed_v6_6790_0_1, [RH, Score=4107, Expect=0.0]} {RNA1509_1216} {RNA1310_62} {RNA815_116.1} |
| 8. | MligTC455_34500 | 3224 | 67.16 | Mlig455_029770, Mlig455_029924 | Neo: - Age: logFC(26M/2M)=0.194 |
NPLOC4 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_029770 {REF} {Length: 3121} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=297.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=42.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=431, Expect=9e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=434, Expect=2e-145]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=398, Expect=3e-131]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=359, Expect=1e-117]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=421, Expect=3e-140]} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA1509_6797} {RNA1310_13992, RNA1509_24296, RNA1509_30091, RNA1509_32827} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA815_5567} Mlig455_029924 {REF} {Length: 3589} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=298.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=41.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=433, Expect=1e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=438, Expect=9e-147]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=402, Expect=9e-133]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=361, Expect=4e-118]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=427, Expect=2e-142]} {RNA1509_6797} {RNA1310_13992} {RNA815_5567} |
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