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Results for MligTC455_34500

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34500 3224 67.16 Mlig455_029770, Mlig455_029924

Neo: -

Age: logFC(26M/2M)=0.194

 NPLOC4

Mlig455_029770 {REF} {Length: 3121} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=297.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=42.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=431, Expect=9e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=434, Expect=2e-145]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=398, Expect=3e-131]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=359, Expect=1e-117]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=421, Expect=3e-140]} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA1509_6797} {RNA1310_13992, RNA1509_24296, RNA1509_30091, RNA1509_32827} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA815_5567}

Mlig455_029924 {REF} {Length: 3589} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=298.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=41.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=433, Expect=1e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=438, Expect=9e-147]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=402, Expect=9e-133]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=361, Expect=4e-118]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=427, Expect=2e-142]} {RNA1509_6797} {RNA1310_13992} {RNA815_5567}

Cumulative graph for MligTC455_34500

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.756 6.23 0.17163 0.79728
RegionR2 -0.378 6.23 0.23355 0.60678
RegionR3 -0.135 6.23 0.60481 1.00000
RegionR4 0.812 6.23 0.00552 0.03924
RegionR5 0.827 6.23 0.00036 0.00457
RegionR6 0.473 6.23 0.05921 0.45645
RegionR7 -0.379 6.23 0.21725 0.83523
RegionR8 -0.463 6.23 0.20296 0.80181

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.576 6.23 0.40287 1.00000
RegenerationR2 0.213 6.23 0.48450 0.86517
RegenerationR3 -0.155 6.23 0.62995 0.92029
RegenerationR4 -0.854 6.23 0.00886 0.14109
RegenerationR5 -0.4 6.23 0.18340 0.61365
RegenerationR6 -0.313 6.23 0.31934 0.66633
RegenerationBL 0.311 6.23 0.31435 0.68039
RegenerationTP 0.304 6.23 0.38787 0.82135


Genes with expression patterns similar to MligTC455_34500

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34500 3224 67.16 Mlig455_029770, Mlig455_029924

Neo: -

Age: logFC(26M/2M)=0.194

 NPLOC4 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_029770 {REF} {Length: 3121} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=297.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=42.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=431, Expect=9e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=434, Expect=2e-145]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=398, Expect=3e-131]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=359, Expect=1e-117]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=421, Expect=3e-140]} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA1509_6797} {RNA1310_13992, RNA1509_24296, RNA1509_30091, RNA1509_32827} {RNA1509_24296, RNA1509_30091, RNA1509_32827, RNA815_5567}

Mlig455_029924 {REF} {Length: 3589} {TRANSSPLICED} {Pfam: NPL4 family [PF05021.17, score=298.1]; NPL4 family, putative zinc binding region [PF05020.17, score=135.9]; Nuclear pore localisation protein NPL4 [PF11543.10, score=41.7]} {Human: ENSG00000182446, NPLOC4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=433, Expect=1e-144]} {Mouse: ENSMUSG00000039703, Nploc4, NPL4 homolog, ubiquitin recognition factor, [RH, Score=438, Expect=9e-147]} {Dmel: FBgn0039348, Npl4, Nuclear protein localization 4, [RH, Score=402, Expect=9e-133]} {Celegans: WBGene00019121, npl-4.2, NPL (Yeast Nuclear Protein Localization) homolog, [RH, Score=361, Expect=4e-118]} {Smed: dd_Smed_v6_5277_0_1, dd_Smed_v6_5277_0_1, [RH, Score=427, Expect=2e-142]} {RNA1509_6797} {RNA1310_13992} {RNA815_5567}
2. MligTC455_36682 1577 32.86 Mlig455_059315

Neo: -

Age: -

Region-enriched R4: 1.145/0.00582

 1.75 - - - 0.784 0.966 - Mlig455_059315 {REF} {Length: 959} {TRANSSPLICED} {RNA1509_18781, RNA1509_41099, RNA1509_54262} {RNA1310_29632, RNA1509_18781, RNA1509_41099, RNA1509_54262} {RNA1509_18781, RNA1509_41099, RNA1509_54262, RNA815_17983}
3. MligTC455_27742 216 4.49 Mlig455_020706

Neo: Irradiation

Age: -

Region-enriched R2: 4.070/0.03422
Region-enriched R5: 2.875/0.00106

 TMED3 0.977 - - - - 0.977 - Mlig455_020706 {REF} {Length: 1854} {TRANSSPLICED} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=82.1]} {Human: ENSG00000166557, TMED3, transmembrane p24 trafficking protein 3, [Score=75.9, Expect=4e-15]; ENSG00000117500, TMED5, transmembrane p24 trafficking protein 5, [Score=73.9, Expect=2e-14]} {Mouse: ENSMUSG00000063406, Tmed5, transmembrane p24 trafficking protein 5, [Score=74.7, Expect=7e-15]; ENSMUSG00000032353, Tmed3, transmembrane p24 trafficking protein 3, [Score=73.9, Expect=1e-14]} {Dmel: FBgn0051787, CG31787, [Score=73.9, Expect=9e-15]} {Celegans: WBGene00010670, K08E4.6, [Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_3127_0_1, dd_Smed_v6_3127_0_1, [Score=84.7, Expect=4e-18]} {RNA1509_20798} {RNA1310_17461} {RNA815_5363}
4. MligTC455_09928 15 0.32 Mlig455_054376

Neo: -

Age: -

 DUT 0.976 - - - - 0.976 - Mlig455_054376 {REF} {Length: 486} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=115.5]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=99.8, Expect=6e-26]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=97.1, Expect=4e-25]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=97.4, Expect=4e-25]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=100, Expect=2e-24]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=94.0, Expect=3e-24]} {RNA1509_34347} {RNA1310_47056} {RNA815_19475}
5. MligTC455_51108 16 0.32 Mlig455_054372

Neo: -

Age: -

 DUT 0.969 - - - - 0.969 - Mlig455_054372 {REF} {Length: 758} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=115.5]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=99.8, Expect=6e-26]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=97.1, Expect=4e-25]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=97.4, Expect=4e-25]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=100, Expect=2e-24]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=94.0, Expect=3e-24]} {RNA1509_34347} {RNA1310_47056} {RNA815_19475}
6. MligTC455_36921 1688 35.18 Mlig455_025773, Mlig455_064418

Neo: -

Age: -

Region-enriched R5: 1.081/0.00614

 PTDSS1 0.962 - - - - 0.962 -

Mlig455_025773 {REF} {Length: 3227} {Pfam: Phosphatidyl serine synthase [PF03034.17, score=334.9]} {Human: ENSG00000156471, PTDSS1, phosphatidylserine synthase 1, [RH, Score=415, Expect=2e-141]} {Mouse: ENSMUSG00000021518, Ptdss1, phosphatidylserine synthase 1, [RH, Score=419, Expect=6e-143]} {Dmel: FBgn0037010, CG4825, [RH, Score=430, Expect=3e-147]} {Celegans: WBGene00013920, pssy-1, PhosphatidylSerine SYnthase, [RH, Score=399, Expect=5e-135]} {Smed: dd_Smed_v6_2855_0_1, dd_Smed_v6_2855_0_1, [RH, Score=522, Expect=0.0]} {RNA1509_5770} {RNA1310_323} {RNA815_5210.1}

Mlig455_064418 {REF} {Length: 2678} {TRANSSPLICED} {Pfam: Phosphatidyl serine synthase [PF03034.17, score=334.9]} {Human: ENSG00000156471, PTDSS1, phosphatidylserine synthase 1, [RH, Score=415, Expect=2e-141]} {Mouse: ENSMUSG00000021518, Ptdss1, phosphatidylserine synthase 1, [RH, Score=419, Expect=6e-143]} {Dmel: FBgn0037010, CG4825, [RH, Score=430, Expect=3e-147]} {Celegans: WBGene00013920, pssy-1, PhosphatidylSerine SYnthase, [RH, Score=399, Expect=5e-135]} {Smed: dd_Smed_v6_2855_0_1, dd_Smed_v6_2855_0_1, [RH, Score=522, Expect=0.0]} {RNA1509_5770} {RNA1310_323} {RNA815_5210.1}
7. MligTC455_28252 65 1.35 Mlig455_036681

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-1.253

 0.959 - - - - 0.959 - Mlig455_036681 {REF} {Length: 2069} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=64.3, Expect=1e-14]} {RNA1509_20999} {RNA1310_76277} {RNA815_7836.4}
8. MligTC455_35855 36 0.74 Mlig455_057980

Neo: Irradiation

Age: -

 0.959 - - - - 0.959 - Mlig455_057980 {REF} {Length: 3238} {TRANSSPLICED} {RNA1509_13251} {RNA1310_8663, RNA1509_13251} {RNA1509_13251, RNA815_11077}
9. MligTC455_35856 35 0.72 Mlig455_070752

Neo: -

Age: Up-Down-Down

 0.959 - - - - 0.959 - Mlig455_070752 {REF} {Length: 5912} {TRANSSPLICED} {RNA1509_13251} {RNA1310_4626} {RNA815_11077}
10. MligTC455_44466 754 15.72 Mlig455_016317

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.957/0.00000
Region-enriched R7: 1.859/0.00811

 HMCN1 0.958 - - - - 0.958 - Mlig455_016317 {REF} {Length: 3731} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=135.0]; Spondin-like TSP1 domain [PF19028.2, score=100.0]; CCN3 Nov like TSP1 domain [PF19035.2, score=39.9]; Thrombospondin type 1 domain [PF19030.2, score=32.2]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=161, Expect=4e-41]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=132, Expect=2e-31]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=70.1, Expect=4e-12]} {Celegans: WBGene00011880, T21B6.3, [Score=120, Expect=3e-28]} {Smed: dd_Smed_v6_2783_0_1, dd_Smed_v6_2783_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_46355} {RNA1310_4790} {RNA815_4915}
11. MligTC455_21011 30 0.63 Mlig455_043892

Neo: -

Age: -

 KREMEN1 0.957 - - - - 0.957 - Mlig455_043892 {REF} {Length: 1488} {Pfam: WSC domain [PF01822.21, score=102.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=53.5, Expect=1e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=66.2, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=56.2, Expect=9e-09]} {RNA1509_22214} {RNA1310_95335} {RNA815_43018}
12. MligTC455_39440 1122 23.36 Mlig455_018887

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.697

 GGA1 0.957 0.957 - - - - - Mlig455_018887 {REF} {Length: 3456} {Pfam: VHS domain [PF00790.21, score=117.5]; GAT domain [PF03127.16, score=56.7]; N-terminal extension of GAT domain [PF18308.3, score=54.8]} {Human: ENSG00000100083, GGA1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=290, Expect=2e-87]; ENSG00000125447, GGA3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=283, Expect=4e-84]} {Mouse: ENSMUSG00000020740, Gga3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=292, Expect=1e-88]; ENSMUSG00000033128, Gga1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=287, Expect=6e-87]} {Dmel: FBgn0030141, Gga, Golgi-localized, gamma-adaptin ear containing, ARF binding protein, [RH, Score=134, Expect=2e-32]} {Celegans: WBGene00000166, apt-9, AdaPTin or adaptin-related protein, [RH, Score=125, Expect=7e-30]} {Smed: dd_Smed_v6_4823_0_1, dd_Smed_v6_4823_0_1, [RH, Score=302, Expect=3e-92]} {RNA1509_2954} {RNA1310_3894.1} {RNA815_4766.1}
13. MligTC455_21168 3643 75.89 Mlig455_026060

Neo: -

Age: Down-Up-Up

 RDX 0.956 - - - 0.956 - - Mlig455_026060 {REF} {Length: 3030} {TRANSSPLICED} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=109.7]; FERM C-terminal PH-like domain [PF09380.12, score=87.7]; FERM central domain [PF00373.20, score=85.7]; FERM N-terminal domain [PF09379.12, score=67.8]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=602, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=593, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=601, Expect=0.0]; ENSMUSG00000052397, Ezr, ezrin, [RH, Score=585, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=580, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=583, Expect=0.0]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [RH, Score=588, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [RH, Score=516, Expect=5e-179]} {RNA1509_10036, RNA1509_12465, RNA1509_18141, RNA1509_27085, RNA1509_47716, RNA1509_58121, RNA1509_5927, RNA1509_895} {RNA1310_6787, RNA1509_10036, RNA1509_12465, RNA1509_18141, RNA1509_27085, RNA1509_47716, RNA1509_58121, RNA1509_5927, RNA1509_895} {RNA1509_10036, RNA1509_12465, RNA1509_18141, RNA1509_27085, RNA1509_47716, RNA1509_58121, RNA1509_5927, RNA1509_895, RNA815_1582.1}
14. MligTC455_37389 138 2.87 Mlig455_034428

Neo: -

Age: -

 GORASP2 0.952 - - - - 0.952 - Mlig455_034428 {REF} {Length: 2293} {Pfam: GRASP55/65 PDZ-like domain [PF04495.16, score=238.8]; PDZ domain [PF17820.3, score=36.2]; PDZ domain [PF13180.8, score=27.4]} {Human: ENSG00000115806, GORASP2, golgi reassembly stacking protein 2, [RH, Score=341, Expect=7e-114]} {Mouse: ENSMUSG00000014959, Gorasp2, golgi reassembly stacking protein 2, [RH, Score=338, Expect=6e-113]} {Dmel: FBgn0036919, Grasp65, [RH, Score=326, Expect=4e-108]} {Celegans: WBGene00021536, Y42H9AR.1, [RH, Score=319, Expect=5e-105]} {Smed: dd_Smed_v6_1209_0_1, dd_Smed_v6_1209_0_1, [RH, Score=335, Expect=2e-113]} {RNA1509_3979} {RNA1310_7495.2} {RNA815_7352}
15. MligTC455_29574 515 10.73 Mlig455_050384

Neo: -

Age: Down-Down-Up

 TRAF3 0.95 - - - - 0.950 - Mlig455_050384 {REF} {Length: 2521} {Pfam: TRAF-type zinc finger [PF02176.20, score=31.8]; zinc-finger of a C2HC-type [PF13913.8, score=23.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.9]; zf-RING of BARD1-type protein [PF14835.8, score=19.2]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [RH, Score=303, Expect=2e-95]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [RH, Score=301, Expect=8e-95]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [RH, Score=293, Expect=5e-92]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=122, Expect=1e-29]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=101, Expect=9e-23]} {Smed: dd_Smed_v6_4148_0_1, dd_Smed_v6_4148_0_1, [RH, Score=186, Expect=4e-53]} {RNA1509_37811} {RNA1310_11544} {RNA815_4083.1}

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