TomoSeq data search

Data search

Results for MligTC455_29619

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29619

12

0.25

Mlig455_044194

Neo: -

Age: -

Mlig455_044194 {REF} {Length: 6662} {RNA1509_50100} {RNA1310_20046.1} {RNA815_28999}

Cumulative graph for MligTC455_29619

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.831	0.685	0.99974	1.00000
RegionR2	3.585	0.685	0.99984	1.00000
RegionR3	0.087	0.685	0.99989	1.00000
RegionR4	-3.437	0.685	0.99966	1.00000
RegionR5	-1.23	0.685	0.99986	1.00000
RegionR6	0.143	0.685	0.99990	1.00000
RegionR7	1.609	0.685	0.99994	1.00000
RegionR8	2.074	0.685	0.99991	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.567	0.685	0.99986	1.00000
RegenerationR2	2.597	0.685	0.00790	0.14167
RegenerationR3	4.639	0.685	0.00346	0.10476
RegenerationR4	4.169	0.685	0.00546	0.10529
RegenerationR5	4.405	0.685	0.00144	0.06532
RegenerationR6	4.654	0.685	0.00322	0.06654
RegenerationBL	-0.104	0.685	0.99988	1.00000
RegenerationTP	0.228	0.685	0.99989	1.00000

Genes with expression patterns similar to MligTC455_29619

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29619	12	0.25	Mlig455_044194	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_044194 {REF} {Length: 6662} {RNA1509_50100} {RNA1310_20046.1} {RNA815_28999}
2.	MligTC455_35249	23	0.48	Mlig455_044836	Neo: - Age: -		1.698	-	-	-	-	0.707	0.991	Mlig455_044836 {REF} {Length: 1594} {NoTransDecoderORF} {RNA1509_50710} {RNA1310_64063.1, RNA1509_50710} {RNA1509_50710, RNA815_12678.2}
3.	MligTC455_09353	21	0.44	Mlig455_024297	Neo: - Age: -		0.981	-	-	-	-	-	0.981	Mlig455_024297 {REF} {Length: 300} {NoTransDecoderORF} {RNA1509_27479} {RNA1310_122321}
4.	MligTC455_04693	18	0.37	Mlig455_031913	Neo: - Age: -		0.979	-	-	-	-	-	0.979	Mlig455_031913 {REF} {Length: 1676} {NoTransDecoderORF} {RNA1509_7715} {RNA1310_17276.1} {RNA815_2054.1}
5.	MligTC455_13588	43	0.9	Mlig455_070234	Neo: - Age: -		0.974	-	-	-	-	-	0.974	Mlig455_070234 {REF} {Length: 857} {Pfam: Tup N-terminal [PF08581.12, score=24.8]} {RNA1310_118445}
6.	MligTC455_02175	10	0.21	Mlig455_038749	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_038749 {REF} {Length: 689} {NoTransDecoderORF} {RNA1310_91255} {RNA815_48023}
7.	MligTC455_07434	11	0.23	Mlig455_000460	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_000460 {REF} {Length: 396} {NoTransDecoderORF}
8.	MligTC455_25266	1293	26.93	Mlig455_058082	Neo: - Age: logFC(26M/2M)=0.494 Region-enriched R4: 1.940/0.00065	VPS37B	0.963	-	-	-	-	0.963	-	Mlig455_058082 {REF} {Length: 1292} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=81.6]} {Human: ENSG00000139722, VPS37B, VPS37B, ESCRT-I subunit, [RH, Score=78.6, Expect=1e-16]} {Mouse: ENSMUSG00000048832, Vps37c, vacuolar protein sorting 37C, [RH, Score=66.2, Expect=3e-12]; ENSMUSG00000066278, Vps37b, vacuolar protein sorting 37B, [RH, Score=65.5, Expect=4e-12]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [Score=55.1, Expect=6e-09]} {RNA1509_20495, RNA1509_35491, RNA1509_40503, RNA1509_4762} {RNA1310_1499.1, RNA1509_20495, RNA1509_35491, RNA1509_40503, RNA1509_4762} {RNA1509_20495, RNA1509_35491, RNA1509_40503, RNA1509_4762, RNA815_9957}
9.	MligTC455_39274	6	0.12	Mlig455_065105	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_065105 {REF} {Length: 1433} {RNA1310_84541}
10.	MligTC455_39578	62	1.3	Mlig455_062612	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.532 Region-enriched R2: 5.707/0.01250		0.963	-	-	-	-	-	0.963	Mlig455_062612 {REF} {Length: 2100} {Pfam: Domain of unknown function (DUF19) [PF01579.20, score=18.7]} {RNA1509_45897} {RNA1310_21458, RNA1509_45897} {RNA1509_45897, RNA815_13754}
11.	MligTC455_36824	13	0.27	Mlig455_013106	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.555	HSPB6	0.962	-	-	-	-	-	0.962	Mlig455_013106 {REF} {Length: 4507} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=48.8]} {Human: ENSG00000004776, HSPB6, heat shock protein family B (small) member 6, [RH, Score=55.1, Expect=4e-08]} {Mouse: ENSMUSG00000036854, Hspb6, heat shock protein, alpha-crystallin-related, B6, [RH, Score=58.2, Expect=2e-09]} {Dmel: FBgn0261649, tinc, tincar, [RH, Score=98.6, Expect=2e-20]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=134, Expect=6e-32]} {RNA1509_42227} {RNA1310_6823.1} {RNA815_9589}
12.	MligTC455_25265	1284	26.74	Mlig455_058038	Neo: - Age: Down-Up-Down, logFC(26M/2M)=1.082 Region-enriched R4: 1.930/0.00051 Region-enriched R5: 1.049/0.03707	VPS37B	0.959	-	-	-	-	0.959	-	Mlig455_058038 {REF} {Length: 1303} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=81.6]} {Human: ENSG00000139722, VPS37B, VPS37B, ESCRT-I subunit, [RH, Score=79.3, Expect=6e-17]} {Mouse: ENSMUSG00000048832, Vps37c, vacuolar protein sorting 37C, [RH, Score=67.4, Expect=1e-12]; ENSMUSG00000066278, Vps37b, vacuolar protein sorting 37B, [RH, Score=65.9, Expect=2e-12]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [Score=55.5, Expect=4e-09]} {RNA1509_4762} {RNA1310_1499.1} {RNA815_9957}
13.	MligTC455_36024	28	0.59	Mlig455_055284, Mlig455_055330	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_055284 {REF} {Length: 1451} {RNA1509_29082} {RNA1310_61099} {RNA815_29618} Mlig455_055330 {REF} {Length: 1771} {RNA1509_29082} {RNA1310_61099} {RNA815_29618}
14.	MligTC455_06866	19	0.4	Mlig455_021958	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_021958 {REF} {Length: 1274} {NoTransDecoderORF} {RNA1310_77684} {RNA815_54804}

Berezikov Lab - 2020-2021 © ERIBA